RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TCA17, Length 459 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCA17	YEL048C	VPS64	Q03944	604 aa		5.07	□□□□□ -1.6
TCA17	YEL048C	PLM2	Q04383	521 aa		5.07	□□□□□ -1.6
TCA17	YEL048C	CRD1	Q07560	283 aa		5.07	□□□□□ -1.6
TCA17	YEL048C	PNO1	Q99216	274 aa	Known RBP	5.07	□□□□□ -1.6
TCA17	YEL048C	AMD2	P22580	549 aa		5.06	□□□□□ -1.6
TCA17	YEL048C	RPS7A	P26786	190 aa	Known RBP	5.06	□□□□□ -1.6
TCA17	YEL048C	SWD1	P39706	426 aa		5.06	□□□□□ -1.6
TCA17	YEL048C	CRF1	Q04930	467 aa		5.06	□□□□□ -1.6
TCA17	YEL048C	YOR389W	Q08912	624 aa		5.06	□□□□□ -1.6
TCA17	YEL048C	ADH4	P10127	382 aa		5.05	□□□□□ -1.6
TCA17	YEL048C	JHD1	P40034	492 aa		5.05	□□□□□ -1.6
TCA17	YEL048C	IRC7	P43623	340 aa		5.05	□□□□□ -1.6
TCA17	YEL048C	POL31	P46957	487 aa		5.05	□□□□□ -1.6
TCA17	YEL048C	MPS1	P54199	764 aa		5.05	□□□□□ -1.6
TCA17	YEL048C	YML053C	Q04978	212 aa		5.05	□□□□□ -1.6
TCA17	YEL048C	YDL242W	Q07746	117 aa		5.05	□□□□□ -1.6
TCA17	YEL048C	RRP43	P25359	394 aa	Predicted RBP	5.04	□□□□□ -1.6
TCA17	YEL048C	ARO9	P38840	513 aa	Predicted RBP	5.04	□□□□□ -1.6
TCA17	YEL048C	SAP1	P39955	897 aa	Known RBP	5.04	□□□□□ -1.6
TCA17	YEL048C	MNT3	P40549	630 aa		5.04	□□□□□ -1.6
TCA17	YEL048C	AAD4	Q07747	329 aa		5.04	□□□□□ -1.6
TCA17	YEL048C	LCB4	Q12246	624 aa		5.04	□□□□□ -1.6
TCA17	YEL048C	CRC1	Q12289	327 aa		5.04	□□□□□ -1.6
TCA17	YEL048C	KGD2	P19262	463 aa	Predicted RBP	5.03	□□□□□ -1.6
TCA17	YEL048C	SWC3	P31376	625 aa		5.03	□□□□□ -1.6
TCA17	YEL048C	NIC96	P34077	839 aa		5.03	□□□□□ -1.6
TCA17	YEL048C	ARB1	P40024	610 aa	Known RBP	5.03	□□□□□ -1.6
TCA17	YEL048C	IMA5	P40884	581 aa		5.03	□□□□□ -1.6
TCA17	YEL048C	SNU56	Q03782	492 aa	Known RBP	5.03	□□□□□ -1.6
TCA17	YEL048C	SND1	Q04007	877 aa		5.03	□□□□□ -1.6
TCA17	YEL048C	ARP7	Q12406	477 aa		5.03	□□□□□ -1.6
TCA17	YEL048C	TMA7	Q3E764	64 aa	Known RBP	5.03	□□□□□ -1.6
TCA17	YEL048C	CET1	O13297	549 aa	Predicted RBP	5.02	□□□□□ -1.61
TCA17	YEL048C	ILS1	P09436	1072 aa	Known RBP	5.02	□□□□□ -1.61
TCA17	YEL048C	YMR085W	P0CF18	432 aa		5.02	□□□□□ -1.61
TCA17	YEL048C	YAP1	P19880	650 aa	Known RBP	5.02	□□□□□ -1.61
TCA17	YEL048C	SIP1	P32578	815 aa		5.02	□□□□□ -1.61
TCA17	YEL048C	ECM32	P32644	1121 aa	Known RBP	5.02	□□□□□ -1.61
TCA17	YEL048C	KES1	P35844	434 aa	Known RBP	5.02	□□□□□ -1.61
TCA17	YEL048C	FTH1	P38310	465 aa		5.02	□□□□□ -1.61
TCA17	YEL048C	RTC1	Q08281	1341 aa		5.01	□□□□□ -1.61
TCA17	YEL048C	RPF2	P36160	344 aa	Known RBP	5.01	□□□□□ -1.61
TCA17	YEL048C	VPS8	P39702	1274 aa		5.01	□□□□□ -1.61
TCA17	YEL048C	MPD2	Q99316	277 aa		5.01	□□□□□ -1.61
TCA17	YEL048C	IMD2	P38697	523 aa	Known RBP	5	□□□□□ -1.61
TCA17	YEL048C	SPC97	P38863	823 aa		5	□□□□□ -1.61
TCA17	YEL048C	NOP2	P40991	618 aa	Known RBP	5	□□□□□ -1.61
TCA17	YEL048C	IMD3	P50095	523 aa	Known RBP	5	□□□□□ -1.61
TCA17	YEL048C	AIM6	Q07716	390 aa		5	□□□□□ -1.61
TCA17	YEL048C	GEP3	Q08622	556 aa		5	□□□□□ -1.61
TCA17	YEL048C	ILV2	P07342	687 aa	Known RBP	4.99	□□□□□ -1.61
TCA17	YEL048C	PDE1	P22434	369 aa		4.99	□□□□□ -1.61
TCA17	YEL048C	COQ3	P27680	312 aa		4.99	□□□□□ -1.61
TCA17	YEL048C	YIL024C	P40543	189 aa		4.99	□□□□□ -1.61
TCA17	YEL048C	TAN1	P53072	289 aa	Predicted RBP	4.99	□□□□□ -1.61
TCA17	YEL048C	ESF2	P53743	316 aa	Known RBP	4.99	□□□□□ -1.61
TCA17	YEL048C	TGL2	P54857	326 aa		4.99	□□□□□ -1.61
TCA17	YEL048C	CEG1	Q01159	459 aa	Predicted RBP	4.99	□□□□□ -1.61
TCA17	YEL048C	YPL191C	Q08930	360 aa		4.99	□□□□□ -1.61
TCA17	YEL048C	Q0010	Q9ZZX9	128 aa		4.99	□□□□□ -1.61
TCA17	YEL048C	MAK32	P23060	363 aa		4.98	□□□□□ -1.61
TCA17	YEL048C	TOM20	P35180	183 aa		4.98	□□□□□ -1.61
TCA17	YEL048C	VBA2	P38358	474 aa	Known RBP	4.98	□□□□□ -1.61
TCA17	YEL048C	PCI8	P40512	444 aa		4.98	□□□□□ -1.61
TCA17	YEL048C	CFD1	P40558	293 aa		4.98	□□□□□ -1.61
TCA17	YEL048C	CIN1	P40987	1014 aa		4.98	□□□□□ -1.61
TCA17	YEL048C	PEX8	P53248	589 aa		4.98	□□□□□ -1.61
TCA17	YEL048C	COP1	P53622	1201 aa	Known RBP	4.98	□□□□□ -1.61
TCA17	YEL048C	YAT1	P80235	687 aa		4.98	□□□□□ -1.61
TCA17	YEL048C	YPR089W	O13585	888 aa		4.97	□□□□□ -1.61
TCA17	YEL048C	SST2	P11972	698 aa	Known RBP	4.97	□□□□□ -1.61
TCA17	YEL048C	YKL133C	P36066	463 aa		4.97	□□□□□ -1.61
TCA17	YEL048C	GRX7	P38068	203 aa		4.97	□□□□□ -1.61
TCA17	YEL048C	MAD3	P47074	515 aa		4.97	□□□□□ -1.61
TCA17	YEL048C	SCW4	P53334	386 aa	Known RBP	4.97	□□□□□ -1.61
TCA17	YEL048C	YPL108W	Q02872	168 aa	Predicted RBP	4.97	□□□□□ -1.61
TCA17	YEL048C	RAD34	Q06665	692 aa		4.97	□□□□□ -1.61
TCA17	YEL048C	LYS21	Q12122	440 aa	Known RBP	4.97	□□□□□ -1.61
TCA17	YEL048C	YOL114C	Q12322	202 aa		4.97	□□□□□ -1.61
TCA17	YEL048C	YBR255C-A	Q3E776	120 aa		4.97	□□□□□ -1.61
TCA17	YEL048C	SES1	P07284	462 aa	Known RBP	4.96	□□□□□ -1.62
TCA17	YEL048C	CAB2	P40506	365 aa		4.96	□□□□□ -1.62
TCA17	YEL048C	TEP1	P53916	434 aa		4.96	□□□□□ -1.62
TCA17	YEL048C	MRPL1	Q04599	285 aa		4.96	□□□□□ -1.62
TCA17	YEL048C	ASK1	P35734	292 aa		4.95	□□□□□ -1.62
TCA17	YEL048C	STT3	P39007	718 aa	Known RBP	4.95	□□□□□ -1.62
TCA17	YEL048C	YMR124W	P39523	943 aa	Known RBP	4.95	□□□□□ -1.62
TCA17	YEL048C	FUN12	P39730	1002 aa	Known RBP	4.95	□□□□□ -1.62
TCA17	YEL048C	YPL068C	Q02749	293 aa		4.95	□□□□□ -1.62
TCA17	YEL048C	ARA2	Q04212	335 aa		4.95	□□□□□ -1.62
TCA17	YEL048C	HER1	Q12276	1246 aa		4.95	□□□□□ -1.62
TCA17	YEL048C	PTC6	P25646	442 aa		4.94	□□□□□ -1.62
TCA17	YEL048C	ERC1	P38767	581 aa		4.94	□□□□□ -1.62
TCA17	YEL048C	FLO5	P38894	1075 aa		4.94	□□□□□ -1.62
TCA17	YEL048C	ATG21	Q02887	496 aa		4.94	□□□□□ -1.62
TCA17	YEL048C	ICL2	Q12031	575 aa		4.94	□□□□□ -1.62
TCA17	YEL048C	POL3	P15436	1097 aa		4.93	□□□□□ -1.62
TCA17	YEL048C	SIR1	P21691	654 aa		4.93	□□□□□ -1.62
TCA17	YEL048C	MSS51	P32335	436 aa		4.93	□□□□□ -1.62
TCA17	YEL048C	UBX6	P47049	396 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms