RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 PTPRFP10586 1907 aa20.64■□□□□ 0.89
SEC11C-205ENST00000588875 MYH2Q9UKX2 1941 aa20.63■□□□□ 0.89
SEC11C-205ENST00000588875 PDS5AQ29RF7 1337 aaKnown RBP20.63■□□□□ 0.89
SEC11C-205ENST00000588875 CCER2I3L3R5 266 aa20.63■□□□□ 0.89
SEC11C-205ENST00000588875 MECOMQ03112 1051 aa20.63■□□□□ 0.89
SEC11C-205ENST00000588875 SPTY2D1Q68D10 685 aaPredicted RBP20.63■□□□□ 0.89
SEC11C-205ENST00000588875 ZNF280CQ8ND82 737 aa20.63■□□□□ 0.89
SEC11C-205ENST00000588875 E9PSI1 815 aa20.62■□□□□ 0.89
SEC11C-205ENST00000588875 NPM3O75607 178 aaKnown RBP20.62■□□□□ 0.89
SEC11C-205ENST00000588875 HMGCRP04035 888 aa20.62■□□□□ 0.89
SEC11C-205ENST00000588875 GCLCP48506 637 aaPredicted RBP20.62■□□□□ 0.89
SEC11C-205ENST00000588875 HMGCS2P54868 508 aa20.62■□□□□ 0.89
SEC11C-205ENST00000588875 ALDH1L2Q3SY69 923 aa20.62■□□□□ 0.89
SEC11C-205ENST00000588875 OSBPL5Q9H0X9 879 aaPredicted RBP20.62■□□□□ 0.89
SEC11C-205ENST00000588875 ASCC2Q9H1I8 757 aaPredicted RBP20.62■□□□□ 0.89
SEC11C-205ENST00000588875 DOCK1Q14185 1865 aa20.62■□□□□ 0.89
SEC11C-205ENST00000588875 ALPK3Q96L96 1907 aa20.61■□□□□ 0.89
SEC11C-205ENST00000588875 RPTORQ8N122 1335 aa20.61■□□□□ 0.89
SEC11C-205ENST00000588875 SLFN5Q08AF3 891 aa20.61■□□□□ 0.89
SEC11C-205ENST00000588875 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
SEC11C-205ENST00000588875 XAGE2Q96GT9 111 aa20.61■□□□□ 0.89
SEC11C-205ENST00000588875 NBPF3Q9H094 633 aa20.61■□□□□ 0.89
SEC11C-205ENST00000588875 HMX1Q9NP08 348 aaPredicted RBP20.61■□□□□ 0.89
SEC11C-205ENST00000588875 SYN1P17600 705 aa20.6■□□□□ 0.89
SEC11C-205ENST00000588875 CAP2P40123 477 aa20.6■□□□□ 0.89
SEC11C-205ENST00000588875 SMC4Q9NTJ3 1288 aa20.6■□□□□ 0.89
SEC11C-205ENST00000588875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.6■□□□□ 0.89
SEC11C-205ENST00000588875 A0A1B0GUL7 405 aa20.59■□□□□ 0.89
SEC11C-205ENST00000588875 TFCP2Q12800 502 aa20.59■□□□□ 0.89
SEC11C-205ENST00000588875 SH3D19Q5HYK7 790 aa20.59■□□□□ 0.89
SEC11C-205ENST00000588875 GPR153Q6NV75 609 aa20.59■□□□□ 0.89
SEC11C-205ENST00000588875 Q7L0L9 218 aa20.59■□□□□ 0.89
SEC11C-205ENST00000588875 DEFB123Q8N688 67 aa20.59■□□□□ 0.89
SEC11C-205ENST00000588875 TRIB2Q92519 343 aa20.59■□□□□ 0.89
SEC11C-205ENST00000588875 MORF4L1Q9UBU8 362 aa20.59■□□□□ 0.89
SEC11C-205ENST00000588875 USP17L5A8MUK1 530 aa20.58■□□□□ 0.89
SEC11C-205ENST00000588875 PEX10O60683 326 aa20.58■□□□□ 0.89
SEC11C-205ENST00000588875 MAGEA10P43363 369 aaPredicted RBP20.58■□□□□ 0.89
SEC11C-205ENST00000588875 PABPC4Q13310 644 aaKnown RBP eCLIP20.58■□□□□ 0.892e-6■■■□□ 19.1
SEC11C-205ENST00000588875 TBC1D9Q6ZT07 1266 aa20.58■□□□□ 0.89
SEC11C-205ENST00000588875 NSUN4Q96CB9 384 aaKnown RBP20.58■□□□□ 0.89
SEC11C-205ENST00000588875 C11orf49Q9H6J7 331 aa20.58■□□□□ 0.89
SEC11C-205ENST00000588875 HMG20BQ9P0W2 317 aa20.58■□□□□ 0.89
SEC11C-205ENST00000588875 OGDHLQ9ULD0 1010 aa20.58■□□□□ 0.89
SEC11C-205ENST00000588875 NOB1Q9ULX3 412 aaKnown RBP20.58■□□□□ 0.89
SEC11C-205ENST00000588875 LRIT3Q3SXY7 679 aa20.57■□□□□ 0.88
SEC11C-205ENST00000588875 PI16Q6UXB8 463 aa20.57■□□□□ 0.88
SEC11C-205ENST00000588875 CDCA7LQ96GN5 454 aa20.57■□□□□ 0.88
SEC11C-205ENST00000588875 MEIS3Q99687 375 aa20.57■□□□□ 0.88
SEC11C-205ENST00000588875 TBC1D2Q9BYX2 928 aa20.57■□□□□ 0.88
SEC11C-205ENST00000588875 MAP4K4O95819 1239 aaPredicted RBP20.56■□□□□ 0.88
SEC11C-205ENST00000588875 LDHCP07864 332 aa20.56■□□□□ 0.88
SEC11C-205ENST00000588875 CYP2B6P20813 491 aa20.56■□□□□ 0.88
SEC11C-205ENST00000588875 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
SEC11C-205ENST00000588875 MAP3K21Q5TCX8 1036 aa20.56■□□□□ 0.88
SEC11C-205ENST00000588875 P2RX7Q99572 595 aaKnown RBP20.56■□□□□ 0.88
SEC11C-205ENST00000588875 AKAP2Q9Y2D5 859 aa20.56■□□□□ 0.88
SEC11C-205ENST00000588875 JAG1P78504 1218 aa20.55■□□□□ 0.88
SEC11C-205ENST00000588875 SPATA5Q8NB90 893 aa20.55■□□□□ 0.88
SEC11C-205ENST00000588875 NEUROD6Q96NK8 337 aa20.55■□□□□ 0.88
SEC11C-205ENST00000588875 WDR18Q9BV38 432 aa20.55■□□□□ 0.88
SEC11C-205ENST00000588875 TXNRD2Q9NNW7 524 aa20.55■□□□□ 0.88
SEC11C-205ENST00000588875 HDAC5Q9UQL6 1122 aa20.55■□□□□ 0.88
SEC11C-205ENST00000588875 COL2A1P02458 1487 aaPredicted RBP20.55■□□□□ 0.88
SEC11C-205ENST00000588875 PFASO15067 1338 aa20.54■□□□□ 0.88
SEC11C-205ENST00000588875 PRKAR2AP13861 404 aaKnown RBP20.54■□□□□ 0.88
SEC11C-205ENST00000588875 GSTO1P78417 241 aa20.54■□□□□ 0.88
SEC11C-205ENST00000588875 TEX11Q8IYF3 940 aa20.54■□□□□ 0.88
SEC11C-205ENST00000588875 TDHQ8IZJ6 230 aa20.54■□□□□ 0.88
SEC11C-205ENST00000588875 MTMR10Q9NXD2 777 aa20.54■□□□□ 0.88
SEC11C-205ENST00000588875 LOC285556D6RIA3 1793 aa20.54■□□□□ 0.88
SEC11C-205ENST00000588875 HOXA7P31268 230 aaPredicted RBP20.53■□□□□ 0.88
SEC11C-205ENST00000588875 BACE1P56817 501 aa20.53■□□□□ 0.88
SEC11C-205ENST00000588875 MTMR2Q13614 643 aa20.53■□□□□ 0.88
SEC11C-205ENST00000588875 SH3RF3Q8TEJ3 882 aaPredicted RBP20.53■□□□□ 0.88
SEC11C-205ENST00000588875 AS3MTQ9HBK9 375 aa20.53■□□□□ 0.88
SEC11C-205ENST00000588875 RAI14Q9P0K7 980 aa20.53■□□□□ 0.88
SEC11C-205ENST00000588875 HERC5Q9UII4 1024 aaKnown RBP20.53■□□□□ 0.88
SEC11C-205ENST00000588875 STXBP5LQ9Y2K9 1186 aa20.53■□□□□ 0.88
SEC11C-205ENST00000588875 SRGAP3O43295 1099 aa20.52■□□□□ 0.88
SEC11C-205ENST00000588875 COL6A1P12109 1028 aa20.52■□□□□ 0.88
SEC11C-205ENST00000588875 XRCC5P13010 732 aaKnown RBP20.52■□□□□ 0.88
SEC11C-205ENST00000588875 IRX3P78415 501 aaPredicted RBP20.52■□□□□ 0.88
SEC11C-205ENST00000588875 SHROOM1Q2M3G4 852 aaPredicted RBP20.52■□□□□ 0.88
SEC11C-205ENST00000588875 Q3C1V9 767 aa20.52■□□□□ 0.88
SEC11C-205ENST00000588875 TRMT2AQ8IZ69 625 aaKnown RBP20.52■□□□□ 0.88
SEC11C-205ENST00000588875 API5Q9BZZ5 524 aaKnown RBP20.52■□□□□ 0.88
SEC11C-205ENST00000588875 UBE2OQ9C0C9 1292 aaKnown RBP20.52■□□□□ 0.88
SEC11C-205ENST00000588875 PI4KBQ9UBF8 816 aa20.52■□□□□ 0.88
SEC11C-205ENST00000588875 RBPJLQ9UBG7 517 aa20.52■□□□□ 0.88
SEC11C-205ENST00000588875 PLXNB2O15031 1838 aa20.52■□□□□ 0.88
SEC11C-205ENST00000588875 HERVK_113P62684 666 aa20.51■□□□□ 0.87
SEC11C-205ENST00000588875 CACNB2Q08289 660 aaPredicted RBP20.51■□□□□ 0.87
SEC11C-205ENST00000588875 DIEXFQ68CQ4 756 aaKnown RBP20.51■□□□□ 0.87
SEC11C-205ENST00000588875 LHX8Q68G74 356 aa20.51■□□□□ 0.87
SEC11C-205ENST00000588875 POTEEQ6S8J3 1075 aa20.51■□□□□ 0.87
SEC11C-205ENST00000588875 GPRC5AQ8NFJ5 357 aa20.51■□□□□ 0.87
SEC11C-205ENST00000588875 USP6NLQ92738 828 aa20.51■□□□□ 0.87
SEC11C-205ENST00000588875 NUDT12Q9BQG2 462 aa20.51■□□□□ 0.87
SEC11C-205ENST00000588875 DDX60LQ5H9U9 1706 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms