RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 RESP18Q5W5W9 173 aa15.09■□□□□ 0.01
BRF1-222ENST00000635152 CRACR2BQ8N4Y2 399 aaPredicted RBP15.09■□□□□ 0.01
BRF1-222ENST00000635152 LINC00116Q8NCU8 138 aa15.09■□□□□ 0.01
BRF1-222ENST00000635152 OXER1Q8TDS5 423 aa15.09■□□□□ 0.01
BRF1-222ENST00000635152 WASF1Q92558 559 aa15.09■□□□□ 0.01
BRF1-222ENST00000635152 RNF41Q9H4P4 317 aaPredicted RBP15.09■□□□□ 0.01
BRF1-222ENST00000635152 GNL3LQ9NVN8 582 aaKnown RBP15.09■□□□□ 0.01
BRF1-222ENST00000635152 KLRK1P26718 216 aa15.08■□□□□ 0.01
BRF1-222ENST00000635152 NCAPHQ15003 741 aa15.08■□□□□ 0.01
BRF1-222ENST00000635152 PTPN21Q16825 1174 aa15.08■□□□□ 0.01
BRF1-222ENST00000635152 FAM98CQ17RN3 349 aaKnown RBP15.08■□□□□ 0.01
BRF1-222ENST00000635152 HSP90AA4PQ58FG1 418 aa15.08■□□□□ 0.01
BRF1-222ENST00000635152 CAVIN4Q5BKX8 364 aa15.08■□□□□ 0.01
BRF1-222ENST00000635152 MAP7D2Q96T17 732 aa15.08■□□□□ 0.01
BRF1-222ENST00000635152 JAG2Q9Y219 1238 aa15.08■□□□□ 0.01
BRF1-222ENST00000635152 DDX60Q8IY21 1712 aaKnown RBP15.08■□□□□ 0
BRF1-222ENST00000635152 CCZ1BP86790 482 aa15.08■□□□□ 0
BRF1-222ENST00000635152 CCZ1P86791 482 aaPredicted RBP15.08■□□□□ 0
BRF1-222ENST00000635152 PTF1AQ7RTS3 328 aa15.08■□□□□ 0
BRF1-222ENST00000635152 MINPP1Q9UNW1 487 aa15.08■□□□□ 0
BRF1-222ENST00000635152 STK36Q9NRP7 1315 aa15.08■□□□□ 0
BRF1-222ENST00000635152 TPM4P67936 248 aa15.07■□□□□ 0
BRF1-222ENST00000635152 EVX2Q03828 476 aa15.07■□□□□ 0
BRF1-222ENST00000635152 METTL16Q86W50 562 aaKnown RBP15.07■□□□□ 0
BRF1-222ENST00000635152 FOXP4Q8IVH2 680 aaPredicted RBP15.07■□□□□ 0
BRF1-222ENST00000635152 PDILTQ8N807 584 aa15.07■□□□□ 0
BRF1-222ENST00000635152 KRI1Q8N9T8 703 aaKnown RBP15.07■□□□□ 0
BRF1-222ENST00000635152 ESR2Q92731 530 aa15.07■□□□□ 0
BRF1-222ENST00000635152 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.07■□□□□ 0
BRF1-222ENST00000635152 PCDHB6Q9Y5E3 794 aa15.07■□□□□ 0
BRF1-222ENST00000635152 CUTAO60888 179 aa15.07■□□□□ 0
BRF1-222ENST00000635152 DEXIO95424 95 aa15.07■□□□□ 0
BRF1-222ENST00000635152 PIP4K2BP78356 416 aa15.07■□□□□ 0
BRF1-222ENST00000635152 SLC4A8Q2Y0W8 1093 aa15.07■□□□□ 0
BRF1-222ENST00000635152 FAM84BQ96KN1 310 aaPredicted RBP15.07■□□□□ 0
BRF1-222ENST00000635152 TIGD1Q96MW7 591 aa15.07■□□□□ 0
BRF1-222ENST00000635152 CABP5Q9NP86 173 aa15.07■□□□□ 0
BRF1-222ENST00000635152 PCDHA5Q9Y5H7 936 aa15.07■□□□□ 0
BRF1-222ENST00000635152 SPATA31A5Q5VU36 1347 aa15.07■□□□□ 0
BRF1-222ENST00000635152 SPATA31A7Q8IWB4 1347 aa15.07■□□□□ 0
BRF1-222ENST00000635152 CCDC196A0A1B0GTZ2 297 aa15.07■□□□□ 0
BRF1-222ENST00000635152 NEMFO60524 1076 aa15.07■□□□□ 0
BRF1-222ENST00000635152 TMTC2Q8N394 836 aa15.07■□□□□ 0
BRF1-222ENST00000635152 BPIFA3Q9BQP9 254 aa15.07■□□□□ 0
BRF1-222ENST00000635152 RIOK1Q9BRS2 568 aaKnown RBP15.07■□□□□ 0
BRF1-222ENST00000635152 TFCP2L1Q9NZI6 479 aa15.07■□□□□ 0
BRF1-222ENST00000635152 VPS54Q9P1Q0 977 aa15.07■□□□□ 0
BRF1-222ENST00000635152 SMTNL1A8MU46 457 aa15.06■□□□□ 0
BRF1-222ENST00000635152 TBC1D9BQ66K14 1250 aa15.06■□□□□ 0
BRF1-222ENST00000635152 KRBA2Q6ZNG9 492 aa15.06■□□□□ 0
BRF1-222ENST00000635152 BSDC1Q9NW68 430 aaPredicted RBP15.06■□□□□ 0
BRF1-222ENST00000635152 TUBE1Q9UJT0 475 aa15.06■□□□□ 0
BRF1-222ENST00000635152 ZNF804BA4D1E1 1349 aa15.06■□□□□ 0
BRF1-222ENST00000635152 RTL9Q8NET4 1388 aa15.06■□□□□ 0
BRF1-222ENST00000635152 FAM205CA6NFA0 338 aa15.06■□□□□ 0
BRF1-222ENST00000635152 FANCCQ00597 558 aa15.06■□□□□ 0
BRF1-222ENST00000635152 AKAP17AQ02040 695 aaKnown RBP15.06■□□□□ 0
BRF1-222ENST00000635152 CEP135Q66GS9 1140 aa15.06■□□□□ 0
BRF1-222ENST00000635152 ENAHQ8N8S7 591 aaPredicted RBP15.06■□□□□ 0
BRF1-222ENST00000635152 ZNF384Q8TF68 577 aa15.06■□□□□ 0
BRF1-222ENST00000635152 SMARCC1Q92922 1105 aaPredicted RBP15.06■□□□□ 0
BRF1-222ENST00000635152 COL1A1P02452 1464 aaPredicted RBP15.05■□□□□ 0
BRF1-222ENST00000635152 POLR2DO15514 142 aaKnown RBP15.05■□□□□ 0
BRF1-222ENST00000635152 UBE4AQ14139 1066 aa15.05■□□□□ 0
BRF1-222ENST00000635152 SRP68Q9UHB9 627 aaKnown RBP15.05■□□□□ 0
BRF1-222ENST00000635152 SERPINC1P01008 464 aa15.05■□□□□ -0
BRF1-222ENST00000635152 PTPN14Q15678 1187 aa15.05■□□□□ -0
BRF1-222ENST00000635152 IFIT1BQ5T764 474 aaKnown RBP15.05■□□□□ -0
BRF1-222ENST00000635152 ARMCX5Q6P1M9 558 aa15.05■□□□□ -0
BRF1-222ENST00000635152 CLEC4GQ6UXB4 293 aa15.05■□□□□ -0
BRF1-222ENST00000635152 MTERF4Q7Z6M4 381 aaKnown RBP15.05■□□□□ -0
BRF1-222ENST00000635152 GRAMD1CQ8IYS0 662 aa15.05■□□□□ -0
BRF1-222ENST00000635152 HSD3B7Q9H2F3 369 aa15.05■□□□□ -0
BRF1-222ENST00000635152 TAF1P21675 1872 aa15.05■□□□□ -0
BRF1-222ENST00000635152 USP17L12C9JPN9 530 aa15.04■□□□□ -0
BRF1-222ENST00000635152 USP17L21D6R901 530 aa15.04■□□□□ -0
BRF1-222ENST00000635152 GSDMDP57764 484 aa15.04■□□□□ -0
BRF1-222ENST00000635152 NAA30Q147X3 362 aaPredicted RBP15.04■□□□□ -0
BRF1-222ENST00000635152 SEC23AQ15436 765 aa15.04■□□□□ -0
BRF1-222ENST00000635152 RILPL1Q5EBL4 403 aa15.04■□□□□ -0
BRF1-222ENST00000635152 USP49Q70CQ1 688 aa15.04■□□□□ -0
BRF1-222ENST00000635152 RGS22Q8NE09 1264 aa15.04■□□□□ -0
BRF1-222ENST00000635152 DPF2Q92785 391 aa15.04■□□□□ -0
BRF1-222ENST00000635152 ZSCAN10Q96SZ4 725 aaPredicted RBP15.04■□□□□ -0
BRF1-222ENST00000635152 FOXP1Q9H334 677 aaPredicted RBP15.04■□□□□ -0
BRF1-222ENST00000635152 AATFQ9NY61 560 aaKnown RBP eCLIP15.04■□□□□ -0
BRF1-222ENST00000635152 V9GY48 417 aaPredicted RBP15.04■□□□□ -0
BRF1-222ENST00000635152 PLCH1Q4KWH8 1693 aa15.04■□□□□ -0
BRF1-222ENST00000635152 PLEKHA8P1O95397 391 aa15.04■□□□□ -0
BRF1-222ENST00000635152 SFPQP23246 707 aaKnown RBP eCLIP15.04■□□□□ -0
BRF1-222ENST00000635152 SF3B3Q15393 1217 aaKnown RBP15.04■□□□□ -0
BRF1-222ENST00000635152 ZNF827Q17R98 1081 aa15.04■□□□□ -0
BRF1-222ENST00000635152 OLFM4Q6UX06 510 aa15.04■□□□□ -0
BRF1-222ENST00000635152 CCDC112Q8NEF3 446 aa15.04■□□□□ -0
BRF1-222ENST00000635152 SHISA4Q96DD7 197 aa15.04■□□□□ -0
BRF1-222ENST00000635152 ARAP2Q8WZ64 1704 aa15.04■□□□□ -0
BRF1-222ENST00000635152 BCL9LQ86UU0 1499 aa15.03■□□□□ -0
BRF1-222ENST00000635152 NMT2O60551 498 aa15.03■□□□□ -0
BRF1-222ENST00000635152 UBASH3AP57075 661 aa15.03■□□□□ -0
BRF1-222ENST00000635152 MYL5Q02045 173 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms