RNA–Protein interactions for RNA: ENSMUST00000020931.5

Smc6-201, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc6, Length 5,603 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-201ENSMUST00000020931 Gm16253D3Z167 63 aa11.34□□□□□ -0.59
Smc6-201ENSMUST00000020931 BC029722A0A0N4SW31 51 aa11.27□□□□□ -0.6
Smc6-201ENSMUST00000020931 Krtap29-1A2A5X4 342 aa11.27□□□□□ -0.6
Smc6-201ENSMUST00000020931 Nsd1O88491 2588 aaKnown RBP11.26□□□□□ -0.61
Smc6-201ENSMUST00000020931 Myo18bE9PV66 2605 aa11.19□□□□□ -0.62
Smc6-201ENSMUST00000020931 Ankrd11E9Q4F7 2643 aa11.17□□□□□ -0.62
Smc6-201ENSMUST00000020931 CenpfE9Q3P4 2997 aaKnown RBP11.15□□□□□ -0.62
Smc6-201ENSMUST00000020931 Prrc2cQ3TLH4 2846 aaKnown RBP11.14□□□□□ -0.63
Smc6-201ENSMUST00000020931 FasnP19096 2504 aaKnown RBP11.14□□□□□ -0.63
Smc6-201ENSMUST00000020931 Fn1P11276 2477 aaKnown RBP11.11□□□□□ -0.63
Smc6-201ENSMUST00000020931 Krtap13O88375 197 aa11.11□□□□□ -0.63
Smc6-201ENSMUST00000020931 Gm9112A2AI92 75 aa11.1□□□□□ -0.63
Smc6-201ENSMUST00000020931 2310050C09RikG5E8Z3 280 aa11.08□□□□□ -0.64
Smc6-201ENSMUST00000020931 Gcn1E9PVA8 2671 aaKnown RBP11.07□□□□□ -0.64
Smc6-201ENSMUST00000020931 AtrQ9JKK8 2635 aa11.06□□□□□ -0.64
Smc6-201ENSMUST00000020931 Usp24B1AY13 2617 aaKnown RBP11.05□□□□□ -0.64
Smc6-201ENSMUST00000020931 Zfp292Q9Z2U2 2698 aa11.04□□□□□ -0.64
Smc6-201ENSMUST00000020931 FlnbQ80X90 2602 aaKnown RBP11.03□□□□□ -0.64
Smc6-201ENSMUST00000020931 Krtap14O08640 167 aa11.03□□□□□ -0.64
Smc6-201ENSMUST00000020931 Gm9507D3Z5T3 223 aa11□□□□□ -0.65
Smc6-201ENSMUST00000020931 Gm2310J3QNJ2 377 aa10.99□□□□□ -0.65
Smc6-201ENSMUST00000020931 Kmt2bO08550 2713 aa10.93□□□□□ -0.66
Smc6-201ENSMUST00000020931 Cox6b2Q80ZN9 88 aa10.9□□□□□ -0.66
Smc6-201ENSMUST00000020931 FlnaQ8BTM8 2647 aaKnown RBP10.9□□□□□ -0.66
Smc6-201ENSMUST00000020931 Jbts17Q8CE72 3214 aa10.87□□□□□ -0.67
Smc6-201ENSMUST00000020931 Rps29P62274 56 aa10.85□□□□□ -0.67
Smc6-201ENSMUST00000020931 Notch1Q01705 2531 aa10.85□□□□□ -0.67
Smc6-201ENSMUST00000020931 Gm9195A0A140LHT4 2805 aa10.83□□□□□ -0.68
Smc6-201ENSMUST00000020931 Krtap10-4Q08EG8 221 aa10.82□□□□□ -0.68
Smc6-201ENSMUST00000020931 Prm2P07978 107 aa10.78□□□□□ -0.68
Smc6-201ENSMUST00000020931 Tnp2P11378 117 aa10.74□□□□□ -0.69
Smc6-201ENSMUST00000020931 Krtap10-10A0A1W2P7T6 217 aa10.73□□□□□ -0.69
Smc6-201ENSMUST00000020931 Dnah12Q3V0Q1 3086 aa10.72□□□□□ -0.69
Smc6-201ENSMUST00000020931 PcntP48725 2898 aa10.72□□□□□ -0.69
Smc6-201ENSMUST00000020931 Ep400Q8CHI8 3072 aaKnown RBP10.68□□□□□ -0.7
Smc6-201ENSMUST00000020931 Bod1lE9Q6J5 3032 aa10.66□□□□□ -0.7
Smc6-201ENSMUST00000020931 2310061N02RikQ9D6S9 174 aa10.63□□□□□ -0.71
Smc6-201ENSMUST00000020931 Map1aQ9QYR6 2776 aa10.61□□□□□ -0.71
Smc6-201ENSMUST00000020931 Lama2Q60675 3118 aaKnown RBP10.6□□□□□ -0.71
Smc6-201ENSMUST00000020931 Hectd1Q69ZR2 2618 aaKnown RBP10.59□□□□□ -0.71
Smc6-201ENSMUST00000020931 Gm42715A0A087WP63 3095 aaKnown RBP10.59□□□□□ -0.71
Smc6-201ENSMUST00000020931 Gm21887J3QQ04 176 aa10.59□□□□□ -0.71
Smc6-201ENSMUST00000020931 D6Ertd527eA0A0N4SWI3 464 aa10.59□□□□□ -0.71
Smc6-201ENSMUST00000020931 Prune2Q52KR3 3084 aa10.58□□□□□ -0.72
Smc6-201ENSMUST00000020931 Cep350E9Q309 3095 aa10.58□□□□□ -0.72
Smc6-201ENSMUST00000020931 Stab1Q8R4Y4 2571 aa10.54□□□□□ -0.72
Smc6-201ENSMUST00000020931 Akap13E9Q394 2776 aa10.52□□□□□ -0.72
Smc6-201ENSMUST00000020931 TrioQ0KL02 3102 aa10.49□□□□□ -0.73
Smc6-201ENSMUST00000020931 Frem2Q6NVD0 3160 aa10.49□□□□□ -0.73
Smc6-201ENSMUST00000020931 UtrnE9Q6R7 3430 aa10.43□□□□□ -0.74
Smc6-201ENSMUST00000020931 Gm2696A0A1W2P709 240 aa10.43□□□□□ -0.74
Smc6-201ENSMUST00000020931 Ranbp2Q9ERU9 3053 aaKnown RBP10.43□□□□□ -0.74
Smc6-201ENSMUST00000020931 NipblQ6KCD5 2798 aaKnown RBP10.42□□□□□ -0.74
Smc6-201ENSMUST00000020931 Utp20Q5XG71 2788 aaKnown RBP10.4□□□□□ -0.74
Smc6-201ENSMUST00000020931 Gm20537G3UYK7 97 aa10.39□□□□□ -0.75
Smc6-201ENSMUST00000020931 Cfap54Q8C6S9 3106 aa10.39□□□□□ -0.75
Smc6-201ENSMUST00000020931 2310057N15RikQ9D6T8 200 aa10.38□□□□□ -0.75
Smc6-201ENSMUST00000020931 Tnp1P10856 55 aa10.34□□□□□ -0.75
Smc6-201ENSMUST00000020931 Ash1lQ99MY8 2958 aa10.34□□□□□ -0.75
Smc6-201ENSMUST00000020931 Gm5965D3Z724 196 aa10.34□□□□□ -0.75
Smc6-201ENSMUST00000020931 Igsf10Q3V1M1 2594 aa10.33□□□□□ -0.76
Smc6-201ENSMUST00000020931 Dmxl1Q6PNC0 3013 aa10.31□□□□□ -0.76
Smc6-201ENSMUST00000020931 Gm40193A0A1B0GT39 78 aa10.3□□□□□ -0.76
Smc6-201ENSMUST00000020931 Mast4Q811L6 2618 aa10.25□□□□□ -0.77
Smc6-201ENSMUST00000020931 Mki67E9PVX6 3177 aaKnown RBP10.23□□□□□ -0.77
Smc6-201ENSMUST00000020931 9530053A07RikE9PVG8 2581 aa10.23□□□□□ -0.77
Smc6-201ENSMUST00000020931 Itpr3P70227 2670 aa10.21□□□□□ -0.78
Smc6-201ENSMUST00000020931 Chd6A3KFM7 2711 aa10.2□□□□□ -0.78
Smc6-201ENSMUST00000020931 Usp34Q6ZQ93 3582 aa10.16□□□□□ -0.78
Smc6-201ENSMUST00000020931 Tep1P97499 2629 aa10.16□□□□□ -0.78
Smc6-201ENSMUST00000020931 A930033H14RikG5E8X6 103 aa10.15□□□□□ -0.78
Smc6-201ENSMUST00000020931 Lama3Q61789 3330 aa10.14□□□□□ -0.79
Smc6-201ENSMUST00000020931 Ubr5Q80TP3 2792 aa10.13□□□□□ -0.79
Smc6-201ENSMUST00000020931 DspE9Q557 2883 aaKnown RBP10.1□□□□□ -0.79
Smc6-201ENSMUST00000020931 Stab2Q8R4U0 2559 aa10.04□□□□□ -0.8
Smc6-201ENSMUST00000020931 Unc80Q8BLN6 3261 aa10.02□□□□□ -0.8
Smc6-201ENSMUST00000020931 TgO08710 2766 aa9.96□□□□□ -0.81
Smc6-201ENSMUST00000020931 Col12a1Q60847 3120 aa9.92□□□□□ -0.82
Smc6-201ENSMUST00000020931 Nbeal2Q6ZQA0 2742 aa9.92□□□□□ -0.82
Smc6-201ENSMUST00000020931 ApcQ61315 2845 aa9.91□□□□□ -0.82
Smc6-201ENSMUST00000020931 Vps13aQ5H8C4 3166 aa9.89□□□□□ -0.83
Smc6-201ENSMUST00000020931 B930094E09RikQ8C4T2 136 aa9.89□□□□□ -0.83
Smc6-201ENSMUST00000020931 KalrnA2CG49 2964 aa9.87□□□□□ -0.83
Smc6-201ENSMUST00000020931 Tex15F8VPN2 2785 aa9.86□□□□□ -0.83
Smc6-201ENSMUST00000020931 BptfA2A654 3036 aaKnown RBP9.84□□□□□ -0.83
Smc6-201ENSMUST00000020931 Chd7A2AJK6 2986 aaKnown RBP9.84□□□□□ -0.83
Smc6-201ENSMUST00000020931 Itpr1P11881 2749 aa9.83□□□□□ -0.84
Smc6-201ENSMUST00000020931 Fbn2Q61555 2907 aa9.83□□□□□ -0.84
Smc6-201ENSMUST00000020931 2310079G19RikQ9D6L6 185 aa9.81□□□□□ -0.84
Smc6-201ENSMUST00000020931 Tnrc18Q80WC3 2878 aa9.79□□□□□ -0.84
Smc6-201ENSMUST00000020931 Pkd1l1Q8R526 2615 aa9.79□□□□□ -0.84
Smc6-201ENSMUST00000020931 FcgbpE9Q0B5 2583 aa9.77□□□□□ -0.85
Smc6-201ENSMUST00000020931 Col6a5A6H584 2640 aa9.77□□□□□ -0.85
Smc6-201ENSMUST00000020931 Celsr3Q91ZI0 3301 aa9.76□□□□□ -0.85
Smc6-201ENSMUST00000020931 Srrm2Q8BTI8 2703 aaKnown RBP9.76□□□□□ -0.85
Smc6-201ENSMUST00000020931 Celsr1O35161 3034 aa9.76□□□□□ -0.85
Smc6-201ENSMUST00000020931 MgaA2AWL7 3003 aaKnown RBP9.75□□□□□ -0.85
Smc6-201ENSMUST00000020931 Gm7173A0A0G2JEB6 3132 aa9.67□□□□□ -0.86
Smc6-201ENSMUST00000020931 Lama1P19137 3084 aa9.66□□□□□ -0.86
Smc6-201ENSMUST00000020931 Myo15bI7HPW8 3033 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 137.6 ms