RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 GOLGA2P5Q9HBQ8 144 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 PRDM6Q9NQX0 595 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 SNRKQ9NRH2 765 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 C21orf2O43822 256 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 NID1P14543 1247 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 IL6STP40189 918 aaPredicted RBP7.43□□□□□ -1.22
DNMT1-220ENST00000589351 PRELPP51888 382 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 EIF5P55010 431 aaKnown RBP7.43□□□□□ -1.22
DNMT1-220ENST00000589351 MTFR1Q15390 333 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 MTHFSDQ2M296 383 aaKnown RBP7.43□□□□□ -1.22
DNMT1-220ENST00000589351 ZNF790Q6PG37 636 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 GAS2L2Q8NHY3 880 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 FMNL2Q96PY5 1086 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 TJP1Q07157 1748 aa7.43□□□□□ -1.22
DNMT1-220ENST00000589351 A6NJY4 79 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 TMEM229AB2RXF0 380 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 U2SURPO15042 1029 aaKnown RBP7.42□□□□□ -1.22
DNMT1-220ENST00000589351 HSPA1AP0DMV8 641 aaKnown RBP7.42□□□□□ -1.22
DNMT1-220ENST00000589351 HSPA1BP0DMV9 641 aaKnown RBP7.42□□□□□ -1.22
DNMT1-220ENST00000589351 ADGRE1Q14246 886 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 CNBD1Q8NA66 436 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 RGS22Q8NE09 1264 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 SLC30A3Q99726 388 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 TAOK3Q9H2K8 898 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 TBC1D2BQ9UPU7 963 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 ZNF652Q9Y2D9 606 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 CARMIL3Q8ND23 1372 aa7.42□□□□□ -1.22
DNMT1-220ENST00000589351 AFDNP55196 1824 aaKnown RBP7.41□□□□□ -1.22
DNMT1-220ENST00000589351 C9orf172C9J069 976 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 NFKBIEO00221 500 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 TXLNAP40222 546 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 MBTPS1Q14703 1052 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 TBC1D9BQ66K14 1250 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 STYK1Q6J9G0 422 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 PRR5LQ6MZQ0 368 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 CCER1Q8TC90 406 aaPredicted RBP7.41□□□□□ -1.22
DNMT1-220ENST00000589351 TNFRSF25Q93038 417 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 MASTLQ96GX5 879 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 ZNF496Q96IT1 587 aaPredicted RBP7.41□□□□□ -1.22
DNMT1-220ENST00000589351 LTBP3Q9NS15 1303 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 HEG1Q9ULI3 1381 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 CCDC88AQ3V6T2 1871 aa7.41□□□□□ -1.22
DNMT1-220ENST00000589351 SELPP16109 830 aa7.4□□□□□ -1.22
DNMT1-220ENST00000589351 ALDH1B1P30837 517 aa7.4□□□□□ -1.22
DNMT1-220ENST00000589351 SFSWAPQ12872 951 aaKnown RBP7.4□□□□□ -1.22
DNMT1-220ENST00000589351 CC2D1BQ5T0F9 858 aaKnown RBP7.4□□□□□ -1.22
DNMT1-220ENST00000589351 CLEC4GQ6UXB4 293 aa7.4□□□□□ -1.22
DNMT1-220ENST00000589351 TPTE2Q6XPS3 522 aa7.4□□□□□ -1.22
DNMT1-220ENST00000589351 LRRC69Q6ZNQ3 347 aa7.4□□□□□ -1.22
DNMT1-220ENST00000589351 RTF1Q92541 710 aaKnown RBP7.4□□□□□ -1.22
DNMT1-220ENST00000589351 CFAP53Q96M91 514 aa7.4□□□□□ -1.22
DNMT1-220ENST00000589351 NUDCQ9Y266 331 aa7.4□□□□□ -1.22
DNMT1-220ENST00000589351 NRXN2Q9P2S2 1712 aa7.4□□□□□ -1.23
DNMT1-220ENST00000589351 ADAMTS7Q9UKP4 1686 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 MRC1P22897 1456 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 APBB1O00213 710 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 DDNO94850 711 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-220ENST00000589351 SRGNP10124 158 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 CCDC93Q567U6 631 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 PRPF40BQ6NWY9 871 aaKnown RBP7.39□□□□□ -1.23
DNMT1-220ENST00000589351 C20orf204Q6ZNR8 217 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 LDHDQ86WU2 507 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 NBPF5PQ86XG9 351 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-220ENST00000589351 RTKN2Q8IZC4 609 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 IL27Q8NEV9 243 aa7.39□□□□□ -1.23
DNMT1-220ENST00000589351 DLEC1Q9Y238 1755 aa7.38□□□□□ -1.23
DNMT1-220ENST00000589351 A1BGP04217 495 aa7.38□□□□□ -1.23
DNMT1-220ENST00000589351 NEFMP07197 916 aa7.38□□□□□ -1.23
DNMT1-220ENST00000589351 SNRPA1P09661 255 aaKnown RBP7.38□□□□□ -1.23
DNMT1-220ENST00000589351 NPR1P16066 1061 aa7.38□□□□□ -1.23
DNMT1-220ENST00000589351 ADH7P40394 386 aa7.38□□□□□ -1.23
DNMT1-220ENST00000589351 PNMA8AQ86V59 439 aaPredicted RBP7.38□□□□□ -1.23
DNMT1-220ENST00000589351 TXNRD3Q86VQ6 643 aa7.38□□□□□ -1.23
DNMT1-220ENST00000589351 IL17REQ8NFR9 667 aa7.38□□□□□ -1.23
DNMT1-220ENST00000589351 ZDHHC1Q8WTX9 485 aa7.38□□□□□ -1.23
DNMT1-220ENST00000589351 MKRN1Q9UHC7 482 aaKnown RBP7.38□□□□□ -1.23
DNMT1-220ENST00000589351 VIRMAQ69YN4 1812 aaKnown RBP7.38□□□□□ -1.23
DNMT1-220ENST00000589351 DICER1Q9UPY3 1922 aaKnown RBP7.37□□□□□ -1.23
DNMT1-220ENST00000589351 KIF7Q2M1P5 1343 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 TMEM88BA6NKF7 163 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 CAMTA2O94983 1202 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 CTCFP49711 727 aaPredicted RBP7.37□□□□□ -1.23
DNMT1-220ENST00000589351 FKBP4Q02790 459 aaKnown RBP eCLIP7.37□□□□□ -1.23
DNMT1-220ENST00000589351 CNGB1Q14028 1251 aaPredicted RBP7.37□□□□□ -1.23
DNMT1-220ENST00000589351 EAPPQ56P03 285 aaPredicted RBP7.37□□□□□ -1.23
DNMT1-220ENST00000589351 SHISA2Q6UWI4 295 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 RAB44Q7Z6P3 723 aaPredicted RBP7.37□□□□□ -1.23
DNMT1-220ENST00000589351 JDP2Q8WYK2 163 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 TP53INP1Q96A56 240 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 TMX4Q9H1E5 349 aaPredicted RBP7.37□□□□□ -1.23
DNMT1-220ENST00000589351 PRDM10Q9NQV6 1147 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 HACL1Q9UJ83 578 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 TIAM2Q8IVF5 1701 aa7.37□□□□□ -1.23
DNMT1-220ENST00000589351 HTATSF1O43719 755 aaKnown RBP7.36□□□□□ -1.23
DNMT1-220ENST00000589351 RAD21O60216 631 aa7.36□□□□□ -1.23
DNMT1-220ENST00000589351 EIF6P56537 245 aaKnown RBP7.36□□□□□ -1.23
DNMT1-220ENST00000589351 IRF5Q13568 498 aa7.36□□□□□ -1.23
DNMT1-220ENST00000589351 DEFB115Q30KQ5 88 aa7.36□□□□□ -1.23
DNMT1-220ENST00000589351 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms