RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 SERTAD1Q9UHV2 236 aa10.15□□□□□ -0.78
PDLIM5-222ENST00000615540 TCERG1LQ5VWI1 586 aa10.15□□□□□ -0.78
PDLIM5-222ENST00000615540 PKD2L1Q9P0L9 805 aa10.15□□□□□ -0.78
PDLIM5-222ENST00000615540 CGNQ9P2M7 1197 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-222ENST00000615540 PXDNQ92626 1479 aa10.15□□□□□ -0.78
PDLIM5-222ENST00000615540 ERBB4Q15303 1308 aa10.15□□□□□ -0.78
PDLIM5-222ENST00000615540 TFAP4Q01664 338 aa10.15□□□□□ -0.79
PDLIM5-222ENST00000615540 DOK7Q18PE1 504 aa10.15□□□□□ -0.79
PDLIM5-222ENST00000615540 TTC38Q5R3I4 469 aa10.15□□□□□ -0.79
PDLIM5-222ENST00000615540 AIFM3Q96NN9 605 aa10.15□□□□□ -0.79
PDLIM5-222ENST00000615540 SAMM50Q9Y512 469 aa10.15□□□□□ -0.79
PDLIM5-222ENST00000615540 CAVIN2O95810 425 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 ZDHHC9Q9Y397 364 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 NEDD4P46934 1319 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 PLS1Q14651 629 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 SCNN1DP51172 638 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 RPS8P62241 208 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 LONRF3Q496Y0 759 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 TMCO3Q6UWJ1 677 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 DTHD1Q6ZMT9 781 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 PDCL3Q9H2J4 239 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 TTLL11Q8NHH1 800 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 BIN2Q9UBW5 565 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 TNKSO95271 1327 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 DYNC1I1O14576 645 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 FANCCQ00597 558 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 TSC1Q92574 1164 aa10.14□□□□□ -0.79
PDLIM5-222ENST00000615540 A0A0G2JLW4 131 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 TRIM21P19474 475 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 GOLGA8FQ08AF8 430 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 GOLGA8DPQ0D2H9 430 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 ZYXQ15942 572 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 ZNF827Q17R98 1081 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 IBSPP21815 317 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 IL6STP40189 918 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 RASGRF1Q13972 1273 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 ATL3Q6DD88 541 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 RPAP1Q9BWH6 1393 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 GPR108Q9NPR9 543 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 ZBTB21Q9ULJ3 1066 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 PAXBP1Q9Y5B6 917 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 KIF2AO00139 706 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 MYL5Q02045 173 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 C11orf57Q6ZUT1 292 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 TBC1D10CQ8IV04 446 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 SMARCC2Q8TAQ2 1214 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 PRIMPOLQ96LW4 560 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 NRBP1Q9UHY1 535 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 TECPR2O15040 1411 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 CUTAO60888 179 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 ARID5AQ03989 594 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 POSTNQ15063 836 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 VPS16Q9H269 839 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 GNAQP50148 359 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 GTF2IP78347 998 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 LRMPQ12912 555 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 TNIP1Q15025 636 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 HS1BP3Q53T59 392 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 RILPL1Q5EBL4 403 aa10.13□□□□□ -0.79
PDLIM5-222ENST00000615540 PDIA6Q15084 440 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 USH1GQ495M9 461 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 PALLDQ8WX93 1383 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 ERLIN1O75477 346 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 BMP15O95972 392 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 TXKP42681 527 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 CYB5R4Q7L1T6 521 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 SYNRGQ9UMZ2 1314 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 SCARF1Q14162 830 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 CAPZA3Q96KX2 299 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 TTC14Q96N46 770 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.12□□□□□ -0.793e-6■■□□□ 11.9
PDLIM5-222ENST00000615540 PXDNLA1KZ92 1463 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 BTBD18B2RXH4 712 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 CHMP2AO43633 222 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 MYO1BO43795 1136 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 CALML3P27482 149 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 DPP8Q6V1X1 898 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 FAM114A1Q8IWE2 563 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 JADE2Q9NQC1 790 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 TBC1D7Q9P0N9 293 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 ANKRD26Q9UPS8 1709 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 KCNQ2O43526 872 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 CYP2E1P05181 493 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 BTDP43251 543 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 WWC2Q6AWC2 1192 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 ATG9AQ7Z3C6 839 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 GRAMD1CQ8IYS0 662 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 CTAGE1Q96RT6 745 aa10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 PYM1Q9BRP8 204 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 PUF60Q9UHX1 559 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-222ENST00000615540 LRRC47Q8N1G4 583 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 ZNF804BA4D1E1 1349 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 SH2B2O14492 632 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 CYP19A1P11511 503 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 SSR1P43307 286 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 NOSTRINQ8IVI9 506 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 TAF6LQ9Y6J9 622 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 RIOK3O14730 519 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms