RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 EP400Q96L91 3159 aa18.08■□□□□ 0.49
SEMA3B-214ENST00000619119 USP8P40818 1118 aa18.08■□□□□ 0.48
SEMA3B-214ENST00000619119 NBPF20Q3BBV1 942 aa18.08■□□□□ 0.48
SEMA3B-214ENST00000619119 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.48
SEMA3B-214ENST00000619119 CEP57L1Q8IYX8 460 aa18.08■□□□□ 0.48
SEMA3B-214ENST00000619119 LINC00116Q8NCU8 138 aa18.08■□□□□ 0.48
SEMA3B-214ENST00000619119 IMPACTQ9P2X3 320 aa18.08■□□□□ 0.48
SEMA3B-214ENST00000619119 TTC19Q6DKK2 380 aaPredicted RBP18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 RSRC2Q7L4I2 434 aaKnown RBP18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 RIPOR2Q9Y4F9 1068 aa18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 SH3TC1Q8TE82 1336 aa18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 NEBLO76041 1014 aa18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 GOLGA8FQ08AF8 430 aa18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 GOLGA8DPQ0D2H9 430 aa18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 HDXQ7Z353 690 aa18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 WDR24Q96S15 920 aa18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 FAM204AQ9H8W3 233 aa18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 CALR3Q96L12 384 aaKnown RBP18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 UTP14AQ9BVJ6 771 aaKnown RBP18.07■□□□□ 0.48
SEMA3B-214ENST00000619119 NUP98P52948 1817 aa18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 SEMA3FQ13275 785 aa18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 ZSWIM6Q9HCJ5 1215 aa18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 ANO10Q9NW15 660 aa18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 CCP110O43303 1012 aa18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 TXLNAP40222 546 aa18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 ZAP70P43403 619 aa18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 NAIF1Q69YI7 327 aaPredicted RBP18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 CLIC6Q96NY7 704 aa18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 MYH14Q7Z406 1995 aaKnown RBP18.06■□□□□ 0.48
SEMA3B-214ENST00000619119 BRD3Q15059 726 aa18.05■□□□□ 0.48
SEMA3B-214ENST00000619119 WASHC4Q2M389 1173 aa18.05■□□□□ 0.48
SEMA3B-214ENST00000619119 JAKMIP3Q5VZ66 844 aa18.05■□□□□ 0.48
SEMA3B-214ENST00000619119 RABEP2Q9H5N1 569 aa18.05■□□□□ 0.48
SEMA3B-214ENST00000619119 FBXO3Q9UK99 471 aa18.05■□□□□ 0.48
SEMA3B-214ENST00000619119 SETQ01105 290 aaPredicted RBP18.05■□□□□ 0.48
SEMA3B-214ENST00000619119 BLOC1S2Q6QNY1 142 aa18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 FNBP4Q8N3X1 1017 aaPredicted RBP18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 DHX58Q96C10 678 aa18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 SH2B1Q9NRF2 756 aaPredicted RBP18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 RIC1Q4ADV7 1423 aa18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 A0A0G2JLW4 131 aa18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 PTPN21Q16825 1174 aa18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 BEND6Q5SZJ8 279 aaPredicted RBP18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 PUF60Q9UHX1 559 aaKnown RBP18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 MRFAP1Q9Y605 127 aa18.04■□□□□ 0.48
SEMA3B-214ENST00000619119 TRDNQ13061 729 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 MPHOSPH8Q99549 860 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 NWD2Q9ULI1 1742 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 PAX7P23759 505 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 CCT5P48643 541 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 MAP3K9P80192 1104 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 ZSCAN31Q96LW9 406 aaPredicted RBP18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 LRRC2Q9BYS8 371 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 ABCB6Q9NP58 842 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 CCDC24Q8N4L8 307 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 KCNB2Q92953 911 aa18.03■□□□□ 0.48
SEMA3B-214ENST00000619119 PDE8BO95263 885 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 CYP21A2P08686 494 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 PSMA5P28066 241 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 KCNJ6P48051 423 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 STK3Q13188 491 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 N4BP2L2Q92802 583 aaPredicted RBP18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 MIEF2Q96C03 454 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 DDX11Q96FC9 970 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 VWA3AA6NCI4 1184 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 H0YHG0 523 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 M0R2C6 588 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 RNF113AO15541 343 aaKnown RBP18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 HSPA1LP34931 641 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 MCAMP43121 646 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 SARNPP82979 210 aaKnown RBP18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 SCRN1Q12765 414 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 CCAR1Q8IX12 1150 aaKnown RBP18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 TM6SF1Q9BZW5 370 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 FAM107BQ9H098 131 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 TPCN1Q9ULQ1 816 aa18.02■□□□□ 0.48
SEMA3B-214ENST00000619119 MAST3O60307 1309 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 KINO60870 393 aaKnown RBP18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 PDCP20941 246 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 ELF1P32519 619 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 FAM71BQ8TC56 605 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 OSBP2Q969R2 916 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 PHKA1P46020 1223 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 PNKPQ96T60 521 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 SRP68Q9UHB9 627 aaKnown RBP18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 FAM169AQ9Y6X4 670 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 CALRP27797 417 aaKnown RBP18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 ZMYM1Q5SVZ6 1142 aa18.01■□□□□ 0.47
SEMA3B-214ENST00000619119 NTSR2O95665 410 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 FOSBP53539 338 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 ATP2B2Q01814 1243 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 CCDC73Q6ZRK6 1079 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 VGLL2Q8N8G2 317 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 NAT10Q9H0A0 1025 aaKnown RBP18■□□□□ 0.47
SEMA3B-214ENST00000619119 GOLPH3LQ9H4A5 285 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 GNPATO15228 680 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 ERLIN1O75477 346 aa18■□□□□ 0.47
SEMA3B-214ENST00000619119 CHMP4BP1P59074 171 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms