RNA–Protein interactions for RNA: ENSMUST00000106550.10

Knop1-204, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Knop1, Length 5,524 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-204ENSMUST00000106550 Usp24B1AY13 2617 aaKnown RBP8.44□□□□□ -1.06
Knop1-204ENSMUST00000106550 Spink7Q6IE32 76 aa8.44□□□□□ -1.06
Knop1-204ENSMUST00000106550 A730071L15RikQ8C4X0 137 aa8.44□□□□□ -1.06
Knop1-204ENSMUST00000106550 Krtap15-1Q9QZU5 150 aa8.42□□□□□ -1.06
Knop1-204ENSMUST00000106550 Gm37013Q8K491 104 aa8.41□□□□□ -1.06
Knop1-204ENSMUST00000106550 Gm16253D3Z167 63 aa8.41□□□□□ -1.06
Knop1-204ENSMUST00000106550 Hectd1Q69ZR2 2618 aaKnown RBP8.39□□□□□ -1.07
Knop1-204ENSMUST00000106550 TrioQ0KL02 3102 aa8.37□□□□□ -1.07
Knop1-204ENSMUST00000106550 Jbts17Q8CE72 3214 aa8.35□□□□□ -1.07
Knop1-204ENSMUST00000106550 Prrc2cQ3TLH4 2846 aaKnown RBP8.34□□□□□ -1.07
Knop1-204ENSMUST00000106550 Krtap29-1A2A5X4 342 aa8.34□□□□□ -1.08
Knop1-204ENSMUST00000106550 HrnrQ8VHD8 2496 aa8.3□□□□□ -1.08
Knop1-204ENSMUST00000106550 Bod1lE9Q6J5 3032 aa8.28□□□□□ -1.08
Knop1-204ENSMUST00000106550 Fn1P11276 2477 aaKnown RBP8.27□□□□□ -1.09
Knop1-204ENSMUST00000106550 Lama3Q61789 3330 aa8.26□□□□□ -1.09
Knop1-204ENSMUST00000106550 Notch1Q01705 2531 aa8.26□□□□□ -1.09
Knop1-204ENSMUST00000106550 Tnrc18Q80WC3 2878 aa8.24□□□□□ -1.09
Knop1-204ENSMUST00000106550 Gm3646F6S692 53 aa8.24□□□□□ -1.09
Knop1-204ENSMUST00000106550 Stab1Q8R4Y4 2571 aa8.23□□□□□ -1.09
Knop1-204ENSMUST00000106550 Fam229aB2KGE5 128 aa8.22□□□□□ -1.09
Knop1-204ENSMUST00000106550 Col12a1Q60847 3120 aa8.21□□□□□ -1.09
Knop1-204ENSMUST00000106550 Chd7A2AJK6 2986 aaKnown RBP8.2□□□□□ -1.1
Knop1-204ENSMUST00000106550 Map1aQ9QYR6 2776 aa8.19□□□□□ -1.1
Knop1-204ENSMUST00000106550 Gm9507D3Z5T3 223 aa8.18□□□□□ -1.1
Knop1-204ENSMUST00000106550 Gm5767A0A0J9YTU8 78 aa8.17□□□□□ -1.1
Knop1-204ENSMUST00000106550 Krtap13O88375 197 aa8.17□□□□□ -1.1
Knop1-204ENSMUST00000106550 Camk2n1Q6QWF9 78 aa8.17□□□□□ -1.1
Knop1-204ENSMUST00000106550 2310050C09RikG5E8Z3 280 aa8.17□□□□□ -1.1
Knop1-204ENSMUST00000106550 Sec61bQ9CQS8 96 aaKnown RBP8.14□□□□□ -1.11
Knop1-204ENSMUST00000106550 NipblQ6KCD5 2798 aaKnown RBP8.14□□□□□ -1.11
Knop1-204ENSMUST00000106550 Itpr1P11881 2749 aa8.12□□□□□ -1.11
Knop1-204ENSMUST00000106550 Lama2Q60675 3118 aaKnown RBP8.11□□□□□ -1.11
Knop1-204ENSMUST00000106550 Mki67E9PVX6 3177 aaKnown RBP8.11□□□□□ -1.11
Knop1-204ENSMUST00000106550 Rpl37Q9D823 97 aa8.09□□□□□ -1.11
Knop1-204ENSMUST00000106550 Rev3lQ61493 3122 aa8.08□□□□□ -1.12
Knop1-204ENSMUST00000106550 Usp34Q6ZQ93 3582 aa8.07□□□□□ -1.12
Knop1-204ENSMUST00000106550 HttP42859 3119 aa8.06□□□□□ -1.12
Knop1-204ENSMUST00000106550 MgaA2AWL7 3003 aaKnown RBP8.06□□□□□ -1.12
Knop1-204ENSMUST00000106550 Romo1P60603 79 aa8.06□□□□□ -1.12
Knop1-204ENSMUST00000106550 Krtap14O08640 167 aa8.06□□□□□ -1.12
Knop1-204ENSMUST00000106550 Itpr3P70227 2670 aa8.06□□□□□ -1.12
Knop1-204ENSMUST00000106550 2310061N02RikQ9D6S9 174 aa8.05□□□□□ -1.12
Knop1-204ENSMUST00000106550 Myo15bI7HPW8 3033 aa8.04□□□□□ -1.12
Knop1-204ENSMUST00000106550 Gm2310J3QNJ2 377 aa8.04□□□□□ -1.12
Knop1-204ENSMUST00000106550 Mast4Q811L6 2618 aa8.04□□□□□ -1.12
Knop1-204ENSMUST00000106550 Krtap10-4Q08EG8 221 aa8.04□□□□□ -1.12
Knop1-204ENSMUST00000106550 4933415A04RikQ9D443 101 aa8.03□□□□□ -1.12
Knop1-204ENSMUST00000106550 Akap13E9Q394 2776 aa8.02□□□□□ -1.12
Knop1-204ENSMUST00000106550 Gm7173A0A0G2JEB6 3132 aa8.02□□□□□ -1.13
Knop1-204ENSMUST00000106550 Fbn2Q61555 2907 aa8.02□□□□□ -1.13
Knop1-204ENSMUST00000106550 Dmxl1Q6PNC0 3013 aa8.02□□□□□ -1.13
Knop1-204ENSMUST00000106550 Ash1lQ99MY8 2958 aa8.01□□□□□ -1.13
Knop1-204ENSMUST00000106550 BC029722A0A0N4SW31 51 aa8.01□□□□□ -1.13
Knop1-204ENSMUST00000106550 Kmt2bO08550 2713 aa8□□□□□ -1.13
Knop1-204ENSMUST00000106550 Gm19426M0QWC7 77 aa7.97□□□□□ -1.13
Knop1-204ENSMUST00000106550 Chd6A3KFM7 2711 aa7.97□□□□□ -1.13
Knop1-204ENSMUST00000106550 Ranbp2Q9ERU9 3053 aaKnown RBP7.95□□□□□ -1.14
Knop1-204ENSMUST00000106550 Gm10382Q3V0T5 144 aa7.94□□□□□ -1.14
Knop1-204ENSMUST00000106550 Igsf10Q3V1M1 2594 aa7.93□□□□□ -1.14
Knop1-204ENSMUST00000106550 Krtap10-10A0A1W2P7T6 217 aa7.93□□□□□ -1.14
Knop1-204ENSMUST00000106550 Tep1P97499 2629 aa7.93□□□□□ -1.14
Knop1-204ENSMUST00000106550 1700042G07RikB1AUF7 90 aa7.92□□□□□ -1.14
Knop1-204ENSMUST00000106550 Ubr5Q80TP3 2792 aa7.91□□□□□ -1.14
Knop1-204ENSMUST00000106550 Tnp2P11378 117 aa7.91□□□□□ -1.14
Knop1-204ENSMUST00000106550 Rps29P62274 56 aa7.91□□□□□ -1.14
Knop1-204ENSMUST00000106550 KalrnA2CG49 2964 aa7.9□□□□□ -1.14
Knop1-204ENSMUST00000106550 SmcpP15265 143 aa7.9□□□□□ -1.14
Knop1-204ENSMUST00000106550 Cdh23Q99PF4 3354 aa7.86□□□□□ -1.15
Knop1-204ENSMUST00000106550 Cfap54Q8C6S9 3106 aa7.82□□□□□ -1.16
Knop1-204ENSMUST00000106550 Stab2Q8R4U0 2559 aa7.81□□□□□ -1.16
Knop1-204ENSMUST00000106550 Nbeal2Q6ZQA0 2742 aa7.81□□□□□ -1.16
Knop1-204ENSMUST00000106550 9530053A07RikE9PVG8 2581 aa7.81□□□□□ -1.16
Knop1-204ENSMUST00000106550 Cox6b2Q80ZN9 88 aa7.8□□□□□ -1.16
Knop1-204ENSMUST00000106550 Muc2Q80Z19 2680 aa7.76□□□□□ -1.17
Knop1-204ENSMUST00000106550 Gm2696A0A1W2P709 240 aa7.73□□□□□ -1.17
Knop1-204ENSMUST00000106550 D6Ertd527eA0A0N4SWI3 464 aa7.72□□□□□ -1.17
Knop1-204ENSMUST00000106550 Celsr1O35161 3034 aa7.69□□□□□ -1.18
Knop1-204ENSMUST00000106550 Pkd1l1Q8R526 2615 aa7.68□□□□□ -1.18
Knop1-204ENSMUST00000106550 Szt2A2A9C3 3431 aa7.66□□□□□ -1.18
Knop1-204ENSMUST00000106550 Vps13aQ5H8C4 3166 aa7.65□□□□□ -1.19
Knop1-204ENSMUST00000106550 Itpr2Q9Z329 2701 aa7.64□□□□□ -1.19
Knop1-204ENSMUST00000106550 Col6a5A6H584 2640 aa7.64□□□□□ -1.19
Knop1-204ENSMUST00000106550 AtmQ62388 3066 aa7.63□□□□□ -1.19
Knop1-204ENSMUST00000106550 Hivep1Q03172 2688 aa7.6□□□□□ -1.19
Knop1-204ENSMUST00000106550 Utp20Q5XG71 2788 aaKnown RBP7.6□□□□□ -1.19
Knop1-204ENSMUST00000106550 BptfA2A654 3036 aaKnown RBP7.59□□□□□ -1.19
Knop1-204ENSMUST00000106550 AspmQ8CJ27 3122 aa7.58□□□□□ -1.2
Knop1-204ENSMUST00000106550 Lrrc37aB1AWG4 3215 aa7.56□□□□□ -1.2
Knop1-204ENSMUST00000106550 Gm5965D3Z724 196 aa7.53□□□□□ -1.2
Knop1-204ENSMUST00000106550 Celsr3Q91ZI0 3301 aa7.53□□□□□ -1.2
Knop1-204ENSMUST00000106550 Unc80Q8BLN6 3261 aa7.52□□□□□ -1.21
Knop1-204ENSMUST00000106550 TgO08710 2766 aa7.52□□□□□ -1.21
Knop1-204ENSMUST00000106550 Gm21887J3QQ04 176 aa7.51□□□□□ -1.21
Knop1-204ENSMUST00000106550 FcgbpE9Q0B5 2583 aa7.5□□□□□ -1.21
Knop1-204ENSMUST00000106550 Adgrg4B7ZCC9 3073 aa7.49□□□□□ -1.21
Knop1-204ENSMUST00000106550 Frem2Q6NVD0 3160 aa7.49□□□□□ -1.21
Knop1-204ENSMUST00000106550 Tex15F8VPN2 2785 aa7.47□□□□□ -1.21
Knop1-204ENSMUST00000106550 NbeaQ9EPN1 2936 aa7.44□□□□□ -1.22
Knop1-204ENSMUST00000106550 Srrm2Q8BTI8 2703 aaKnown RBP7.44□□□□□ -1.22
Knop1-204ENSMUST00000106550 Wdfy4E9Q2M9 3149 aa7.44□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms