RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 FSIP1Q8NA03 581 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 FANCBQ8NB91 859 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 ZNF384Q8TF68 577 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 RPGRQ92834 1020 aaKnown RBP13.86□□□□□ -0.19
USP6NL-206ENST00000609853 QTRT2Q9H974 415 aaKnown RBP13.86□□□□□ -0.19
USP6NL-206ENST00000609853 LRRC4BQ9NT99 713 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 ARPP21Q9UBL0 812 aaPredicted RBP13.86□□□□□ -0.19
USP6NL-206ENST00000609853 USP25Q9UHP3 1055 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 ZNF500O60304 480 aaPredicted RBP13.85□□□□□ -0.19
USP6NL-206ENST00000609853 RANBP6O60518 1105 aaKnown RBP13.85□□□□□ -0.19
USP6NL-206ENST00000609853 PPP6R2O75170 966 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 PTMAP06454 111 aaKnown RBP13.85□□□□□ -0.19
USP6NL-206ENST00000609853 TPM3P06753 285 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 KLRK1P26718 216 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 DYNLL1P63167 89 aaKnown RBP13.85□□□□□ -0.19
USP6NL-206ENST00000609853 PRR5LQ6MZQ0 368 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 CTR9Q6PD62 1173 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 CKAP2LQ8IYA6 745 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 PHKBQ93100 1093 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
USP6NL-206ENST00000609853 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 FTOQ9C0B1 505 aaKnown RBP eCLIP13.85□□□□□ -0.19
USP6NL-206ENST00000609853 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
USP6NL-206ENST00000609853 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 MYH6P13533 1939 aa13.85□□□□□ -0.19
USP6NL-206ENST00000609853 BBOX1O75936 387 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 GYS1P13807 737 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 RXRAP19793 462 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 CMA1P23946 247 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 TMC4Q7Z404 712 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 CATIPQ7Z7H3 387 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 DZIP1Q86YF9 867 aaKnown RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 FMR1NBQ8N0W7 255 aaPredicted RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 CRACR2BQ8N4Y2 399 aaPredicted RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 TDRD7Q8NHU6 1098 aaKnown RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 CLIC4Q9Y696 253 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 TNKSO95271 1327 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 KIF28PB7ZC32 967 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 LDHCP07864 332 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 CHAF1AQ13111 956 aaPredicted RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 STX1AQ16623 288 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 ANO6Q4KMQ2 910 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 RNF26Q9BY78 433 aaPredicted RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 FOXP1Q9H334 677 aaPredicted RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
USP6NL-206ENST00000609853 DCP1AQ9NPI6 582 aaPredicted RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.84□□□□□ -0.19
USP6NL-206ENST00000609853 USP17L12C9JPN9 530 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 USP17L21D6R901 530 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 DDAH1O94760 285 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 MMP1P03956 469 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 SERPINB2P05120 415 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
USP6NL-206ENST00000609853 XBP1P17861 261 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
USP6NL-206ENST00000609853 PDE4BQ07343 736 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 IFIT1BQ5T764 474 aaKnown RBP13.83□□□□□ -0.2
USP6NL-206ENST00000609853 KRT27Q7Z3Y8 459 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 CCDC24Q8N4L8 307 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 MYL10Q9BUA6 226 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP6NL-206ENST00000609853 ANO10Q9NW15 660 aa13.83□□□□□ -0.2
USP6NL-206ENST00000609853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP6NL-206ENST00000609853 GOLGA6L6A8MZA4 724 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 BAG3O95817 575 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 PRDX5P30044 214 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 ZNF165P49910 485 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 PPP4CP60510 307 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 AKAP17AQ02040 695 aaKnown RBP13.82□□□□□ -0.2
USP6NL-206ENST00000609853 CCDC178Q5BJE1 867 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 TXNRD3Q86VQ6 643 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 NOSTRINQ8IVI9 506 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 ENAHQ8N8S7 591 aaPredicted RBP13.82□□□□□ -0.2
USP6NL-206ENST00000609853 TIGD1Q96MW7 591 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 CBX8Q9HC52 389 aa13.82□□□□□ -0.2
USP6NL-206ENST00000609853 AATFQ9NY61 560 aaKnown RBP eCLIP13.82□□□□□ -0.2
USP6NL-206ENST00000609853 FAM237AA0A1B0GTK4 181 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 KLRG2A4D1S0 409 aaPredicted RBP13.81□□□□□ -0.2
USP6NL-206ENST00000609853 RILPL1Q5EBL4 403 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 AXDND1Q5T1B0 1012 aaPredicted RBP13.81□□□□□ -0.2
USP6NL-206ENST00000609853 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 CRAMP1Q96RY5 1269 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 SDF4Q9BRK5 362 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 NOL10Q9BSC4 688 aaKnown RBP13.81□□□□□ -0.2
USP6NL-206ENST00000609853 NAT10Q9H0A0 1025 aaKnown RBP13.81□□□□□ -0.2
USP6NL-206ENST00000609853 GJB4Q9NTQ9 266 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 PODXL2Q9NZ53 605 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 BRWD3Q6RI45 1802 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 PRPF3O43395 683 aaKnown RBP13.81□□□□□ -0.2
USP6NL-206ENST00000609853 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
USP6NL-206ENST00000609853 NUP133Q8WUM0 1156 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
USP6NL-206ENST00000609853 GGA1Q9UJY5 639 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms