RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Insl3O09107 122 aa9.91□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Trav3-3Q5R1C3 114 aa9.91□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Cd33Q63994 403 aa9.91□□□□□ -0.82
Ercc1-201ENSMUST00000003645 BC106179Q8C9L1 186 aa9.91□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Ovol2Q8CIV7 274 aa9.91□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Ankrd39Q9D2X0 183 aa9.91□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Ly6g6cQ9Z1Q4 126 aa9.91□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Trav7-6A0A075B640 112 aa9.9□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Fndc10A2A9Q0 223 aa9.9□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Gm11444F6QMA6 170 aa9.9□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Gm1553Q66VB7 94 aa9.9□□□□□ -0.82
Ercc1-201ENSMUST00000003645 PlecQ9QXS1 4691 aaKnown RBP9.9□□□□□ -0.82
Ercc1-201ENSMUST00000003645 Tcrg-V4A0A0B4J1J8 138 aa9.89□□□□□ -0.83
Ercc1-201ENSMUST00000003645 2310050C09RikG5E8Z3 280 aa9.89□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Tmem223Q9CQE2 199 aaKnown RBP9.89□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Igkv6-13A0A0G2JGY3 119 aa9.88□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Gm10542F6XDR3 90 aa9.88□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Krtap10-10A0A1W2P7T6 217 aa9.88□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Prp2P05143 317 aa9.88□□□□□ -0.83
Ercc1-201ENSMUST00000003645 IqcjQ8BPW0 110 aa9.88□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Q9D727 114 aa9.88□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Esp24A8R0V6 68 aa9.87□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Gm20458E9PXJ7 78 aa9.87□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Sec11aQ9R0P6 179 aa9.87□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Krtap11-1E9Q2E9 183 aa9.86□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Gm28305F6U473 122 aa9.86□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Sprr1bQ62267 153 aa9.86□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Ighv2-9-1A0A075B697 116 aa9.85□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Prh1P05142 261 aa9.85□□□□□ -0.83
Ercc1-201ENSMUST00000003645 SeboxP70368 190 aa9.85□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Ifi27l2bQ8VC49 283 aa9.85□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Mpv17l2Q8VIK2 200 aa9.85□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Q9DAQ5 155 aa9.85□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Gm11213A0A1B0GR83 88 aa9.84□□□□□ -0.83
Ercc1-201ENSMUST00000003645 LeprotO89013 131 aa9.84□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Gm16485Q8C4B7 115 aa9.84□□□□□ -0.83
Ercc1-201ENSMUST00000003645 RetnQ99P87 114 aa9.84□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Hspb8Q9JK92 196 aa9.84□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Cend1Q9JKC6 149 aa9.84□□□□□ -0.83
Ercc1-201ENSMUST00000003645 Gpx1P11352 201 aa9.83□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Gm5617Q91VN2 117 aa9.83□□□□□ -0.84
Ercc1-201ENSMUST00000003645 1500009C09RikD3YYW9 81 aa9.82□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Defa15P50713 93 aa9.82□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Znf664Q4VA44 261 aa9.82□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Slc25a2Q99ML6 265 aa9.82□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Ighv13-2A0A0A6YWN3 119 aa9.81□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Ighv1-61P01749 117 aa9.81□□□□□ -0.84
Ercc1-201ENSMUST00000003645 AY074887Q8R5F9 132 aa9.81□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Tspan13Q9D8C2 204 aa9.81□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Trav9n-4A0A075B631 113 aa9.8□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Gatd1Q8BFQ8 220 aa9.8□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Mustn1Q99JI1 82 aa9.8□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Trav13-4-dv7A0A075B6C2 110 aa9.79□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Trav13d-4A0A0G2JFX3 110 aa9.79□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Brd3osA0A1B0GRB6 84 aa9.79□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Tmem97Q8VD00 176 aa9.79□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Gm45717A0A1B0GT68 152 aa9.78□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Ss18l2Q9D174 77 aa9.78□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Scgb1b10A0A087WPW0 93 aa9.77□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Fgf6P21658 208 aa9.77□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Pmp2P24526 132 aa9.77□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Pam16Q9CQV1 125 aa9.77□□□□□ -0.84
Ercc1-201ENSMUST00000003645 Ighv1-62-1A0A075B5U3 116 aa9.76□□□□□ -0.85
Ercc1-201ENSMUST00000003645 SpinklQ8CEK3 90 aa9.76□□□□□ -0.85
Ercc1-201ENSMUST00000003645 9430069I07RikQ9CX21 111 aa9.76□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Dnah7aE9Q0T8 4024 aa9.76□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Gm4064A0A087WR82 380 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Gm10352B2RWR6 380 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Ndufa1O35683 70 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Rbmy1a1O35698 380 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 P01837 106 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Foxi2Q3I5G5 311 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Rbmy1bQ60990 380 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Ndufc2Q9CQ54 120 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Fgf23Q9EPC2 251 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Trav11A0A0B4J1J9 114 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Fam240aJ3QNP9 97 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Ca1P13634 261 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Bsph2Q0Q236 131 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Gm10604Q3V0X7 143 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Gm5868Q8BJG1 145 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Mfap4Q9D1H9 257 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Zfand2aQ9JII7 171 aa9.75□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Trav8-1A0A075B641 109 aa9.74□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Tmem238A9JSM3 176 aa9.74□□□□□ -0.85
Ercc1-201ENSMUST00000003645 PpdpfQ9CR37 115 aa9.74□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Scgb1b11A0A087WQJ0 93 aa9.73□□□□□ -0.85
Ercc1-201ENSMUST00000003645 P01823 113 aa9.73□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Rbm7Q9CQT2 265 aaKnown RBP9.73□□□□□ -0.85
Ercc1-201ENSMUST00000003645 P0C913 63 aa9.72□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Ndufa12Q7TMF3 145 aaKnown RBP9.72□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Gm5148Q8BGG2 154 aa9.72□□□□□ -0.85
Ercc1-201ENSMUST00000003645 4930556J24RikQ9D4U7 146 aa9.72□□□□□ -0.85
Ercc1-201ENSMUST00000003645 Tex54G3UW99 86 aa9.71□□□□□ -0.86
Ercc1-201ENSMUST00000003645 P01896 185 aa9.71□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Trappc1Q5NCF2 145 aa9.71□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Cks1brtQ3UNC9 96 aa9.7□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Srsf9Q9D0B0 222 aaKnown RBP9.7□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Dnah9B1AR51 4484 aa9.69□□□□□ -0.86
Ercc1-201ENSMUST00000003645 Ighv2-9A0A075B5Q5 116 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms