RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 LBHD1Q9BQE6 289 aaPredicted RBP9.14□□□□□ -0.95
SCAMP1-206ENST00000618166 PANK3Q9H999 370 aa9.14□□□□□ -0.95
SCAMP1-206ENST00000618166 CHD9Q3L8U1 2897 aa9.14□□□□□ -0.95
SCAMP1-206ENST00000618166 U2SURPO15042 1029 aaKnown RBP9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 CYP2C8P10632 490 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 COL6A1P12109 1028 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 BMP1P13497 986 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 CAPN2P17655 700 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 TFF2Q03403 129 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 SNAPC2Q13487 334 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 PDE3AQ14432 1141 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 E2F4Q16254 413 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 KMT5BQ4FZB7 885 aa9.13□□□□□ -0.95
SCAMP1-206ENST00000618166 F8W031 263 aaPredicted RBP9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 GPR37L1O60883 481 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 KLRK1P26718 216 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 KCNQ1P51787 676 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 ZKSCAN4Q969J2 545 aaPredicted RBP9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 TEPSINQ96N21 525 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 PHOX2BQ99453 314 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 SLC6A16Q9GZN6 736 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 OGDHLQ9ULD0 1010 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 CSADQ9Y600 493 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 C5orf42Q9H799 3197 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 TCF20Q9UGU0 1960 aaKnown RBP9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 XDHP47989 1333 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 GTF2IP78347 998 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 AIMP1Q12904 312 aaKnown RBP9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 IRF5Q13568 498 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 MOGSQ13724 837 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 CFAP100Q494V2 611 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 TTLL5Q6EMB2 1281 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 ANKRD23Q86SG2 305 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 MTMR14Q8NCE2 650 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 CCDC85AQ96PX6 553 aaPredicted RBP9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 TMEM39BQ9GZU3 492 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 TOR4AQ9NXH8 423 aa9.12□□□□□ -0.95
SCAMP1-206ENST00000618166 MGAMO43451 1857 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 LTBP2Q14767 1821 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 TNPO2O14787 897 aaKnown RBP9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 AXIN1O15169 862 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 ATP2B4P23634 1241 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 DNAJB2P25686 324 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 PRKAR2BP31323 418 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 EIF4A1P60842 406 aaKnown RBP9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 FOXC1Q12948 553 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 CTC1Q2NKJ3 1217 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 ERO1BQ86YB8 467 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 MED23Q9ULK4 1368 aa9.11□□□□□ -0.95
SCAMP1-206ENST00000618166 SMIM22K7EJ46 135 aa9.1□□□□□ -0.95
SCAMP1-206ENST00000618166 U2AF1L5P0DN76 240 aaPredicted RBP9.1□□□□□ -0.95
SCAMP1-206ENST00000618166 U2AF1Q01081 240 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCAMP1-206ENST00000618166 TAF7Q15545 349 aaPredicted RBP9.1□□□□□ -0.95
SCAMP1-206ENST00000618166 COPS6Q7L5N1 327 aa9.1□□□□□ -0.95
SCAMP1-206ENST00000618166 PRDM12Q9H4Q4 367 aa9.1□□□□□ -0.95
SCAMP1-206ENST00000618166 ZNF576Q9H609 170 aa9.1□□□□□ -0.95
SCAMP1-206ENST00000618166 TMEM134Q9H6X4 195 aa9.1□□□□□ -0.95
SCAMP1-206ENST00000618166 ATP5J2-PTCD1G3V325 749 aa9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 NR1I2O75469 434 aa9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 KRT37O76014 449 aa9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 PPIL2Q13356 520 aa9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 SUZ12Q15022 739 aaKnown RBP9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 RTF1Q92541 710 aaKnown RBP9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 BADQ92934 168 aa9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 FBXL18Q96ME1 805 aa9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 COA1Q9GZY4 146 aa9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 HMX1Q9NP08 348 aaPredicted RBP9.09□□□□□ -0.95
SCAMP1-206ENST00000618166 MAST2Q6P0Q8 1798 aa9.09□□□□□ -0.96
SCAMP1-206ENST00000618166 ECM29Q5VYK3 1845 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 CHD7Q9P2D1 2997 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 TCP10L2B9ZVM9 353 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 IRS4O14654 1257 aaPredicted RBP9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 MYO1BO43795 1136 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 HMGCRP04035 888 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 CFHP08603 1231 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 EIF2S2P20042 333 aaKnown RBP9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 RPIAP49247 311 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 MMP14P50281 582 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 HSP90AB3PQ58FF7 597 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 AKNAD1Q5T1N1 836 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 GPAT2Q6NUI2 795 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 ANKS1AQ92625 1134 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 WRNIP1Q96S55 665 aa9.08□□□□□ -0.96
SCAMP1-206ENST00000618166 RBM5P52756 815 aaKnown RBP eCLIP9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 EPHB4P54760 987 aa9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 RIC3Q7Z5B4 369 aa9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 PARK7Q99497 189 aaKnown RBP9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 GAS2L1Q99501 681 aaPredicted RBP9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 RSPH6AQ9H0K4 717 aa9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 TDRD3Q9H7E2 651 aaKnown RBP9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 CXXC1Q9P0U4 656 aaPredicted RBP9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 ZNF70Q9UC06 446 aaPredicted RBP9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 JAG2Q9Y219 1238 aa9.07□□□□□ -0.96
SCAMP1-206ENST00000618166 IGFBP4P22692 258 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms