RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 USP17L1Q7RTZ2 530 aa8.11□□□□□ -1.11
BRCC3-209ENST00000620502 PNMA8AQ86V59 439 aaPredicted RBP8.11□□□□□ -1.11
BRCC3-209ENST00000620502 EHBP1Q8NDI1 1231 aa8.11□□□□□ -1.11
BRCC3-209ENST00000620502 FOXJ1Q92949 421 aa8.11□□□□□ -1.11
BRCC3-209ENST00000620502 FAM84BQ96KN1 310 aaPredicted RBP8.11□□□□□ -1.11
BRCC3-209ENST00000620502 MXD3Q9BW11 206 aa8.11□□□□□ -1.11
BRCC3-209ENST00000620502 SIL1Q9H173 461 aa8.11□□□□□ -1.11
BRCC3-209ENST00000620502 C1orf115Q9H7X2 142 aa8.11□□□□□ -1.11
BRCC3-209ENST00000620502 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
BRCC3-209ENST00000620502 CNOT7Q9UIV1 285 aaKnown RBP8.11□□□□□ -1.11
BRCC3-209ENST00000620502 EGFRP00533 1210 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 HSPA6P17066 643 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 VARSP26640 1264 aaKnown RBP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 IL15P40933 162 aaPredicted RBP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 GYG1P46976 350 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 GTF2IP78347 998 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 PDE3AQ14432 1141 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 MVPQ14764 893 aaKnown RBP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 EAPPQ56P03 285 aaPredicted RBP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 C4orf48Q5BLP8 95 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 STRIP1Q5VSL9 837 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 FBXO33Q7Z6M2 555 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 LDHDQ86WU2 507 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 AGBL3Q8NEM8 1001 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 TDRD7Q8NHU6 1098 aaKnown RBP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 SSH3Q8TE77 659 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 GPKOWQ92917 476 aaPredicted RBP eCLIP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 ADARB2Q9NS39 739 aaKnown RBP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 PGAP2Q9UHJ9 254 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 COG6Q9Y2V7 657 aa8.1□□□□□ -1.11
BRCC3-209ENST00000620502 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
BRCC3-209ENST00000620502 H7C1D1 291 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 SASH1O94885 1247 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 HIBADHP31937 336 aaKnown RBP8.09□□□□□ -1.11
BRCC3-209ENST00000620502 ZNF280AP59817 542 aaPredicted RBP8.09□□□□□ -1.11
BRCC3-209ENST00000620502 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
BRCC3-209ENST00000620502 TTLL5Q6EMB2 1281 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 SH3BP5LQ7L8J4 393 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 ZNF804AQ7Z570 1209 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 SH3RF1Q7Z6J0 888 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 CERS5Q8N5B7 392 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 MTMR14Q8NCE2 650 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 TRPM4Q8TD43 1214 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 SNRKQ9NRH2 765 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 ZBTB40Q9NUA8 1239 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 DDX19BQ9UMR2 479 aa8.09□□□□□ -1.11
BRCC3-209ENST00000620502 FAM205AQ6ZU69 1335 aa8.08□□□□□ -1.12
BRCC3-209ENST00000620502 PASKQ96RG2 1323 aa8.08□□□□□ -1.12
BRCC3-209ENST00000620502 TFCP2Q12800 502 aa8.08□□□□□ -1.12
BRCC3-209ENST00000620502 TBC1D10BQ4KMP7 808 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-209ENST00000620502 MAP1SQ66K74 1059 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-209ENST00000620502 CEP85Q6P2H3 762 aa8.08□□□□□ -1.12
BRCC3-209ENST00000620502 PDXDC2PQ6P474 469 aa8.08□□□□□ -1.12
BRCC3-209ENST00000620502 BPHLQ86WA6 291 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-209ENST00000620502 CNTROBQ8N137 903 aa8.08□□□□□ -1.12
BRCC3-209ENST00000620502 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-209ENST00000620502 LPIN2Q92539 896 aa8.08□□□□□ -1.12
BRCC3-209ENST00000620502 ARAP2Q8WZ64 1704 aa8.08□□□□□ -1.12
BRCC3-209ENST00000620502 MYO3BQ8WXR4 1341 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 TTC24A2A3L6 582 aaPredicted RBP8.07□□□□□ -1.12
BRCC3-209ENST00000620502 LCE2BO14633 110 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 DGAT1O75907 488 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 IFIT1P09914 478 aaKnown RBP8.07□□□□□ -1.12
BRCC3-209ENST00000620502 SLC5A1P13866 664 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 SMPD1P17405 629 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 TIMM10P62072 90 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 FKBP1AP62942 108 aaKnown RBP8.07□□□□□ -1.12
BRCC3-209ENST00000620502 FMR1Q06787 632 aaKnown RBP eCLIP8.07□□□□□ -1.12
BRCC3-209ENST00000620502 ATP2B3Q16720 1220 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 CAVIN4Q5BKX8 364 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 Q6ZNB5 142 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 SIRT2Q8IXJ6 389 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 MYOZ2Q9NPC6 264 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 IQSEC3Q9UPP2 1182 aaPredicted RBP8.07□□□□□ -1.12
BRCC3-209ENST00000620502 JAG2Q9Y219 1238 aa8.07□□□□□ -1.12
BRCC3-209ENST00000620502 NOP58Q9Y2X3 529 aaKnown RBP8.07□□□□□ -1.12
BRCC3-209ENST00000620502 ASTN2O75129 1339 aaPredicted RBP8.06□□□□□ -1.12
BRCC3-209ENST00000620502 POLR2AP24928 1970 aaKnown RBP8.06□□□□□ -1.12
BRCC3-209ENST00000620502 J3QL48 77 aa8.06□□□□□ -1.12
BRCC3-209ENST00000620502 SURF6O75683 361 aaKnown RBP8.06□□□□□ -1.12
BRCC3-209ENST00000620502 ADORA1P30542 326 aa8.06□□□□□ -1.12
BRCC3-209ENST00000620502 MMP14P50281 582 aa8.06□□□□□ -1.12
BRCC3-209ENST00000620502 RRP1P56182 461 aaKnown RBP8.06□□□□□ -1.12
BRCC3-209ENST00000620502 HTRA3P83110 453 aa8.06□□□□□ -1.12
BRCC3-209ENST00000620502 G3BP1Q13283 466 aaKnown RBP eCLIP8.06□□□□□ -1.12
BRCC3-209ENST00000620502 KIF4BQ2VIQ3 1234 aa8.06□□□□□ -1.12
BRCC3-209ENST00000620502 KIAA0825Q8IV33 1275 aa8.06□□□□□ -1.12
BRCC3-209ENST00000620502 RPAP2Q8IXW5 612 aaPredicted RBP8.06□□□□□ -1.12
BRCC3-209ENST00000620502 ZBED3Q96IU2 234 aaPredicted RBP8.06□□□□□ -1.12
BRCC3-209ENST00000620502 C1QTNF2Q9BXJ5 285 aa8.06□□□□□ -1.12
BRCC3-209ENST00000620502 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 A0A1B0GUL7 405 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 TRAF5O00463 557 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 SCARF1Q14162 830 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 AGERQ15109 404 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 GRIK5Q16478 980 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms