RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 TSPY2A6NKD2 308 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 NPR1P16066 1061 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 SSRP1Q08945 709 aaKnown RBP11.56□□□□□ -0.56
VTA1-205ENST00000620996 SF3A1Q15459 793 aaKnown RBP11.56□□□□□ -0.56
VTA1-205ENST00000620996 GIMAP6Q6P9H5 292 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 PIBF1Q8WXW3 757 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 ZNF396Q96N95 335 aaPredicted RBP11.56□□□□□ -0.56
VTA1-205ENST00000620996 TSPY26PQ9H489 355 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 SALL1Q9NSC2 1324 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 UBE2Q2LH0YL09 131 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 LDHCP07864 332 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 HOXA10P31260 410 aaPredicted RBP11.55□□□□□ -0.56
VTA1-205ENST00000620996 BTDP43251 543 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 ME1P48163 572 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 ZNF654Q8IZM8 581 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 NMT2O60551 498 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 SRGNP10124 158 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 LIFRP42702 1097 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 PDE4BQ07343 736 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
VTA1-205ENST00000620996 TRIM22Q8IYM9 498 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 DYNLL2Q96FJ2 89 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 MKNK2Q9HBH9 465 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 ATP8A2Q9NTI2 1148 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 PDS5AQ29RF7 1337 aaKnown RBP11.55□□□□□ -0.56
VTA1-205ENST00000620996 LIG1P18858 919 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 AKAP17AQ02040 695 aaKnown RBP11.55□□□□□ -0.56
VTA1-205ENST00000620996 USP28Q96RU2 1077 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 ZSCAN10Q96SZ4 725 aaPredicted RBP11.55□□□□□ -0.56
VTA1-205ENST00000620996 ATP6V0A2Q9Y487 856 aa11.55□□□□□ -0.56
VTA1-205ENST00000620996 hCG_1642624A0A1W2PR95 340 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 ALDH1B1P30837 517 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 CATIPQ7Z7H3 387 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 SGMS1Q86VZ5 419 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 SP8Q8IXZ3 490 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 TEX11Q8IYF3 940 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 MXD3Q9BW11 206 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 ARPP21Q9UBL0 812 aaPredicted RBP11.54□□□□□ -0.56
VTA1-205ENST00000620996 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 CHRNA5P30532 468 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 PICALMQ13492 652 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 STK38Q15208 465 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 FBXO18Q8NFZ0 1043 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 MYH13Q9UKX3 1938 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 CACNA1SQ13698 1873 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 H0YIN7 160 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 PLCB2Q00722 1185 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 ENAHQ8N8S7 591 aaPredicted RBP11.54□□□□□ -0.56
VTA1-205ENST00000620996 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
VTA1-205ENST00000620996 KRT40Q6A162 431 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 CKAP2LQ8IYA6 745 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 TMTC2Q8N394 836 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 DBNDD1Q9H9R9 158 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 DACT1Q9NYF0 836 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 FAM13BQ9NYF5 915 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 MROH7-TTC4A0A0A0MT08 1334 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 BAZ2AQ9UIF9 1905 aaKnown RBP11.53□□□□□ -0.56
VTA1-205ENST00000620996 SCNN1DP51172 638 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 TRIM44Q96DX7 344 aaPredicted RBP11.53□□□□□ -0.56
VTA1-205ENST00000620996 NUP62CLQ9H1M0 184 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 RGS17Q9UGC6 210 aaPredicted RBP11.53□□□□□ -0.56
VTA1-205ENST00000620996 ANAPC4Q9UJX5 808 aa11.53□□□□□ -0.56
VTA1-205ENST00000620996 ATP2B1P20020 1258 aa11.52□□□□□ -0.56
VTA1-205ENST00000620996 SLC15A2Q16348 729 aa11.52□□□□□ -0.56
VTA1-205ENST00000620996 TMC4Q7Z404 712 aa11.52□□□□□ -0.56
VTA1-205ENST00000620996 FANCBQ8NB91 859 aa11.52□□□□□ -0.56
VTA1-205ENST00000620996 SLC44A5Q8NCS7 719 aa11.52□□□□□ -0.56
VTA1-205ENST00000620996 PDCL3Q9H2J4 239 aa11.52□□□□□ -0.56
VTA1-205ENST00000620996 KCNJ14Q9UNX9 436 aa11.52□□□□□ -0.56
VTA1-205ENST00000620996 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.56
VTA1-205ENST00000620996 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 KIF28PB7ZC32 967 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 GUCY1A2P33402 732 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 TFAP4Q01664 338 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 DEFB132Q7Z7B7 95 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 PGBD1Q96JS3 809 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 TNMDQ9H2S6 317 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 ELP1O95163 1332 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 IL1R1P14778 569 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 SAFBQ15424 915 aaKnown RBP eCLIP11.52□□□□□ -0.57
VTA1-205ENST00000620996 TBC1D22AQ8WUA7 517 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
VTA1-205ENST00000620996 CLIC4Q9Y696 253 aa11.52□□□□□ -0.57
VTA1-205ENST00000620996 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
VTA1-205ENST00000620996 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
VTA1-205ENST00000620996 CCDC73Q6ZRK6 1079 aa11.51□□□□□ -0.57
VTA1-205ENST00000620996 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
VTA1-205ENST00000620996 CCAR1Q8IX12 1150 aaKnown RBP11.51□□□□□ -0.57
VTA1-205ENST00000620996 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
VTA1-205ENST00000620996 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
VTA1-205ENST00000620996 TTF2Q9UNY4 1162 aaKnown RBP11.51□□□□□ -0.57
VTA1-205ENST00000620996 NR1I2O75469 434 aa11.51□□□□□ -0.57
VTA1-205ENST00000620996 RBM5P52756 815 aaKnown RBP eCLIP11.51□□□□□ -0.57
VTA1-205ENST00000620996 KIF23Q02241 960 aaPredicted RBP11.51□□□□□ -0.57
VTA1-205ENST00000620996 WASF1Q92558 559 aa11.51□□□□□ -0.57
VTA1-205ENST00000620996 RTFDC1Q9BY42 306 aaPredicted RBP11.51□□□□□ -0.57
VTA1-205ENST00000620996 STX8Q9UNK0 236 aa11.51□□□□□ -0.57
VTA1-205ENST00000620996 KLRG2A4D1S0 409 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms