RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 MAP3K12Q12852 859 aa21.85■■□□□ 1.09
CHMP2A-203ENST00000597209 TTF1Q15361 905 aaPredicted RBP21.85■■□□□ 1.09
CHMP2A-203ENST00000597209 TGFBRAP1Q8WUH2 860 aa21.85■■□□□ 1.09
CHMP2A-203ENST00000597209 TBC1D2Q9BYX2 928 aa21.85■■□□□ 1.09
CHMP2A-203ENST00000597209 SLC45A1Q9Y2W3 748 aa21.85■■□□□ 1.09
CHMP2A-203ENST00000597209 FLT1P17948 1338 aa21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 ADGRA2Q96PE1 1338 aa21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 CDK5RAP2Q96SN8 1893 aa21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 GNRH1P01148 92 aa21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 CAP2P40123 477 aa21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 LACTBP83111 547 aaPredicted RBP21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 KIF22Q14807 665 aa21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 METTL16Q86W50 562 aaKnown RBP21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 FOXP4Q8IVH2 680 aaPredicted RBP21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 ANTXR1Q9H6X2 564 aa21.84■■□□□ 1.09
CHMP2A-203ENST00000597209 FAM196BA6NMK8 535 aa21.83■■□□□ 1.09
CHMP2A-203ENST00000597209 IFIT2P09913 472 aaKnown RBP21.83■■□□□ 1.09
CHMP2A-203ENST00000597209 MAPKAPK5Q8IW41 473 aa21.83■■□□□ 1.09
CHMP2A-203ENST00000597209 MAGEB6Q8N7X4 407 aa21.83■■□□□ 1.09
CHMP2A-203ENST00000597209 PARK7Q99497 189 aaKnown RBP21.83■■□□□ 1.09
CHMP2A-203ENST00000597209 NDUFB9Q9Y6M9 179 aa21.83■■□□□ 1.09
CHMP2A-203ENST00000597209 DYNLL1P63167 89 aaKnown RBP21.82■■□□□ 1.08
CHMP2A-203ENST00000597209 ARMC5Q96C12 935 aa21.82■■□□□ 1.08
CHMP2A-203ENST00000597209 SIPA1L1O43166 1804 aa21.82■■□□□ 1.08
CHMP2A-203ENST00000597209 PTPRFP10586 1907 aa21.82■■□□□ 1.08
CHMP2A-203ENST00000597209 APBB1O00213 710 aa21.81■■□□□ 1.08
CHMP2A-203ENST00000597209 PRMT2P55345 433 aa21.81■■□□□ 1.08
CHMP2A-203ENST00000597209 RRP1BQ14684 758 aaKnown RBP21.81■■□□□ 1.08
CHMP2A-203ENST00000597209 CPA4Q9UI42 421 aa21.81■■□□□ 1.08
CHMP2A-203ENST00000597209 GADL1Q6ZQY3 521 aa21.8■■□□□ 1.08
CHMP2A-203ENST00000597209 GINM1Q9NU53 330 aa21.8■■□□□ 1.08
CHMP2A-203ENST00000597209 ATAD5Q96QE3 1844 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 TRIM75PA6NK02 468 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 USP17L5A8MUK1 530 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 HLA-DOAP06340 250 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 BCRP11274 1271 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 MIGA1Q8NAN2 632 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 PROCA1Q8NCQ7 364 aaPredicted RBP21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 ZNF280CQ8ND82 737 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 ARHGAP39Q9C0H5 1083 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 PALD1Q9ULE6 856 aa21.79■■□□□ 1.08
CHMP2A-203ENST00000597209 CCDC84Q86UT8 332 aaPredicted RBP21.78■■□□□ 1.08
CHMP2A-203ENST00000597209 RIOK1Q9BRS2 568 aaKnown RBP21.78■■□□□ 1.08
CHMP2A-203ENST00000597209 DNAJC18Q9H819 358 aa21.78■■□□□ 1.08
CHMP2A-203ENST00000597209 AS3MTQ9HBK9 375 aa21.78■■□□□ 1.08
CHMP2A-203ENST00000597209 AGTPBP1Q9UPW5 1226 aa21.78■■□□□ 1.08
CHMP2A-203ENST00000597209 PTCH2Q9Y6C5 1203 aa21.78■■□□□ 1.08
CHMP2A-203ENST00000597209 ASNSP08243 561 aa21.77■■□□□ 1.08
CHMP2A-203ENST00000597209 CYP2C8P10632 490 aa21.77■■□□□ 1.08
CHMP2A-203ENST00000597209 ATP5JP18859 108 aa21.77■■□□□ 1.08
CHMP2A-203ENST00000597209 SPP2Q13103 211 aa21.77■■□□□ 1.08
CHMP2A-203ENST00000597209 SH3D19Q5HYK7 790 aa21.77■■□□□ 1.08
CHMP2A-203ENST00000597209 CRACR2BQ8N4Y2 399 aaPredicted RBP21.77■■□□□ 1.08
CHMP2A-203ENST00000597209 WDR18Q9BV38 432 aa21.77■■□□□ 1.08
CHMP2A-203ENST00000597209 LRRCC1Q9C099 1032 aa21.77■■□□□ 1.08
CHMP2A-203ENST00000597209 PDE6AP16499 860 aa21.76■■□□□ 1.07
CHMP2A-203ENST00000597209 PSMC4P43686 418 aa21.76■■□□□ 1.07
CHMP2A-203ENST00000597209 USP5P45974 858 aa21.76■■□□□ 1.07
CHMP2A-203ENST00000597209 SLC9C2Q5TAH2 1124 aa21.76■■□□□ 1.07
CHMP2A-203ENST00000597209 NBPF11Q86T75 865 aa21.76■■□□□ 1.07
CHMP2A-203ENST00000597209 DNAJC2Q99543 621 aaKnown RBP21.76■■□□□ 1.07
CHMP2A-203ENST00000597209 TRIM34Q9BYJ4 488 aa21.76■■□□□ 1.07
CHMP2A-203ENST00000597209 SAP30BPQ9UHR5 308 aaKnown RBP21.76■■□□□ 1.07
CHMP2A-203ENST00000597209 MYH1P12882 1939 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 LOC285556D6RIA3 1793 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 GOLIM4O00461 696 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 HOXD10P28358 340 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 CTGFP29279 349 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 ZNF333Q96JL9 665 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 TRIM47Q96LD4 638 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 EHD4Q9H223 541 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 ZSWIM8A7E2V4 1837 aa21.75■■□□□ 1.07
CHMP2A-203ENST00000597209 RBBP6Q7Z6E9 1792 aaKnown RBP21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 MAGEB6P1A0A0J9YX57 407 aa21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 SLC9C1Q4G0N8 1177 aa21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 TTC6Q86TZ1 520 aa21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 HAUS7Q99871 368 aa21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 DCTPP1Q9H773 170 aa21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 PAG1Q9NWQ8 432 aa21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 SRRDQ9UH36 339 aa21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 PNMA3Q9UL41 463 aa21.74■■□□□ 1.07
CHMP2A-203ENST00000597209 TCRBV5S4A2TA0A5A2 114 aa21.73■■□□□ 1.07
CHMP2A-203ENST00000597209 PABPC4Q13310 644 aaKnown RBP eCLIP21.73■■□□□ 1.07
CHMP2A-203ENST00000597209 TREML2Q5T2D2 321 aa21.73■■□□□ 1.07
CHMP2A-203ENST00000597209 TATDN1Q6P1N9 297 aa21.73■■□□□ 1.07
CHMP2A-203ENST00000597209 BOLA2Q9H3K6 86 aa21.73■■□□□ 1.07
CHMP2A-203ENST00000597209 ZNF532Q9HCE3 1301 aa21.73■■□□□ 1.07
CHMP2A-203ENST00000597209 FMNL1O95466 1100 aaPredicted RBP21.72■■□□□ 1.07
CHMP2A-203ENST00000597209 OSBPP22059 807 aa21.72■■□□□ 1.07
CHMP2A-203ENST00000597209 HMGCS2P54868 508 aa21.72■■□□□ 1.07
CHMP2A-203ENST00000597209 FCGRTP55899 365 aa21.72■■□□□ 1.07
CHMP2A-203ENST00000597209 JAG1P78504 1218 aa21.72■■□□□ 1.07
CHMP2A-203ENST00000597209 CRNKL1Q9BZJ0 848 aaKnown RBP21.72■■□□□ 1.07
CHMP2A-203ENST00000597209 SERPINB13Q9UIV8 391 aa21.72■■□□□ 1.07
CHMP2A-203ENST00000597209 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
CHMP2A-203ENST00000597209 HTTP42858 3142 aa21.71■■□□□ 1.07
CHMP2A-203ENST00000597209 C19orf81C9J6K1 198 aa21.71■■□□□ 1.07
CHMP2A-203ENST00000597209 BACE1P56817 501 aa21.71■■□□□ 1.07
CHMP2A-203ENST00000597209 SMCR8Q8TEV9 937 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms