RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Krtap29-1A2A5X4 342 aa8.85□□□□□ -0.99
Pcdh20-201ENSMUST00000061628 Kmt2bO08550 2713 aa8.84□□□□□ -0.99
Pcdh20-201ENSMUST00000061628 HrnrQ8VHD8 2496 aa8.81□□□□□ -1
Pcdh20-201ENSMUST00000061628 Sec61bQ9CQS8 96 aaKnown RBP8.81□□□□□ -1
Pcdh20-201ENSMUST00000061628 Camk2n1Q6QWF9 78 aa8.79□□□□□ -1
Pcdh20-201ENSMUST00000061628 Hectd1Q69ZR2 2618 aaKnown RBP8.79□□□□□ -1
Pcdh20-201ENSMUST00000061628 Rpl37Q9D823 97 aa8.77□□□□□ -1.01
Pcdh20-201ENSMUST00000061628 Gm5767A0A0J9YTU8 78 aa8.76□□□□□ -1.01
Pcdh20-201ENSMUST00000061628 Stab1Q8R4Y4 2571 aa8.75□□□□□ -1.01
Pcdh20-201ENSMUST00000061628 NipblQ6KCD5 2798 aaKnown RBP8.72□□□□□ -1.01
Pcdh20-201ENSMUST00000061628 Romo1P60603 79 aa8.71□□□□□ -1.02
Pcdh20-201ENSMUST00000061628 Gm9508A0A1W2P7W0 230 aa8.7□□□□□ -1.02
Pcdh20-201ENSMUST00000061628 BC029722A0A0N4SW31 51 aa8.66□□□□□ -1.02
Pcdh20-201ENSMUST00000061628 4933415A04RikQ9D443 101 aa8.65□□□□□ -1.02
Pcdh20-201ENSMUST00000061628 Gm36176A0A1W2P8D5 158 aa8.65□□□□□ -1.03
Pcdh20-201ENSMUST00000061628 Rps29P62274 56 aa8.62□□□□□ -1.03
Pcdh20-201ENSMUST00000061628 Akap13E9Q394 2776 aa8.61□□□□□ -1.03
Pcdh20-201ENSMUST00000061628 2310050C09RikG5E8Z3 280 aa8.6□□□□□ -1.03
Pcdh20-201ENSMUST00000061628 1700042G07RikB1AUF7 90 aa8.6□□□□□ -1.03
Pcdh20-201ENSMUST00000061628 Gm2310J3QNJ2 377 aa8.59□□□□□ -1.03
Pcdh20-201ENSMUST00000061628 Ep400Q8CHI8 3072 aaKnown RBP8.57□□□□□ -1.04
Pcdh20-201ENSMUST00000061628 Prrc2cQ3TLH4 2846 aaKnown RBP8.56□□□□□ -1.04
Pcdh20-201ENSMUST00000061628 Mast4Q811L6 2618 aa8.55□□□□□ -1.04
Pcdh20-201ENSMUST00000061628 Gm10382Q3V0T5 144 aa8.55□□□□□ -1.04
Pcdh20-201ENSMUST00000061628 PcntP48725 2898 aa8.55□□□□□ -1.04
Pcdh20-201ENSMUST00000061628 Gm19426M0QWC7 77 aa8.55□□□□□ -1.04
Pcdh20-201ENSMUST00000061628 Cox6b2Q80ZN9 88 aa8.52□□□□□ -1.04
Pcdh20-201ENSMUST00000061628 Krtap13O88375 197 aa8.5□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 SmcpP15265 143 aa8.49□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 Map1aQ9QYR6 2776 aa8.49□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 2310061N02RikQ9D6S9 174 aa8.48□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 Chd6A3KFM7 2711 aa8.48□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 Krtap14O08640 167 aa8.47□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 Itpr1P11881 2749 aa8.47□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 Igsf10Q3V1M1 2594 aa8.47□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 Itpr3P70227 2670 aa8.46□□□□□ -1.05
Pcdh20-201ENSMUST00000061628 Tep1P97499 2629 aa8.46□□□□□ -1.06
Pcdh20-201ENSMUST00000061628 Tnp2P11378 117 aa8.44□□□□□ -1.06
Pcdh20-201ENSMUST00000061628 Golgb1E9PVZ8 3238 aa8.42□□□□□ -1.06
Pcdh20-201ENSMUST00000061628 Stab2Q8R4U0 2559 aa8.41□□□□□ -1.06
Pcdh20-201ENSMUST00000061628 Gm42715A0A087WP63 3095 aaKnown RBP8.38□□□□□ -1.07
Pcdh20-201ENSMUST00000061628 9530053A07RikE9PVG8 2581 aa8.38□□□□□ -1.07
Pcdh20-201ENSMUST00000061628 Tnrc18Q80WC3 2878 aa8.37□□□□□ -1.07
Pcdh20-201ENSMUST00000061628 Dnah12Q3V0Q1 3086 aa8.36□□□□□ -1.07
Pcdh20-201ENSMUST00000061628 Prune2Q52KR3 3084 aa8.36□□□□□ -1.07
Pcdh20-201ENSMUST00000061628 Ubr5Q80TP3 2792 aa8.3□□□□□ -1.08
Pcdh20-201ENSMUST00000061628 Gm9507D3Z5T3 223 aa8.29□□□□□ -1.08
Pcdh20-201ENSMUST00000061628 D6Ertd527eA0A0N4SWI3 464 aa8.26□□□□□ -1.09
Pcdh20-201ENSMUST00000061628 Myo15bI7HPW8 3033 aa8.25□□□□□ -1.09
Pcdh20-201ENSMUST00000061628 Pkd1l1Q8R526 2615 aa8.2□□□□□ -1.1
Pcdh20-201ENSMUST00000061628 Cep350E9Q309 3095 aa8.17□□□□□ -1.1
Pcdh20-201ENSMUST00000061628 Col6a5A6H584 2640 aa8.14□□□□□ -1.11
Pcdh20-201ENSMUST00000061628 MgaA2AWL7 3003 aaKnown RBP8.14□□□□□ -1.11
Pcdh20-201ENSMUST00000061628 Krtap10-4Q08EG8 221 aa8.14□□□□□ -1.11
Pcdh20-201ENSMUST00000061628 Chd7A2AJK6 2986 aaKnown RBP8.13□□□□□ -1.11
Pcdh20-201ENSMUST00000061628 Nbeal2Q6ZQA0 2742 aa8.13□□□□□ -1.11
Pcdh20-201ENSMUST00000061628 Fbn2Q61555 2907 aa8.11□□□□□ -1.11
Pcdh20-201ENSMUST00000061628 FcgbpE9Q0B5 2583 aa8.09□□□□□ -1.11
Pcdh20-201ENSMUST00000061628 Ash1lQ99MY8 2958 aa8.08□□□□□ -1.12
Pcdh20-201ENSMUST00000061628 Muc2Q80Z19 2680 aa8.06□□□□□ -1.12
Pcdh20-201ENSMUST00000061628 Dmxl1Q6PNC0 3013 aa8.06□□□□□ -1.12
Pcdh20-201ENSMUST00000061628 Gm21887J3QQ04 176 aa8.05□□□□□ -1.12
Pcdh20-201ENSMUST00000061628 Gm40193A0A1B0GT39 78 aa8.03□□□□□ -1.12
Pcdh20-201ENSMUST00000061628 Krtap10-10A0A1W2P7T6 217 aa8.03□□□□□ -1.12
Pcdh20-201ENSMUST00000061628 Hivep1Q03172 2688 aa8.01□□□□□ -1.13
Pcdh20-201ENSMUST00000061628 Bod1lE9Q6J5 3032 aa7.99□□□□□ -1.13
Pcdh20-201ENSMUST00000061628 Jbts17Q8CE72 3214 aa7.99□□□□□ -1.13
Pcdh20-201ENSMUST00000061628 Itpr2Q9Z329 2701 aa7.98□□□□□ -1.13
Pcdh20-201ENSMUST00000061628 TrioQ0KL02 3102 aa7.96□□□□□ -1.13
Pcdh20-201ENSMUST00000061628 TgO08710 2766 aa7.96□□□□□ -1.14
Pcdh20-201ENSMUST00000061628 Ndufaf8A2AMZ4 74 aa7.93□□□□□ -1.14
Pcdh20-201ENSMUST00000061628 Tnp1P10856 55 aa7.92□□□□□ -1.14
Pcdh20-201ENSMUST00000061628 Tex15F8VPN2 2785 aa7.92□□□□□ -1.14
Pcdh20-201ENSMUST00000061628 KalrnA2CG49 2964 aa7.91□□□□□ -1.14
Pcdh20-201ENSMUST00000061628 UtrnE9Q6R7 3430 aa7.89□□□□□ -1.15
Pcdh20-201ENSMUST00000061628 Col12a1Q60847 3120 aa7.86□□□□□ -1.15
Pcdh20-201ENSMUST00000061628 Gm2696A0A1W2P709 240 aa7.85□□□□□ -1.15
Pcdh20-201ENSMUST00000061628 Lama2Q60675 3118 aaKnown RBP7.85□□□□□ -1.15
Pcdh20-201ENSMUST00000061628 Gm5965D3Z724 196 aa7.84□□□□□ -1.15
Pcdh20-201ENSMUST00000061628 Srrm2Q8BTI8 2703 aaKnown RBP7.84□□□□□ -1.15
Pcdh20-201ENSMUST00000061628 A930033H14RikG5E8X6 103 aa7.8□□□□□ -1.16
Pcdh20-201ENSMUST00000061628 Rev3lQ61493 3122 aa7.78□□□□□ -1.16
Pcdh20-201ENSMUST00000061628 Gm7173A0A0G2JEB6 3132 aa7.77□□□□□ -1.17
Pcdh20-201ENSMUST00000061628 Gm20537G3UYK7 97 aa7.75□□□□□ -1.17
Pcdh20-201ENSMUST00000061628 Mki67E9PVX6 3177 aaKnown RBP7.73□□□□□ -1.17
Pcdh20-201ENSMUST00000061628 HttP42859 3119 aa7.72□□□□□ -1.17
Pcdh20-201ENSMUST00000061628 Gm9112A2AI92 75 aa7.7□□□□□ -1.18
Pcdh20-201ENSMUST00000061628 Utp20Q5XG71 2788 aaKnown RBP7.69□□□□□ -1.18
Pcdh20-201ENSMUST00000061628 B930094E09RikQ8C4T2 136 aa7.69□□□□□ -1.18
Pcdh20-201ENSMUST00000061628 ApcQ61315 2845 aa7.69□□□□□ -1.18
Pcdh20-201ENSMUST00000061628 Igfn1Q3KNY0 2849 aa7.66□□□□□ -1.18
Pcdh20-201ENSMUST00000061628 Gm17416Q30KP4 66 aa7.66□□□□□ -1.18
Pcdh20-201ENSMUST00000061628 2310057N15RikQ9D6T8 200 aa7.65□□□□□ -1.18
Pcdh20-201ENSMUST00000061628 2310079G19RikQ9D6L6 185 aa7.65□□□□□ -1.19
Pcdh20-201ENSMUST00000061628 Lama3Q61789 3330 aa7.63□□□□□ -1.19
Pcdh20-201ENSMUST00000061628 Tenm4Q3UHK6 2771 aa7.62□□□□□ -1.19
Pcdh20-201ENSMUST00000061628 Celsr1O35161 3034 aa7.62□□□□□ -1.19
Pcdh20-201ENSMUST00000061628 Ranbp2Q9ERU9 3053 aaKnown RBP7.61□□□□□ -1.19
Pcdh20-201ENSMUST00000061628 Usp34Q6ZQ93 3582 aa7.57□□□□□ -1.2
Pcdh20-201ENSMUST00000061628 Pdzd2E9Q1M1 2796 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms