RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 AtrQ9JKK8 2635 aa8.82□□□□□ -1
Pcdha1-201ENSMUST00000070797 Lelp1Q9DAE3 120 aa8.81□□□□□ -1
Pcdha1-201ENSMUST00000070797 Lama3Q61789 3330 aa8.81□□□□□ -1
Pcdha1-201ENSMUST00000070797 TrioQ0KL02 3102 aa8.81□□□□□ -1
Pcdha1-201ENSMUST00000070797 Rpl37Q9D823 97 aa8.78□□□□□ -1
Pcdha1-201ENSMUST00000070797 Gm7138L7N2C3 230 aa8.73□□□□□ -1.01
Pcdha1-201ENSMUST00000070797 Gm3238W4VSP7 230 aa8.73□□□□□ -1.01
Pcdha1-201ENSMUST00000070797 Hectd1Q69ZR2 2618 aaKnown RBP8.73□□□□□ -1.01
Pcdha1-201ENSMUST00000070797 Mki67E9PVX6 3177 aaKnown RBP8.71□□□□□ -1.01
Pcdha1-201ENSMUST00000070797 Usp24B1AY13 2617 aaKnown RBP8.69□□□□□ -1.02
Pcdha1-201ENSMUST00000070797 Gm10382Q3V0T5 144 aa8.67□□□□□ -1.02
Pcdha1-201ENSMUST00000070797 FlnaQ8BTM8 2647 aaKnown RBP8.67□□□□□ -1.02
Pcdha1-201ENSMUST00000070797 Gm7137J3QMW1 236 aa8.66□□□□□ -1.02
Pcdha1-201ENSMUST00000070797 Col12a1Q60847 3120 aa8.64□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Map1aQ9QYR6 2776 aa8.62□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Gcn1E9PVA8 2671 aaKnown RBP8.62□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Cox6b2Q80ZN9 88 aa8.62□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Lama2Q60675 3118 aaKnown RBP8.62□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Prune2Q52KR3 3084 aa8.62□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Fn1P11276 2477 aaKnown RBP8.62□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Cfap54Q8C6S9 3106 aa8.61□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Gm9195A0A140LHT4 2805 aa8.59□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Prrc2cQ3TLH4 2846 aaKnown RBP8.59□□□□□ -1.03
Pcdha1-201ENSMUST00000070797 Krtap29-1A2A5X4 342 aa8.58□□□□□ -1.04
Pcdha1-201ENSMUST00000070797 Nsd1O88491 2588 aaKnown RBP8.56□□□□□ -1.04
Pcdha1-201ENSMUST00000070797 Cdh23Q99PF4 3354 aa8.55□□□□□ -1.04
Pcdha1-201ENSMUST00000070797 Fam229aB2KGE5 128 aa8.54□□□□□ -1.04
Pcdha1-201ENSMUST00000070797 Notch1Q01705 2531 aa8.54□□□□□ -1.04
Pcdha1-201ENSMUST00000070797 Rev3lQ61493 3122 aa8.54□□□□□ -1.04
Pcdha1-201ENSMUST00000070797 Jbts17Q8CE72 3214 aa8.53□□□□□ -1.04
Pcdha1-201ENSMUST00000070797 Itpr1P11881 2749 aa8.5□□□□□ -1.05
Pcdha1-201ENSMUST00000070797 Gm17349F7BGH6 99 aa8.5□□□□□ -1.05
Pcdha1-201ENSMUST00000070797 Spink7Q6IE32 76 aa8.49□□□□□ -1.05
Pcdha1-201ENSMUST00000070797 Bod1lE9Q6J5 3032 aa8.48□□□□□ -1.05
Pcdha1-201ENSMUST00000070797 Akap13E9Q394 2776 aa8.47□□□□□ -1.05
Pcdha1-201ENSMUST00000070797 Krtap14O08640 167 aa8.47□□□□□ -1.05
Pcdha1-201ENSMUST00000070797 HrnrQ8VHD8 2496 aa8.45□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Camk2n1Q6QWF9 78 aa8.45□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Kmt2bO08550 2713 aa8.44□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Ndufaf8A2AMZ4 74 aa8.43□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Stab1Q8R4Y4 2571 aa8.43□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Gm36176A0A1W2P8D5 158 aa8.43□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Myo15bI7HPW8 3033 aa8.43□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Gm9508A0A1W2P7W0 230 aa8.42□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Szt2A2A9C3 3431 aa8.41□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 2310050C09RikG5E8Z3 280 aa8.41□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Gm19426M0QWC7 77 aa8.41□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Ranbp2Q9ERU9 3053 aaKnown RBP8.41□□□□□ -1.06
Pcdha1-201ENSMUST00000070797 Gm7173A0A0G2JEB6 3132 aa8.39□□□□□ -1.07
Pcdha1-201ENSMUST00000070797 Mast4Q811L6 2618 aa8.39□□□□□ -1.07
Pcdha1-201ENSMUST00000070797 NipblQ6KCD5 2798 aaKnown RBP8.37□□□□□ -1.07
Pcdha1-201ENSMUST00000070797 Gm5767A0A0J9YTU8 78 aa8.36□□□□□ -1.07
Pcdha1-201ENSMUST00000070797 Krtap15-1Q9QZU5 150 aa8.36□□□□□ -1.07
Pcdha1-201ENSMUST00000070797 D6Ertd527eA0A0N4SWI3 464 aa8.34□□□□□ -1.07
Pcdha1-201ENSMUST00000070797 BC029722A0A0N4SW31 51 aa8.33□□□□□ -1.08
Pcdha1-201ENSMUST00000070797 Igsf10Q3V1M1 2594 aa8.32□□□□□ -1.08
Pcdha1-201ENSMUST00000070797 Rps29P62274 56 aa8.32□□□□□ -1.08
Pcdha1-201ENSMUST00000070797 Chd6A3KFM7 2711 aa8.31□□□□□ -1.08
Pcdha1-201ENSMUST00000070797 Unc80Q8BLN6 3261 aa8.31□□□□□ -1.08
Pcdha1-201ENSMUST00000070797 Dmxl1Q6PNC0 3013 aa8.3□□□□□ -1.08
Pcdha1-201ENSMUST00000070797 MgaA2AWL7 3003 aaKnown RBP8.29□□□□□ -1.08
Pcdha1-201ENSMUST00000070797 Fbn2Q61555 2907 aa8.28□□□□□ -1.08
Pcdha1-201ENSMUST00000070797 Vps13aQ5H8C4 3166 aa8.25□□□□□ -1.09
Pcdha1-201ENSMUST00000070797 Itpr3P70227 2670 aa8.23□□□□□ -1.09
Pcdha1-201ENSMUST00000070797 Tnp2P11378 117 aa8.22□□□□□ -1.09
Pcdha1-201ENSMUST00000070797 Ubr5Q80TP3 2792 aa8.2□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 Ash1lQ99MY8 2958 aa8.19□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 Gm40193A0A1B0GT39 78 aa8.19□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 2310061N02RikQ9D6S9 174 aa8.19□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 Gm9112A2AI92 75 aa8.18□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 KalrnA2CG49 2964 aa8.17□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 Krtap13O88375 197 aa8.17□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 FrylF8VQ05 3007 aa8.15□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 Sec61bQ9CQS8 96 aaKnown RBP8.15□□□□□ -1.1
Pcdha1-201ENSMUST00000070797 Frem2Q6NVD0 3160 aa8.14□□□□□ -1.11
Pcdha1-201ENSMUST00000070797 Lama1P19137 3084 aa8.1□□□□□ -1.11
Pcdha1-201ENSMUST00000070797 AtmQ62388 3066 aa8.1□□□□□ -1.11
Pcdha1-201ENSMUST00000070797 9530053A07RikE9PVG8 2581 aa8.08□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 Gm20537G3UYK7 97 aa8.08□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 Tep1P97499 2629 aa8.07□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 Lrrc37aB1AWG4 3215 aa8.07□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 Celsr1O35161 3034 aa8.06□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 AspmQ8CJ27 3122 aa8.06□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 Celsr3Q91ZI0 3301 aa8.05□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 Wdfy4E9Q2M9 3149 aa8.05□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 Gm9507D3Z5T3 223 aa8.03□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 Pkd1l1Q8R526 2615 aa8.03□□□□□ -1.12
Pcdha1-201ENSMUST00000070797 BptfA2A654 3036 aaKnown RBP8.02□□□□□ -1.13
Pcdha1-201ENSMUST00000070797 FryE9Q8I9 3020 aa8.02□□□□□ -1.13
Pcdha1-201ENSMUST00000070797 Col6a5A6H584 2640 aa8.02□□□□□ -1.13
Pcdha1-201ENSMUST00000070797 Stab2Q8R4U0 2559 aa8□□□□□ -1.13
Pcdha1-201ENSMUST00000070797 Muc2Q80Z19 2680 aa8□□□□□ -1.13
Pcdha1-201ENSMUST00000070797 Nbeal2Q6ZQA0 2742 aa7.97□□□□□ -1.13
Pcdha1-201ENSMUST00000070797 A930033H14RikG5E8X6 103 aa7.93□□□□□ -1.14
Pcdha1-201ENSMUST00000070797 Wdfy3Q6VNB8 3508 aa7.93□□□□□ -1.14
Pcdha1-201ENSMUST00000070797 2310079G19RikQ9D6L6 185 aa7.9□□□□□ -1.14
Pcdha1-201ENSMUST00000070797 DspE9Q557 2883 aaKnown RBP7.89□□□□□ -1.15
Pcdha1-201ENSMUST00000070797 Zzef1Q5SSH7 2924 aa7.89□□□□□ -1.15
Pcdha1-201ENSMUST00000070797 Hivep1Q03172 2688 aa7.88□□□□□ -1.15
Pcdha1-201ENSMUST00000070797 Gm21887J3QQ04 176 aa7.88□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 78.8 ms