RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Camk2n1Q6QWF9 78 aa9.39□□□□□ -0.91
Shank1-201ENSMUST00000107934 Sec61bQ9CQS8 96 aaKnown RBP9.37□□□□□ -0.91
Shank1-201ENSMUST00000107934 Gm9507D3Z5T3 223 aa9.37□□□□□ -0.91
Shank1-201ENSMUST00000107934 Nbeal1E9PYP2 2688 aa9.36□□□□□ -0.91
Shank1-201ENSMUST00000107934 Usp24B1AY13 2617 aaKnown RBP9.35□□□□□ -0.91
Shank1-201ENSMUST00000107934 A730071L15RikQ8C4X0 137 aa9.33□□□□□ -0.92
Shank1-201ENSMUST00000107934 Gm5767A0A0J9YTU8 78 aa9.32□□□□□ -0.92
Shank1-201ENSMUST00000107934 FlnaQ8BTM8 2647 aaKnown RBP9.31□□□□□ -0.92
Shank1-201ENSMUST00000107934 Hectd1Q69ZR2 2618 aaKnown RBP9.3□□□□□ -0.92
Shank1-201ENSMUST00000107934 Krtap13O88375 197 aa9.3□□□□□ -0.92
Shank1-201ENSMUST00000107934 Jbts17Q8CE72 3214 aa9.29□□□□□ -0.92
Shank1-201ENSMUST00000107934 Cep350E9Q309 3095 aa9.28□□□□□ -0.92
Shank1-201ENSMUST00000107934 Prune2Q52KR3 3084 aa9.28□□□□□ -0.92
Shank1-201ENSMUST00000107934 Akap13E9Q394 2776 aa9.25□□□□□ -0.93
Shank1-201ENSMUST00000107934 2310050C09RikG5E8Z3 280 aa9.25□□□□□ -0.93
Shank1-201ENSMUST00000107934 PcntP48725 2898 aa9.22□□□□□ -0.93
Shank1-201ENSMUST00000107934 Lama3Q61789 3330 aa9.19□□□□□ -0.94
Shank1-201ENSMUST00000107934 Krtap10-4Q08EG8 221 aa9.19□□□□□ -0.94
Shank1-201ENSMUST00000107934 Bod1lE9Q6J5 3032 aa9.18□□□□□ -0.94
Shank1-201ENSMUST00000107934 Gcn1E9PVA8 2671 aaKnown RBP9.16□□□□□ -0.94
Shank1-201ENSMUST00000107934 Gm19426M0QWC7 77 aa9.16□□□□□ -0.94
Shank1-201ENSMUST00000107934 Gm3646F6S692 53 aa9.13□□□□□ -0.95
Shank1-201ENSMUST00000107934 Rpl37Q9D823 97 aa9.11□□□□□ -0.95
Shank1-201ENSMUST00000107934 BC029722A0A0N4SW31 51 aa9.11□□□□□ -0.95
Shank1-201ENSMUST00000107934 Krtap14O08640 167 aa9.09□□□□□ -0.95
Shank1-201ENSMUST00000107934 Romo1P60603 79 aa9.08□□□□□ -0.96
Shank1-201ENSMUST00000107934 Col12a1Q60847 3120 aa9.08□□□□□ -0.96
Shank1-201ENSMUST00000107934 Krtap10-10A0A1W2P7T6 217 aa9.07□□□□□ -0.96
Shank1-201ENSMUST00000107934 TrioQ0KL02 3102 aa9.07□□□□□ -0.96
Shank1-201ENSMUST00000107934 2310061N02RikQ9D6S9 174 aa9.06□□□□□ -0.96
Shank1-201ENSMUST00000107934 Fn1P11276 2477 aaKnown RBP9.04□□□□□ -0.96
Shank1-201ENSMUST00000107934 Usp34Q6ZQ93 3582 aa9.04□□□□□ -0.96
Shank1-201ENSMUST00000107934 Igsf10Q3V1M1 2594 aa9.01□□□□□ -0.97
Shank1-201ENSMUST00000107934 HrnrQ8VHD8 2496 aa8.99□□□□□ -0.97
Shank1-201ENSMUST00000107934 Gm2310J3QNJ2 377 aa8.96□□□□□ -0.98
Shank1-201ENSMUST00000107934 Gm10382Q3V0T5 144 aa8.95□□□□□ -0.98
Shank1-201ENSMUST00000107934 Rev3lQ61493 3122 aa8.95□□□□□ -0.98
Shank1-201ENSMUST00000107934 Stab1Q8R4Y4 2571 aa8.94□□□□□ -0.98
Shank1-201ENSMUST00000107934 Lama2Q60675 3118 aaKnown RBP8.94□□□□□ -0.98
Shank1-201ENSMUST00000107934 Rps29P62274 56 aa8.94□□□□□ -0.98
Shank1-201ENSMUST00000107934 Itpr3P70227 2670 aa8.93□□□□□ -0.98
Shank1-201ENSMUST00000107934 Notch1Q01705 2531 aa8.92□□□□□ -0.98
Shank1-201ENSMUST00000107934 Prrc2cQ3TLH4 2846 aaKnown RBP8.92□□□□□ -0.98
Shank1-201ENSMUST00000107934 Chd7A2AJK6 2986 aaKnown RBP8.91□□□□□ -0.98
Shank1-201ENSMUST00000107934 Myo15bI7HPW8 3033 aa8.91□□□□□ -0.98
Shank1-201ENSMUST00000107934 Itpr1P11881 2749 aa8.9□□□□□ -0.98
Shank1-201ENSMUST00000107934 1700042G07RikB1AUF7 90 aa8.89□□□□□ -0.99
Shank1-201ENSMUST00000107934 Tnp2P11378 117 aa8.89□□□□□ -0.99
Shank1-201ENSMUST00000107934 Mast4Q811L6 2618 aa8.88□□□□□ -0.99
Shank1-201ENSMUST00000107934 Gm2696A0A1W2P709 240 aa8.85□□□□□ -0.99
Shank1-201ENSMUST00000107934 HttP42859 3119 aa8.84□□□□□ -0.99
Shank1-201ENSMUST00000107934 Mki67E9PVX6 3177 aaKnown RBP8.84□□□□□ -0.99
Shank1-201ENSMUST00000107934 4933415A04RikQ9D443 101 aa8.84□□□□□ -1
Shank1-201ENSMUST00000107934 Tnrc18Q80WC3 2878 aa8.83□□□□□ -1
Shank1-201ENSMUST00000107934 MgaA2AWL7 3003 aaKnown RBP8.82□□□□□ -1
Shank1-201ENSMUST00000107934 Cdh23Q99PF4 3354 aa8.77□□□□□ -1.01
Shank1-201ENSMUST00000107934 Cox6b2Q80ZN9 88 aa8.74□□□□□ -1.01
Shank1-201ENSMUST00000107934 Gm7173A0A0G2JEB6 3132 aa8.73□□□□□ -1.01
Shank1-201ENSMUST00000107934 Ranbp2Q9ERU9 3053 aaKnown RBP8.73□□□□□ -1.01
Shank1-201ENSMUST00000107934 Dmxl1Q6PNC0 3013 aa8.72□□□□□ -1.01
Shank1-201ENSMUST00000107934 Map1aQ9QYR6 2776 aa8.71□□□□□ -1.01
Shank1-201ENSMUST00000107934 NipblQ6KCD5 2798 aaKnown RBP8.68□□□□□ -1.02
Shank1-201ENSMUST00000107934 9530053A07RikE9PVG8 2581 aa8.67□□□□□ -1.02
Shank1-201ENSMUST00000107934 Ash1lQ99MY8 2958 aa8.64□□□□□ -1.03
Shank1-201ENSMUST00000107934 D6Ertd527eA0A0N4SWI3 464 aa8.63□□□□□ -1.03
Shank1-201ENSMUST00000107934 Fbn2Q61555 2907 aa8.63□□□□□ -1.03
Shank1-201ENSMUST00000107934 Chd6A3KFM7 2711 aa8.62□□□□□ -1.03
Shank1-201ENSMUST00000107934 Ndufaf8A2AMZ4 74 aa8.6□□□□□ -1.03
Shank1-201ENSMUST00000107934 Ubr5Q80TP3 2792 aa8.6□□□□□ -1.03
Shank1-201ENSMUST00000107934 Gm5965D3Z724 196 aa8.59□□□□□ -1.03
Shank1-201ENSMUST00000107934 Tep1P97499 2629 aa8.58□□□□□ -1.04
Shank1-201ENSMUST00000107934 2310057N15RikQ9D6T8 200 aa8.58□□□□□ -1.04
Shank1-201ENSMUST00000107934 Gm21887J3QQ04 176 aa8.57□□□□□ -1.04
Shank1-201ENSMUST00000107934 Nbeal2Q6ZQA0 2742 aa8.56□□□□□ -1.04
Shank1-201ENSMUST00000107934 KalrnA2CG49 2964 aa8.53□□□□□ -1.04
Shank1-201ENSMUST00000107934 Szt2A2A9C3 3431 aa8.52□□□□□ -1.05
Shank1-201ENSMUST00000107934 Zfhx3Q61329 3726 aa8.51□□□□□ -1.05
Shank1-201ENSMUST00000107934 Kmt2bO08550 2713 aa8.49□□□□□ -1.05
Shank1-201ENSMUST00000107934 SmcpP15265 143 aa8.49□□□□□ -1.05
Shank1-201ENSMUST00000107934 Gm9112A2AI92 75 aa8.48□□□□□ -1.05
Shank1-201ENSMUST00000107934 Cfap54Q8C6S9 3106 aa8.46□□□□□ -1.06
Shank1-201ENSMUST00000107934 Unc80Q8BLN6 3261 aa8.46□□□□□ -1.06
Shank1-201ENSMUST00000107934 Col6a5A6H584 2640 aa8.45□□□□□ -1.06
Shank1-201ENSMUST00000107934 Pkd1l1Q8R526 2615 aa8.43□□□□□ -1.06
Shank1-201ENSMUST00000107934 Muc2Q80Z19 2680 aa8.39□□□□□ -1.07
Shank1-201ENSMUST00000107934 Celsr1O35161 3034 aa8.39□□□□□ -1.07
Shank1-201ENSMUST00000107934 Vps13aQ5H8C4 3166 aa8.38□□□□□ -1.07
Shank1-201ENSMUST00000107934 Celsr3Q91ZI0 3301 aa8.37□□□□□ -1.07
Shank1-201ENSMUST00000107934 Stab2Q8R4U0 2559 aa8.36□□□□□ -1.07
Shank1-201ENSMUST00000107934 BptfA2A654 3036 aaKnown RBP8.36□□□□□ -1.07
Shank1-201ENSMUST00000107934 Itpr2Q9Z329 2701 aa8.35□□□□□ -1.07
Shank1-201ENSMUST00000107934 AtmQ62388 3066 aa8.32□□□□□ -1.08
Shank1-201ENSMUST00000107934 Igfn1Q3KNY0 2849 aa8.31□□□□□ -1.08
Shank1-201ENSMUST00000107934 A930033H14RikG5E8X6 103 aa8.29□□□□□ -1.08
Shank1-201ENSMUST00000107934 Tnp1P10856 55 aa8.29□□□□□ -1.08
Shank1-201ENSMUST00000107934 Hivep1Q03172 2688 aa8.26□□□□□ -1.09
Shank1-201ENSMUST00000107934 Utp20Q5XG71 2788 aaKnown RBP8.26□□□□□ -1.09
Shank1-201ENSMUST00000107934 Lrrc37aB1AWG4 3215 aa8.25□□□□□ -1.09
Shank1-201ENSMUST00000107934 Tenm4Q3UHK6 2771 aa8.23□□□□□ -1.09
Shank1-201ENSMUST00000107934 AspmQ8CJ27 3122 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 88.5 ms