RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MCAMP43121 646 aa21.55■■□□□ 1.04
SHKBP1-203ENST00000594298 IRF5Q13568 498 aa21.55■■□□□ 1.04
SHKBP1-203ENST00000594298 PROCA1Q8NCQ7 364 aaPredicted RBP21.55■■□□□ 1.04
SHKBP1-203ENST00000594298 PXYLP1Q8TE99 480 aa21.55■■□□□ 1.04
SHKBP1-203ENST00000594298 RAI14Q9P0K7 980 aa21.55■■□□□ 1.04
SHKBP1-203ENST00000594298 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.55■■□□□ 1.04
SHKBP1-203ENST00000594298 BIN2Q9UBW5 565 aaPredicted RBP21.55■■□□□ 1.04
SHKBP1-203ENST00000594298 PNMA3Q9UL41 463 aa21.55■■□□□ 1.04
SHKBP1-203ENST00000594298 TNPO2O14787 897 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-203ENST00000594298 FLT3LGP49771 235 aa21.54■■□□□ 1.04
SHKBP1-203ENST00000594298 CCDC84Q86UT8 332 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-203ENST00000594298 PHIPQ8WWQ0 1821 aa21.53■■□□□ 1.04
SHKBP1-203ENST00000594298 FAM196BA6NMK8 535 aa21.53■■□□□ 1.04
SHKBP1-203ENST00000594298 ADCY3O60266 1144 aa21.53■■□□□ 1.04
SHKBP1-203ENST00000594298 CAPN2P17655 700 aa21.53■■□□□ 1.04
SHKBP1-203ENST00000594298 TREML2Q5T2D2 321 aa21.53■■□□□ 1.04
SHKBP1-203ENST00000594298 CHMP4BQ9H444 224 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-203ENST00000594298 GPR108Q9NPR9 543 aa21.53■■□□□ 1.04
SHKBP1-203ENST00000594298 HERC5Q9UII4 1024 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-203ENST00000594298 ZBTB7BO15156 539 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 RLBP1P12271 317 aa21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 CAP2P40123 477 aa21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 FAM110CQ1W6H9 321 aa21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 TEX11Q8IYF3 940 aa21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 ANKRD13CQ8N6S4 541 aa21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 ZNF280CQ8ND82 737 aa21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 U2AF1L4Q8WU68 220 aaKnown RBP21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 UNC93B1Q9H1C4 597 aa21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 LRP2BPQ9P2M1 347 aa21.52■■□□□ 1.04
SHKBP1-203ENST00000594298 IGSF3O75054 1194 aa21.51■■□□□ 1.03
SHKBP1-203ENST00000594298 SGPL1O95470 568 aa21.51■■□□□ 1.03
SHKBP1-203ENST00000594298 SPP2Q13103 211 aa21.51■■□□□ 1.03
SHKBP1-203ENST00000594298 POLA2Q14181 598 aa21.51■■□□□ 1.03
SHKBP1-203ENST00000594298 PANK1Q8TE04 598 aa21.51■■□□□ 1.03
SHKBP1-203ENST00000594298 DPF3Q92784 378 aa21.51■■□□□ 1.03
SHKBP1-203ENST00000594298 HTATIP2Q9BUP3 242 aa21.51■■□□□ 1.03
SHKBP1-203ENST00000594298 PTPRFP10586 1907 aa21.51■■□□□ 1.03
SHKBP1-203ENST00000594298 INHAP05111 366 aa21.5■■□□□ 1.03
SHKBP1-203ENST00000594298 GCLCP48506 637 aaPredicted RBP21.5■■□□□ 1.03
SHKBP1-203ENST00000594298 SH3D19Q5HYK7 790 aa21.5■■□□□ 1.03
SHKBP1-203ENST00000594298 SH3RF3Q8TEJ3 882 aaPredicted RBP21.5■■□□□ 1.03
SHKBP1-203ENST00000594298 COA7Q96BR5 231 aa21.5■■□□□ 1.03
SHKBP1-203ENST00000594298 NOL10Q9BSC4 688 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-203ENST00000594298 DHX36Q9H2U1 1008 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-203ENST00000594298 PI4KBQ9UBF8 816 aa21.5■■□□□ 1.03
SHKBP1-203ENST00000594298 MGAMO43451 1857 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 USP17L5A8MUK1 530 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 BAG3O95817 575 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 ELNP15502 786 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 PLCG2P16885 1265 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 PPP4CP60510 307 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 PABPC4Q13310 644 aaKnown RBP eCLIP21.49■■□□□ 1.031e-9■■■■□ 22.8
SHKBP1-203ENST00000594298 PDE3AQ14432 1141 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 RRP1BQ14684 758 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 TNNI3KQ59H18 835 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 NAA16Q6N069 864 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 SSH3Q8TE77 659 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 ZNF512BQ96KM6 892 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 DDX19BQ9UMR2 479 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 FPGT-TNNI3KV9GXZ4 949 aa21.49■■□□□ 1.03
SHKBP1-203ENST00000594298 FARP2O94887 1054 aaPredicted RBP21.48■■□□□ 1.03
SHKBP1-203ENST00000594298 HMGCS2P54868 508 aa21.48■■□□□ 1.03
SHKBP1-203ENST00000594298 CCDC158Q5M9N0 1113 aa21.48■■□□□ 1.03
SHKBP1-203ENST00000594298 TTC39AQ5SRH9 613 aa21.48■■□□□ 1.03
SHKBP1-203ENST00000594298 METTL16Q86W50 562 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-203ENST00000594298 AS3MTQ9HBK9 375 aa21.48■■□□□ 1.03
SHKBP1-203ENST00000594298 PAK6Q9NQU5 681 aaPredicted RBP21.48■■□□□ 1.03
SHKBP1-203ENST00000594298 ATP8B2P98198 1209 aa21.47■■□□□ 1.03
SHKBP1-203ENST00000594298 CHRDL2Q6WN34 429 aa21.47■■□□□ 1.03
SHKBP1-203ENST00000594298 DBNDD2Q9BQY9 259 aa21.47■■□□□ 1.03
SHKBP1-203ENST00000594298 WDR18Q9BV38 432 aa21.47■■□□□ 1.03
SHKBP1-203ENST00000594298 AATFQ9NY61 560 aaKnown RBP eCLIP21.47■■□□□ 1.03
SHKBP1-203ENST00000594298 LOC285556D6RIA3 1793 aa21.46■■□□□ 1.03
SHKBP1-203ENST00000594298 CYP2E1P05181 493 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-203ENST00000594298 ASCC2Q9H1I8 757 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-203ENST00000594298 SNRKQ9NRH2 765 aa21.46■■□□□ 1.03
SHKBP1-203ENST00000594298 ASNSP08243 561 aa21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 ADGRA1Q86SQ6 560 aa21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 FOXP4Q8IVH2 680 aaPredicted RBP21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 TGFBRAP1Q8WUH2 860 aa21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 CRISPLD2Q9H0B8 497 aa21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 GINM1Q9NU53 330 aa21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 COG6Q9Y2V7 657 aa21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 NR2E3Q9Y5X4 410 aa21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 FLT1P17948 1338 aa21.45■■□□□ 1.02
SHKBP1-203ENST00000594298 SURF6O75683 361 aaKnown RBP21.44■■□□□ 1.02
SHKBP1-203ENST00000594298 BACE1P56817 501 aa21.44■■□□□ 1.02
SHKBP1-203ENST00000594298 OS9Q13438 667 aaPredicted RBP21.44■■□□□ 1.02
SHKBP1-203ENST00000594298 DEFB118Q96PH6 123 aa21.44■■□□□ 1.02
SHKBP1-203ENST00000594298 PRO3102Q9H379 93 aa21.44■■□□□ 1.02
SHKBP1-203ENST00000594298 DNAJC18Q9H819 358 aa21.44■■□□□ 1.02
SHKBP1-203ENST00000594298 RBM27Q9P2N5 1060 aaKnown RBP21.44■■□□□ 1.02
SHKBP1-203ENST00000594298 MORF4L1Q9UBU8 362 aa21.44■■□□□ 1.02
SHKBP1-203ENST00000594298 MAST2Q6P0Q8 1798 aa21.43■■□□□ 1.02
SHKBP1-203ENST00000594298 TFRCP02786 760 aaKnown RBP21.43■■□□□ 1.02
SHKBP1-203ENST00000594298 HOXA7P31268 230 aaPredicted RBP21.43■■□□□ 1.02
SHKBP1-203ENST00000594298 MTMR2Q13614 643 aa21.43■■□□□ 1.02
SHKBP1-203ENST00000594298 MAPKAPK5Q8IW41 473 aa21.43■■□□□ 1.02
SHKBP1-203ENST00000594298 GJD2Q9UKL4 321 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms