RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 M0R2C6 588 aa16.58■□□□□ 0.24
SNRPA-208ENST00000600456 HIP1O00291 1037 aa16.58■□□□□ 0.24
SNRPA-208ENST00000600456 SPRYD7Q5W111 196 aa16.58■□□□□ 0.24
SNRPA-208ENST00000600456 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
SNRPA-208ENST00000600456 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
SNRPA-208ENST00000600456 ZKSCAN4Q969J2 545 aaPredicted RBP16.58■□□□□ 0.24
SNRPA-208ENST00000600456 MCM9Q9NXL9 1143 aa16.58■□□□□ 0.24
SNRPA-208ENST00000600456 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
SNRPA-208ENST00000600456 DDX60LQ5H9U9 1706 aaKnown RBP16.57■□□□□ 0.24
SNRPA-208ENST00000600456 SPDYE5A6NIY4 337 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 PRKAB2O43741 272 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 CTNND1O60716 968 aaKnown RBP16.57■□□□□ 0.24
SNRPA-208ENST00000600456 AOC2O75106 756 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 POLR3DP05423 398 aaPredicted RBP16.57■□□□□ 0.24
SNRPA-208ENST00000600456 GSPT1P15170 499 aaKnown RBP16.57■□□□□ 0.24
SNRPA-208ENST00000600456 SDSP20132 328 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 INPP5BP32019 993 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 MAP2K1Q02750 393 aaPredicted RBP16.57■□□□□ 0.24
SNRPA-208ENST00000600456 ERO1BQ86YB8 467 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 AMOTL1Q8IY63 956 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 ELP3Q9H9T3 547 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 SERPINB13Q9UIV8 391 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 OTOFQ9HC10 1997 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 AK9Q5TCS8 1911 aa16.57■□□□□ 0.24
SNRPA-208ENST00000600456 KIF23Q02241 960 aaPredicted RBP16.56■□□□□ 0.24
SNRPA-208ENST00000600456 SCYL3Q8IZE3 742 aa16.56■□□□□ 0.24
SNRPA-208ENST00000600456 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
SNRPA-208ENST00000600456 FAM196BA6NMK8 535 aa16.55■□□□□ 0.24
SNRPA-208ENST00000600456 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
SNRPA-208ENST00000600456 PATL2C9JE40 543 aaKnown RBP16.55■□□□□ 0.24
SNRPA-208ENST00000600456 MCMDC2Q4G0Z9 681 aa16.55■□□□□ 0.24
SNRPA-208ENST00000600456 SEC62Q99442 399 aaKnown RBP16.55■□□□□ 0.24
SNRPA-208ENST00000600456 NACAP1Q9BZK3 213 aa16.55■□□□□ 0.24
SNRPA-208ENST00000600456 PICK1Q9NRD5 415 aa16.55■□□□□ 0.24
SNRPA-208ENST00000600456 DIAPH3Q9NSV4 1193 aa16.55■□□□□ 0.24
SNRPA-208ENST00000600456 GINM1Q9NU53 330 aa16.55■□□□□ 0.24
SNRPA-208ENST00000600456 ARPP21Q9UBL0 812 aaPredicted RBP16.55■□□□□ 0.24
SNRPA-208ENST00000600456 NAV1Q8NEY1 1877 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 MANSC4A6NHS7 340 aaPredicted RBP16.54■□□□□ 0.24
SNRPA-208ENST00000600456 CAP2P40123 477 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 PLCD1P51178 756 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 MFAP1P55081 439 aaKnown RBP16.54■□□□□ 0.24
SNRPA-208ENST00000600456 INHBEP58166 350 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 PPATQ06203 517 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 SREBF2Q12772 1141 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
SNRPA-208ENST00000600456 SBK1Q52WX2 424 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 FAM227BQ96M60 508 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 DNAJC18Q9H819 358 aa16.54■□□□□ 0.24
SNRPA-208ENST00000600456 MYH1P12882 1939 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 USP17L21D6R901 530 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 APPP05067 770 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 SLURP2P0DP57 97 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 GABPAQ06546 454 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 PPIL2Q13356 520 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 C12orf60Q5U649 245 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 CTR9Q6PD62 1173 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 ZIC5Q96T25 663 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 WBP1LQ9NX94 342 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
SNRPA-208ENST00000600456 SWAP70Q9UH65 585 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
SNRPA-208ENST00000600456 CA12O43570 354 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 PTPRAP18433 802 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 GJA5P36382 358 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 TM4SF4P48230 202 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 TDO2P48775 406 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 MKRN3Q13064 507 aaKnown RBP16.52■□□□□ 0.24
SNRPA-208ENST00000600456 IFNL3Q8IZI9 196 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 BEGAINQ9BUH8 593 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 TBC1D2Q9BYX2 928 aa16.52■□□□□ 0.24
SNRPA-208ENST00000600456 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.24
SNRPA-208ENST00000600456 CCDC171Q6TFL3 1326 aa16.51■□□□□ 0.23
SNRPA-208ENST00000600456 ASNSP08243 561 aa16.51■□□□□ 0.23
SNRPA-208ENST00000600456 CYP2D6P10635 497 aa16.51■□□□□ 0.23
SNRPA-208ENST00000600456 GTF2A2P52657 109 aa16.51■□□□□ 0.23
SNRPA-208ENST00000600456 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
SNRPA-208ENST00000600456 CCDC129Q6ZRS4 1044 aa16.51■□□□□ 0.23
SNRPA-208ENST00000600456 NAPBQ9H115 298 aa16.51■□□□□ 0.23
SNRPA-208ENST00000600456 TESPA1A2RU30 521 aaPredicted RBP16.5■□□□□ 0.23
SNRPA-208ENST00000600456 CXCL11O14625 94 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 IRF6O14896 467 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 SHMT1P34896 483 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 SNAPC2Q13487 334 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
SNRPA-208ENST00000600456 CWC27Q6UX04 472 aaKnown RBP16.5■□□□□ 0.23
SNRPA-208ENST00000600456 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 SAGE1Q9NXZ1 904 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 KCNH4Q9UQ05 1017 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 ZHX2Q9Y6X8 837 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 ROBO3Q96MS0 1386 aa16.5■□□□□ 0.23
SNRPA-208ENST00000600456 RAD50Q92878 1312 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms