RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W LRP1P38801 184 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W YJR061WP40355 935 aa2.23□□□□□ -2.05
RTT107YHR154W MTC3P53077 123 aa2.23□□□□□ -2.05
RTT107YHR154W DUO1P53168 247 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W TNA1P53322 534 aa2.23□□□□□ -2.05
RTT107YHR154W DOT1Q04089 582 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W PGC1Q08959 321 aa2.23□□□□□ -2.05
RTT107YHR154W FRE6Q12473 712 aa2.23□□□□□ -2.05
RTT107YHR154W CMP2P14747 604 aa2.22□□□□□ -2.05
RTT107YHR154W SAC7P17121 654 aa2.22□□□□□ -2.05
RTT107YHR154W RPN2P32565 945 aaKnown RBP2.22□□□□□ -2.05
RTT107YHR154W STE13P33894 931 aa2.22□□□□□ -2.05
RTT107YHR154W NOP4P37838 685 aaKnown RBP2.22□□□□□ -2.05
RTT107YHR154W ARL1P38116 183 aaKnown RBP2.22□□□□□ -2.05
RTT107YHR154W GIP2P40036 548 aa2.22□□□□□ -2.05
RTT107YHR154W SEC28P40509 296 aaKnown RBP2.22□□□□□ -2.05
RTT107YHR154W IMA5P40884 581 aa2.22□□□□□ -2.05
RTT107YHR154W IRC6P43615 237 aa2.22□□□□□ -2.05
RTT107YHR154W POL31P46957 487 aa2.22□□□□□ -2.05
RTT107YHR154W ZAP1P47043 880 aa2.22□□□□□ -2.05
RTT107YHR154W MTR3P48240 250 aaPredicted RBP2.22□□□□□ -2.05
RTT107YHR154W ORC4P54791 529 aa2.22□□□□□ -2.05
RTT107YHR154W ATG21Q02887 496 aa2.22□□□□□ -2.05
RTT107YHR154W PEX25Q02969 394 aa2.22□□□□□ -2.05
RTT107YHR154W SRT1Q03175 343 aa2.22□□□□□ -2.05
RTT107YHR154W TY1A-DR2Q03964 440 aaKnown RBP2.22□□□□□ -2.05
RTT107YHR154W GIS4Q04233 774 aa2.22□□□□□ -2.05
RTT107YHR154W BRE4Q07660 1125 aa2.22□□□□□ -2.05
RTT107YHR154W NBP2Q12163 236 aa2.22□□□□□ -2.05
RTT107YHR154W YLR149CQ99296 730 aa2.22□□□□□ -2.05
RTT107YHR154W SEM1O94742 89 aa2.22□□□□□ -2.05
RTT107YHR154W ADE3P07245 946 aaKnown RBP2.22□□□□□ -2.05
RTT107YHR154W FLO11P08640 1367 aa2.22□□□□□ -2.05
RTT107YHR154W HEM1P09950 548 aaPredicted RBP2.22□□□□□ -2.05
RTT107YHR154W MIH1P23748 554 aa2.22□□□□□ -2.05
RTT107YHR154W RPD3P32561 433 aa2.22□□□□□ -2.05
RTT107YHR154W SLA2P33338 968 aa2.22□□□□□ -2.05
RTT107YHR154W YKL151CP36059 337 aa2.22□□□□□ -2.05
RTT107YHR154W REG2P38232 338 aa2.22□□□□□ -2.05
RTT107YHR154W PRK1P40494 810 aa2.22□□□□□ -2.05
RTT107YHR154W CAB2P40506 365 aa2.22□□□□□ -2.05
RTT107YHR154W GCV1P48015 400 aa2.22□□□□□ -2.05
RTT107YHR154W EXG2P52911 562 aa2.22□□□□□ -2.05
RTT107YHR154W CIK1Q01649 594 aa2.22□□□□□ -2.05
RTT107YHR154W YLR456WQ06199 204 aa2.22□□□□□ -2.05
RTT107YHR154W SKG3Q06315 1026 aa2.22□□□□□ -2.05
RTT107YHR154W STP4Q07351 490 aa2.22□□□□□ -2.05
RTT107YHR154W YDL073WQ07454 984 aa2.22□□□□□ -2.05
RTT107YHR154W GPB1Q08886 897 aa2.22□□□□□ -2.05
RTT107YHR154W ELG1Q12050 791 aa2.22□□□□□ -2.05
RTT107YHR154W RTN2Q12443 393 aa2.22□□□□□ -2.05
RTT107YHR154W SUI3P09064 285 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W REC107P21651 314 aa2.21□□□□□ -2.06
RTT107YHR154W STB6P36085 766 aa2.21□□□□□ -2.06
RTT107YHR154W NPR3P38742 1146 aa2.21□□□□□ -2.06
RTT107YHR154W STT3P39007 718 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W ZIM17P42844 174 aa2.21□□□□□ -2.06
RTT107YHR154W MCM6P53091 1017 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W YLR407WQ06070 228 aa2.21□□□□□ -2.06
RTT107YHR154W ALE1Q08548 619 aa2.21□□□□□ -2.06
RTT107YHR154W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
RTT107YHR154W CFT2Q12102 859 aaPredicted RBP2.21□□□□□ -2.06
RTT107YHR154W PCD1Q12524 340 aa2.21□□□□□ -2.06
RTT107YHR154W ATG11Q12527 1178 aa2.21□□□□□ -2.06
RTT107YHR154W YBR182C-AQ8TGU6 64 aa2.21□□□□□ -2.06
RTT107YHR154W MTF2P10849 440 aa2.21□□□□□ -2.06
RTT107YHR154W GRR1P24814 1151 aa2.21□□□□□ -2.06
RTT107YHR154W COQ2P32378 372 aa2.21□□□□□ -2.06
RTT107YHR154W TYE7P33122 291 aaPredicted RBP2.21□□□□□ -2.06
RTT107YHR154W OCT1P35999 772 aa2.21□□□□□ -2.06
RTT107YHR154W APN2P38207 520 aa2.21□□□□□ -2.06
RTT107YHR154W SRP68P38687 599 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W NPP2P39997 493 aa2.21□□□□□ -2.06
RTT107YHR154W NOP15P53927 220 aaPredicted RBP2.21□□□□□ -2.06
RTT107YHR154W ADY3Q07732 790 aa2.21□□□□□ -2.06
RTT107YHR154W VHS3Q08438 674 aa2.21□□□□□ -2.06
RTT107YHR154W SUT2Q12286 268 aa2.21□□□□□ -2.06
RTT107YHR154W SWI6P09959 803 aa2.21□□□□□ -2.06
RTT107YHR154W CDC24P11433 854 aaPredicted RBP2.21□□□□□ -2.06
RTT107YHR154W ERS1P17261 260 aa2.21□□□□□ -2.06
RTT107YHR154W SEC15P22224 910 aa2.21□□□□□ -2.06
RTT107YHR154W RPS7AP26786 190 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W EFT1P32324 842 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W TFB1P32776 642 aa2.21□□□□□ -2.06
RTT107YHR154W MAE1P36013 669 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W YBR138CP38277 524 aa2.21□□□□□ -2.06
RTT107YHR154W GIC1P38785 314 aa2.21□□□□□ -2.06
RTT107YHR154W VAB2P40003 282 aa2.21□□□□□ -2.06
RTT107YHR154W GCV2P49095 1034 aa2.21□□□□□ -2.06
RTT107YHR154W PSP1P50896 841 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W SGF73P53165 657 aa2.21□□□□□ -2.06
RTT107YHR154W JJJ1P53863 590 aa2.21□□□□□ -2.06
RTT107YHR154W PKH1Q03407 766 aa2.21□□□□□ -2.06
RTT107YHR154W IWR1Q07532 353 aaPredicted RBP2.21□□□□□ -2.06
RTT107YHR154W ENT4Q07872 247 aa2.21□□□□□ -2.06
RTT107YHR154W CUE5Q08412 411 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W YOR223WQ12015 292 aa2.21□□□□□ -2.06
RTT107YHR154W PDH1Q12428 516 aaKnown RBP2.21□□□□□ -2.06
RTT107YHR154W APM4Q99186 491 aa2.21□□□□□ -2.06
RTT107YHR154W HOM2P13663 365 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms