RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 TNNI3KQ59H18 835 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 SLAIN1Q8ND83 568 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 NKX2-3Q8TAU0 364 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 SH3RF3Q8TEJ3 882 aaPredicted RBP18.28■□□□□ 0.52
XRCC1-205ENST00000595789 DBNDD2Q9BQY9 259 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 LRP2BPQ9P2M1 347 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 COLQQ9Y215 455 aaPredicted RBP18.28■□□□□ 0.52
XRCC1-205ENST00000595789 FPGT-TNNI3KV9GXZ4 949 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 DOCK1Q14185 1865 aa18.28■□□□□ 0.52
XRCC1-205ENST00000595789 PPP4CP60510 307 aa18.27■□□□□ 0.52
XRCC1-205ENST00000595789 PROCA1Q8NCQ7 364 aaPredicted RBP18.27■□□□□ 0.52
XRCC1-205ENST00000595789 RNF208Q9H0X6 261 aa18.27■□□□□ 0.52
XRCC1-205ENST00000595789 ADCY3O60266 1144 aa18.26■□□□□ 0.51
XRCC1-205ENST00000595789 CYP2E1P05181 493 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-205ENST00000595789 FXR1P51114 621 aaKnown RBP eCLIP18.26■□□□□ 0.51
XRCC1-205ENST00000595789 UBXN2AP68543 259 aa18.26■□□□□ 0.51
XRCC1-205ENST00000595789 IRF5Q13568 498 aa18.26■□□□□ 0.51
XRCC1-205ENST00000595789 ADGRA1Q86SQ6 560 aa18.26■□□□□ 0.51
XRCC1-205ENST00000595789 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
XRCC1-205ENST00000595789 PXYLP1Q8TE99 480 aa18.26■□□□□ 0.51
XRCC1-205ENST00000595789 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-205ENST00000595789 ZNF512BQ96KM6 892 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-205ENST00000595789 UNC93B1Q9H1C4 597 aa18.26■□□□□ 0.51
XRCC1-205ENST00000595789 BIN2Q9UBW5 565 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-205ENST00000595789 HERC5Q9UII4 1024 aaKnown RBP18.26■□□□□ 0.51
XRCC1-205ENST00000595789 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
XRCC1-205ENST00000595789 TNPO2O14787 897 aaKnown RBP18.25■□□□□ 0.51
XRCC1-205ENST00000595789 ELNP15502 786 aa18.25■□□□□ 0.51
XRCC1-205ENST00000595789 SH3D19Q5HYK7 790 aa18.25■□□□□ 0.51
XRCC1-205ENST00000595789 NAA16Q6N069 864 aaPredicted RBP18.25■□□□□ 0.51
XRCC1-205ENST00000595789 METTL16Q86W50 562 aaKnown RBP18.25■□□□□ 0.51
XRCC1-205ENST00000595789 ANKRD13CQ8N6S4 541 aa18.25■□□□□ 0.51
XRCC1-205ENST00000595789 U2AF1L4Q8WU68 220 aaKnown RBP18.25■□□□□ 0.51
XRCC1-205ENST00000595789 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
XRCC1-205ENST00000595789 PI4KBQ9UBF8 816 aa18.25■□□□□ 0.51
XRCC1-205ENST00000595789 MGAMO43451 1857 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 DOCK3Q8IZD9 2030 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 USP17L5A8MUK1 530 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 ZBTB7BO15156 539 aaPredicted RBP18.24■□□□□ 0.51
XRCC1-205ENST00000595789 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
XRCC1-205ENST00000595789 HMGCS2P54868 508 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 JAG1P78504 1218 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 FAM110CQ1W6H9 321 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 CCDC158Q5M9N0 1113 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 TTC39AQ5SRH9 613 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 TBC1D2Q9BYX2 928 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 DHX36Q9H2U1 1008 aaKnown RBP18.24■□□□□ 0.51
XRCC1-205ENST00000595789 C1orf115Q9H7X2 142 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 DNAJC18Q9H819 358 aa18.24■□□□□ 0.51
XRCC1-205ENST00000595789 SGPL1O95470 568 aa18.23■□□□□ 0.51
XRCC1-205ENST00000595789 BAG3O95817 575 aa18.23■□□□□ 0.51
XRCC1-205ENST00000595789 RLBP1P12271 317 aa18.23■□□□□ 0.51
XRCC1-205ENST00000595789 WDR18Q9BV38 432 aa18.23■□□□□ 0.51
XRCC1-205ENST00000595789 DBNLQ9UJU6 430 aaKnown RBP18.23■□□□□ 0.51
XRCC1-205ENST00000595789 PNMA3Q9UL41 463 aa18.23■□□□□ 0.51
XRCC1-205ENST00000595789 SZT2Q5T011 3432 aa18.22■□□□□ 0.51
XRCC1-205ENST00000595789 IGSF3O75054 1194 aa18.22■□□□□ 0.51
XRCC1-205ENST00000595789 INHAP05111 366 aa18.22■□□□□ 0.51
XRCC1-205ENST00000595789 PLCG2P16885 1265 aa18.22■□□□□ 0.51
XRCC1-205ENST00000595789 ZAP70P43403 619 aa18.22■□□□□ 0.51
XRCC1-205ENST00000595789 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
XRCC1-205ENST00000595789 FOXP4Q8IVH2 680 aaPredicted RBP18.22■□□□□ 0.51
XRCC1-205ENST00000595789 MAPKAPK5Q8IW41 473 aa18.22■□□□□ 0.51
XRCC1-205ENST00000595789 TGFBRAP1Q8WUH2 860 aa18.22■□□□□ 0.51
XRCC1-205ENST00000595789 ASCC2Q9H1I8 757 aaPredicted RBP18.22■□□□□ 0.51
XRCC1-205ENST00000595789 PIH1D3Q9NQM4 214 aaKnown RBP18.22■□□□□ 0.51
XRCC1-205ENST00000595789 GJD2Q9UKL4 321 aa18.22■□□□□ 0.51
XRCC1-205ENST00000595789 OS9Q13438 667 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-205ENST00000595789 DPF3Q92784 378 aa18.21■□□□□ 0.51
XRCC1-205ENST00000595789 COA7Q96BR5 231 aa18.21■□□□□ 0.51
XRCC1-205ENST00000595789 EAF2Q96CJ1 260 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-205ENST00000595789 NOL10Q9BSC4 688 aaKnown RBP18.21■□□□□ 0.51
XRCC1-205ENST00000595789 PAK6Q9NQU5 681 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-205ENST00000595789 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
XRCC1-205ENST00000595789 SIPA1L1O43166 1804 aa18.21■□□□□ 0.51
XRCC1-205ENST00000595789 FLT1P17948 1338 aa18.21■□□□□ 0.51
XRCC1-205ENST00000595789 BACE1P56817 501 aa18.2■□□□□ 0.5
XRCC1-205ENST00000595789 PABPC4Q13310 644 aaKnown RBP eCLIP18.2■□□□□ 0.5
XRCC1-205ENST00000595789 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
XRCC1-205ENST00000595789 AS3MTQ9HBK9 375 aa18.2■□□□□ 0.5
XRCC1-205ENST00000595789 PALD1Q9ULE6 856 aa18.2■□□□□ 0.5
XRCC1-205ENST00000595789 LOC285556D6RIA3 1793 aa18.19■□□□□ 0.5
XRCC1-205ENST00000595789 FARP2O94887 1054 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-205ENST00000595789 ASNSP08243 561 aa18.19■□□□□ 0.5
XRCC1-205ENST00000595789 HOXA7P31268 230 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-205ENST00000595789 DYNLL1P63167 89 aaKnown RBP18.19■□□□□ 0.5
XRCC1-205ENST00000595789 DEFB118Q96PH6 123 aa18.19■□□□□ 0.5
XRCC1-205ENST00000595789 HTATIP2Q9BUP3 242 aa18.19■□□□□ 0.5
XRCC1-205ENST00000595789 CRISPLD2Q9H0B8 497 aa18.19■□□□□ 0.5
XRCC1-205ENST00000595789 CCDC8Q9H0W5 538 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-205ENST00000595789 MORF4L1Q9UBU8 362 aa18.19■□□□□ 0.5
XRCC1-205ENST00000595789 CAPN2P17655 700 aa18.18■□□□□ 0.5
XRCC1-205ENST00000595789 MTMR2Q13614 643 aa18.18■□□□□ 0.5
XRCC1-205ENST00000595789 CHRDL2Q6WN34 429 aa18.18■□□□□ 0.5
XRCC1-205ENST00000595789 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
XRCC1-205ENST00000595789 P2RX7Q99572 595 aaKnown RBP18.18■□□□□ 0.5
XRCC1-205ENST00000595789 PRO3102Q9H379 93 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms