RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 KRI1Q8N9T8 703 aaKnown RBP7.57□□□□□ -1.2
LMO3-235ENST00000616247 HAUS7Q99871 368 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 UBXN6Q9BZV1 441 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 MYO6Q9UM54 1294 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 CAPN7Q9Y6W3 813 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 ADGRL3Q9HAR2 1447 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 A0A087WUV0 522 aaPredicted RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 GOLGA8AA7E2F4 631 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 NEURL1BA8MQ27 555 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 BTBD18B2RXH4 712 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 RNF113AO15541 343 aaKnown RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 ATP2C2O75185 946 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 SSBP05455 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
LMO3-235ENST00000616247 ATP1A2P50993 1020 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 GRIN1Q05586 938 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 CT47A1Q5JQC4 288 aaPredicted RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 MCTP2Q6DN12 878 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 ANKRD13DQ6ZTN6 518 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 EFCAB13Q8IY85 973 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 GIMAP7Q8NHV1 300 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 SIRT1Q96EB6 747 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 JPH2Q9BR39 696 aaPredicted RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 BRMS1Q9HCU9 246 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 GEMIN8Q9NWZ8 242 aaKnown RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 TAB2Q9NYJ8 693 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 DENND2AQ9ULE3 1009 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 MAST3O60307 1309 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 KIF20BQ96Q89 1820 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 M0R2C6 588 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 IDH1O75874 414 aaKnown RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 FGAP02671 866 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 BMP6P22004 513 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 KRT9P35527 623 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 GGCXP38435 758 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 GNGT1P63211 74 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 ATP2B2Q01814 1243 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 PTPN12Q05209 780 aaKnown RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 CCDC70Q6NSX1 233 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 SND1Q7KZF4 910 aaKnown RBP eCLIP7.56□□□□□ -1.2
LMO3-235ENST00000616247 NOC3LQ8WTT2 800 aaKnown RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 FAM169AQ9Y6X4 670 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 KDRP35968 1356 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 PLEKHG3A1L390 1219 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 B4E1Z4 1266 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 NDUFAB1O14561 156 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 ECM2O94769 699 aaPredicted RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 USP8P40818 1118 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
LMO3-235ENST00000616247 KCTD16Q68DU8 428 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 USP49Q70CQ1 688 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 OTUD6BQ8N6M0 293 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 MLKLQ8NB16 471 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 ZKSCAN3Q9BRR0 538 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 MED4Q9NPJ6 270 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 DDX21Q9NR30 783 aaKnown RBP eCLIP7.56□□□□□ -1.2
LMO3-235ENST00000616247 TUBE1Q9UJT0 475 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 AMOTL2Q9Y2J4 779 aa7.56□□□□□ -1.2
LMO3-235ENST00000616247 MACROD2A1Z1Q3 448 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 GOLGA6BA6NDN3 693 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 NAP1L1P55209 391 aaKnown RBP7.55□□□□□ -1.2
LMO3-235ENST00000616247 SF3A3Q12874 501 aaKnown RBP eCLIP7.55□□□□□ -1.2
LMO3-235ENST00000616247 CCDC122Q5T0U0 273 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 CEP57Q86XR8 500 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 TEX2Q8IWB9 1127 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 TTC5Q8N0Z6 440 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 DSCC1Q9BVC3 393 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 TEX13AQ9BXU3 409 aaPredicted RBP7.55□□□□□ -1.2
LMO3-235ENST00000616247 INCENPQ9NQS7 918 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 HELLSQ9NRZ9 838 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 GNL3LQ9NVN8 582 aaKnown RBP7.55□□□□□ -1.2
LMO3-235ENST00000616247 CEP126Q9P2H0 1117 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 ROBO2Q9HCK4 1378 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 hCG_1642624A0A1W2PR95 340 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 RNMTO43148 476 aaKnown RBP7.55□□□□□ -1.2
LMO3-235ENST00000616247 ZBTB43O43298 467 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 CDKL5O76039 1030 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 A1BGP04217 495 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 TDO2P48775 406 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 FXR1P51114 621 aaKnown RBP eCLIP7.55□□□□□ -1.2
LMO3-235ENST00000616247 TMEM67Q5HYA8 995 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 PI16Q6UXB8 463 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 GBP6Q6ZN66 633 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 ANKRD24Q8TF21 1146 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 CXorf56Q9H5V9 222 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 KAT14Q9H8E8 782 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 PIK3C2BO00750 1634 aa7.55□□□□□ -1.2
LMO3-235ENST00000616247 CEP170BQ9Y4F5 1589 aaPredicted RBP7.55□□□□□ -1.2
LMO3-235ENST00000616247 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 IFIT3O14879 490 aaKnown RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 ATP6V1AP38606 617 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 LRRC24Q50LG9 513 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 RRAGBQ5VZM2 374 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 DIS3L2Q8IYB7 885 aaKnown RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 BLZF1Q9H2G9 400 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 CABP5Q9NP86 173 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 CTNND2Q9UQB3 1225 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 USP6P35125 1406 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 SYNRGQ9UMZ2 1314 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 SETD1BQ9UPS6 1966 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms