RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 COG6Q9Y2V7 657 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 MYH2Q9UKX2 1941 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 TRIM75PA6NK02 468 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 RAB11FIP3O75154 756 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
TARDBP-218ENST00000617172 CYP7A1P22680 504 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 PSMC4P43686 418 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 CAP1Q01518 475 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
TARDBP-218ENST00000617172 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 AS3MTQ9HBK9 375 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 PIH1D3Q9NQM4 214 aaKnown RBP11.79□□□□□ -0.52
TARDBP-218ENST00000617172 GINM1Q9NU53 330 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 CPA4Q9UI42 421 aa11.79□□□□□ -0.52
TARDBP-218ENST00000617172 USP17L5A8MUK1 530 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
TARDBP-218ENST00000617172 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 ASNSP08243 561 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 SPP2Q13103 211 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 GADL1Q6ZQY3 521 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 CRACR2BQ8N4Y2 399 aaPredicted RBP11.78□□□□□ -0.52
TARDBP-218ENST00000617172 PROCA1Q8NCQ7 364 aaPredicted RBP11.78□□□□□ -0.52
TARDBP-218ENST00000617172 ZNF280CQ8ND82 737 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.78□□□□□ -0.52
TARDBP-218ENST00000617172 ZNF333Q96JL9 665 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 AGTPBP1Q9UPW5 1226 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 PTCH2Q9Y6C5 1203 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 ADGRA2Q96PE1 1338 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 AK9Q5TCS8 1911 aa11.78□□□□□ -0.52
TARDBP-218ENST00000617172 HTTP42858 3142 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 IFIT2P09913 472 aaKnown RBP11.77□□□□□ -0.53
TARDBP-218ENST00000617172 SLURP2P0DP57 97 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 CYP2C8P10632 490 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 BCRP11274 1271 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 KCNA4P22459 653 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 FCGRTP55899 365 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 PABPC4Q13310 644 aaKnown RBP eCLIP11.77□□□□□ -0.53
TARDBP-218ENST00000617172 ADGRA1Q86SQ6 560 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 MAPKAPK5Q8IW41 473 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 MAGEB6Q8N7X4 407 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 SMCR8Q8TEV9 937 aaPredicted RBP11.77□□□□□ -0.53
TARDBP-218ENST00000617172 ARHGAP39Q9C0H5 1083 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 IL1RAPL2Q9NP60 686 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 SRRDQ9UH36 339 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 FLT1P17948 1338 aa11.77□□□□□ -0.53
TARDBP-218ENST00000617172 FAM196BA6NMK8 535 aa11.76□□□□□ -0.53
TARDBP-218ENST00000617172 USP5P45974 858 aa11.76□□□□□ -0.53
TARDBP-218ENST00000617172 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
TARDBP-218ENST00000617172 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
TARDBP-218ENST00000617172 SIRT2Q8IXJ6 389 aa11.76□□□□□ -0.53
TARDBP-218ENST00000617172 TRIM47Q96LD4 638 aa11.76□□□□□ -0.53
TARDBP-218ENST00000617172 WDR18Q9BV38 432 aa11.76□□□□□ -0.53
TARDBP-218ENST00000617172 PALD1Q9ULE6 856 aa11.76□□□□□ -0.53
TARDBP-218ENST00000617172 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
TARDBP-218ENST00000617172 C19orf81C9J6K1 198 aa11.75□□□□□ -0.53
TARDBP-218ENST00000617172 OSBPP22059 807 aa11.75□□□□□ -0.53
TARDBP-218ENST00000617172 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-218ENST00000617172 DYNLL1P63167 89 aaKnown RBP11.75□□□□□ -0.53
TARDBP-218ENST00000617172 TTC6Q86TZ1 520 aa11.75□□□□□ -0.53
TARDBP-218ENST00000617172 MIGA1Q8NAN2 632 aa11.75□□□□□ -0.53
TARDBP-218ENST00000617172 RAET1EQ8TD07 263 aa11.75□□□□□ -0.53
TARDBP-218ENST00000617172 ANTXR1Q9H6X2 564 aa11.75□□□□□ -0.53
TARDBP-218ENST00000617172 CENPFP49454 3210 aa11.75□□□□□ -0.53
TARDBP-218ENST00000617172 APBB1O00213 710 aa11.74□□□□□ -0.53
TARDBP-218ENST00000617172 GRK4P32298 578 aa11.74□□□□□ -0.53
TARDBP-218ENST00000617172 BACE1P56817 501 aa11.74□□□□□ -0.53
TARDBP-218ENST00000617172 RRP1BQ14684 758 aaKnown RBP11.74□□□□□ -0.53
TARDBP-218ENST00000617172 SLC9C2Q5TAH2 1124 aa11.74□□□□□ -0.53
TARDBP-218ENST00000617172 PRPF38BQ5VTL8 546 aaKnown RBP11.74□□□□□ -0.53
TARDBP-218ENST00000617172 EHD4Q9H223 541 aa11.74□□□□□ -0.53
TARDBP-218ENST00000617172 TMOD4Q9NZQ9 345 aa11.74□□□□□ -0.53
TARDBP-218ENST00000617172 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.74□□□□□ -0.53
TARDBP-218ENST00000617172 SERPINB13Q9UIV8 391 aa11.74□□□□□ -0.53
TARDBP-218ENST00000617172 MYPNQ86TC9 1320 aa11.74□□□□□ -0.53
TARDBP-218ENST00000617172 MAGEB6P1A0A0J9YX57 407 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 USP17L10C9JJH3 530 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 CAPN2P17655 700 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 ATP5JP18859 108 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 EN2P19622 333 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-218ENST00000617172 CTGFP29279 349 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 HOXA7P31268 230 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-218ENST00000617172 HMGCS2P54868 508 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 FAM110CQ1W6H9 321 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 TREML2Q5T2D2 321 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 CCDC84Q86UT8 332 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-218ENST00000617172 NKX2-3Q8TAU0 364 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 SH3TC2Q8TF17 1288 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 DOCK2Q92608 1830 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 COA7Q96BR5 231 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 RIOK1Q9BRS2 568 aaKnown RBP11.73□□□□□ -0.53
TARDBP-218ENST00000617172 CRNKL1Q9BZJ0 848 aaKnown RBP11.73□□□□□ -0.53
TARDBP-218ENST00000617172 SAP30BPQ9UHR5 308 aaKnown RBP11.73□□□□□ -0.53
TARDBP-218ENST00000617172 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 NDUFB9Q9Y6M9 179 aa11.73□□□□□ -0.53
TARDBP-218ENST00000617172 TNRC18O15417 2968 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-218ENST00000617172 GOLIM4O00461 696 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 TNPO2O14787 897 aaKnown RBP11.72□□□□□ -0.53
TARDBP-218ENST00000617172 PDE6AP16499 860 aa11.72□□□□□ -0.53
TARDBP-218ENST00000617172 UBXN2AP68543 259 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms