RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 TRIM34Q9BYJ4 488 aa20.55■□□□□ 0.88
LTBP4-235ENST00000617753 ANTXR1Q9H6X2 564 aa20.55■□□□□ 0.88
LTBP4-235ENST00000617753 HERC5Q9UII4 1024 aaKnown RBP20.55■□□□□ 0.88
LTBP4-235ENST00000617753 DYNLL1P63167 89 aaKnown RBP20.54■□□□□ 0.88
LTBP4-235ENST00000617753 TMED8Q6PL24 325 aaPredicted RBP20.54■□□□□ 0.88
LTBP4-235ENST00000617753 PARK7Q99497 189 aaKnown RBP20.54■□□□□ 0.88
LTBP4-235ENST00000617753 PTPN22Q9Y2R2 807 aa20.54■□□□□ 0.88
LTBP4-235ENST00000617753 AFG3L2Q9Y4W6 797 aa20.54■□□□□ 0.88
LTBP4-235ENST00000617753 CDK5RAP2Q96SN8 1893 aa20.54■□□□□ 0.88
LTBP4-235ENST00000617753 A0A0G2JLL6 359 aaPredicted RBP20.53■□□□□ 0.88
LTBP4-235ENST00000617753 TRIM75PA6NK02 468 aa20.53■□□□□ 0.88
LTBP4-235ENST00000617753 MOGSQ13724 837 aa20.53■□□□□ 0.88
LTBP4-235ENST00000617753 GADL1Q6ZQY3 521 aa20.53■□□□□ 0.88
LTBP4-235ENST00000617753 PRRT2Q7Z6L0 340 aaPredicted RBP20.53■□□□□ 0.88
LTBP4-235ENST00000617753 CRACR2BQ8N4Y2 399 aaPredicted RBP20.53■□□□□ 0.88
LTBP4-235ENST00000617753 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.53■□□□□ 0.88
LTBP4-235ENST00000617753 DNAJC2Q99543 621 aaKnown RBP20.53■□□□□ 0.88
LTBP4-235ENST00000617753 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.53■□□□□ 0.88
LTBP4-235ENST00000617753 FOCADQ5VW36 1801 aa20.53■□□□□ 0.88
LTBP4-235ENST00000617753 HLA-DOAP06340 250 aa20.52■□□□□ 0.88
LTBP4-235ENST00000617753 USP5P45974 858 aa20.52■□□□□ 0.88
LTBP4-235ENST00000617753 LACTBP83111 547 aaPredicted RBP20.52■□□□□ 0.88
LTBP4-235ENST00000617753 CCDC84Q86UT8 332 aaPredicted RBP20.52■□□□□ 0.88
LTBP4-235ENST00000617753 SAP30BPQ9UHR5 308 aaKnown RBP20.52■□□□□ 0.88
LTBP4-235ENST00000617753 CPA4Q9UI42 421 aa20.52■□□□□ 0.88
LTBP4-235ENST00000617753 PALD1Q9ULE6 856 aa20.52■□□□□ 0.88
LTBP4-235ENST00000617753 GOLIM4O00461 696 aa20.51■□□□□ 0.87
LTBP4-235ENST00000617753 CAP2P40123 477 aa20.51■□□□□ 0.87
LTBP4-235ENST00000617753 CAP1Q01518 475 aa20.51■□□□□ 0.87
LTBP4-235ENST00000617753 GPAT2Q6NUI2 795 aa20.51■□□□□ 0.87
LTBP4-235ENST00000617753 PHIPQ8WWQ0 1821 aa20.5■□□□□ 0.87
LTBP4-235ENST00000617753 ATAD5Q96QE3 1844 aa20.5■□□□□ 0.87
LTBP4-235ENST00000617753 C17orf99Q6UX52 265 aa20.5■□□□□ 0.87
LTBP4-235ENST00000617753 FOXP4Q8IVH2 680 aaPredicted RBP20.5■□□□□ 0.87
LTBP4-235ENST00000617753 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
LTBP4-235ENST00000617753 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
LTBP4-235ENST00000617753 PTPRFP10586 1907 aa20.5■□□□□ 0.87
LTBP4-235ENST00000617753 SIPA1L1O43166 1804 aa20.49■□□□□ 0.87
LTBP4-235ENST00000617753 ECM2O94769 699 aaPredicted RBP20.49■□□□□ 0.87
LTBP4-235ENST00000617753 CYP2C8P10632 490 aa20.49■□□□□ 0.87
LTBP4-235ENST00000617753 SLC4A8Q2Y0W8 1093 aa20.49■□□□□ 0.87
LTBP4-235ENST00000617753 SLC9C2Q5TAH2 1124 aa20.49■□□□□ 0.87
LTBP4-235ENST00000617753 ZNF280CQ8ND82 737 aa20.49■□□□□ 0.87
LTBP4-235ENST00000617753 ARHGAP39Q9C0H5 1083 aa20.49■□□□□ 0.87
LTBP4-235ENST00000617753 AS3MTQ9HBK9 375 aa20.49■□□□□ 0.87
LTBP4-235ENST00000617753 ADGRA2Q96PE1 1338 aa20.49■□□□□ 0.87
LTBP4-235ENST00000617753 USP17L5A8MUK1 530 aa20.48■□□□□ 0.87
LTBP4-235ENST00000617753 GNRH1P01148 92 aa20.48■□□□□ 0.87
LTBP4-235ENST00000617753 PDE6AP16499 860 aa20.48■□□□□ 0.87
LTBP4-235ENST00000617753 SPP2Q13103 211 aa20.48■□□□□ 0.87
LTBP4-235ENST00000617753 RRP1BQ14684 758 aaKnown RBP20.48■□□□□ 0.87
LTBP4-235ENST00000617753 SLC45A1Q9Y2W3 748 aa20.48■□□□□ 0.87
LTBP4-235ENST00000617753 MAGEB6P1A0A0J9YX57 407 aa20.47■□□□□ 0.87
LTBP4-235ENST00000617753 ASNSP08243 561 aa20.47■□□□□ 0.87
LTBP4-235ENST00000617753 SMCR8Q8TEV9 937 aaPredicted RBP20.47■□□□□ 0.87
LTBP4-235ENST00000617753 BOLA2Q9H3K6 86 aa20.47■□□□□ 0.87
LTBP4-235ENST00000617753 PAG1Q9NWQ8 432 aa20.47■□□□□ 0.87
LTBP4-235ENST00000617753 AGTPBP1Q9UPW5 1226 aa20.47■□□□□ 0.87
LTBP4-235ENST00000617753 PTCH2Q9Y6C5 1203 aa20.47■□□□□ 0.87
LTBP4-235ENST00000617753 MYH1P12882 1939 aa20.47■□□□□ 0.87
LTBP4-235ENST00000617753 ZSWIM8A7E2V4 1837 aa20.46■□□□□ 0.87
LTBP4-235ENST00000617753 ATP5JP18859 108 aa20.46■□□□□ 0.87
LTBP4-235ENST00000617753 PSMC4P43686 418 aa20.46■□□□□ 0.87
LTBP4-235ENST00000617753 SLC9C1Q4G0N8 1177 aa20.46■□□□□ 0.87
LTBP4-235ENST00000617753 METTL16Q86W50 562 aaKnown RBP20.46■□□□□ 0.87
LTBP4-235ENST00000617753 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
LTBP4-235ENST00000617753 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
LTBP4-235ENST00000617753 DNAJC18Q9H819 358 aa20.46■□□□□ 0.87
LTBP4-235ENST00000617753 ZNF532Q9HCE3 1301 aa20.46■□□□□ 0.87
LTBP4-235ENST00000617753 SMARCA5O60264 1052 aaPredicted RBP20.45■□□□□ 0.86
LTBP4-235ENST00000617753 FMNL1O95466 1100 aaPredicted RBP20.45■□□□□ 0.86
LTBP4-235ENST00000617753 HMGCS2P54868 508 aa20.45■□□□□ 0.86
LTBP4-235ENST00000617753 PRMT2P55345 433 aa20.45■□□□□ 0.86
LTBP4-235ENST00000617753 NBPF11Q86T75 865 aa20.45■□□□□ 0.86
LTBP4-235ENST00000617753 PROCA1Q8NCQ7 364 aaPredicted RBP20.45■□□□□ 0.86
LTBP4-235ENST00000617753 EDC3Q96F86 508 aaKnown RBP20.45■□□□□ 0.86
LTBP4-235ENST00000617753 RIOK1Q9BRS2 568 aaKnown RBP20.45■□□□□ 0.86
LTBP4-235ENST00000617753 CRNKL1Q9BZJ0 848 aaKnown RBP20.45■□□□□ 0.86
LTBP4-235ENST00000617753 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.45■□□□□ 0.866e-11■■■■□ 25.1
LTBP4-235ENST00000617753 PNMA3Q9UL41 463 aa20.45■□□□□ 0.86
LTBP4-235ENST00000617753 HTTP42858 3142 aa20.45■□□□□ 0.86
LTBP4-235ENST00000617753 GDF11O95390 407 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 BCRP11274 1271 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 HOXD10P28358 340 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 RRP1P56182 461 aaKnown RBP20.44■□□□□ 0.86
LTBP4-235ENST00000617753 TREML2Q5T2D2 321 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 TTC6Q86TZ1 520 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 HAUS7Q99871 368 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 GINM1Q9NU53 330 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 SERPINB13Q9UIV8 391 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 ZBTB21Q9ULJ3 1066 aa20.44■□□□□ 0.86
LTBP4-235ENST00000617753 FCGRTP55899 365 aa20.43■□□□□ 0.86
LTBP4-235ENST00000617753 PABPC4Q13310 644 aaKnown RBP eCLIP20.43■□□□□ 0.86
LTBP4-235ENST00000617753 TRIM47Q96LD4 638 aa20.43■□□□□ 0.86
LTBP4-235ENST00000617753 WDR18Q9BV38 432 aa20.43■□□□□ 0.86
LTBP4-235ENST00000617753 EHD4Q9H223 541 aa20.43■□□□□ 0.86
LTBP4-235ENST00000617753 LOC285556D6RIA3 1793 aa20.43■□□□□ 0.86
LTBP4-235ENST00000617753 NAV1Q8NEY1 1877 aa20.43■□□□□ 0.86
LTBP4-235ENST00000617753 POLR3DP05423 398 aaPredicted RBP20.42■□□□□ 0.86
LTBP4-235ENST00000617753 CTGFP29279 349 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms