RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 PDHXO00330 501 aa28.35■■■□□ 2.13
LSM7-204ENST00000587502 FOXP4Q8IVH2 680 aaPredicted RBP28.35■■■□□ 2.13
LSM7-204ENST00000587502 MAPKAPK5Q8IW41 473 aa28.35■■■□□ 2.13
LSM7-204ENST00000587502 A0A0G2JLL6 359 aaPredicted RBP28.34■■■□□ 2.13
LSM7-204ENST00000587502 KIF22Q14807 665 aa28.34■■■□□ 2.13
LSM7-204ENST00000587502 PRRT2Q7Z6L0 340 aaPredicted RBP28.34■■■□□ 2.13
LSM7-204ENST00000587502 TRIM34Q9BYJ4 488 aa28.34■■■□□ 2.13
LSM7-204ENST00000587502 DOCK1Q14185 1865 aa28.34■■■□□ 2.13
LSM7-204ENST00000587502 HLA-DOAP06340 250 aa28.33■■■□□ 2.13
LSM7-204ENST00000587502 SLURP2P0DP57 97 aa28.33■■■□□ 2.13
LSM7-204ENST00000587502 DYNLL1P63167 89 aaKnown RBP28.33■■■□□ 2.13
LSM7-204ENST00000587502 MOGSQ13724 837 aa28.33■■■□□ 2.13
LSM7-204ENST00000587502 BCL11AQ9H165 835 aa28.33■■■□□ 2.13
LSM7-204ENST00000587502 CAP2P40123 477 aa28.32■■■□□ 2.12
LSM7-204ENST00000587502 USP5P45974 858 aa28.32■■■□□ 2.12
LSM7-204ENST00000587502 RRP1P56182 461 aaKnown RBP28.32■■■□□ 2.12
LSM7-204ENST00000587502 METTL16Q86W50 562 aaKnown RBP28.32■■■□□ 2.12
LSM7-204ENST00000587502 MIGA1Q8NAN2 632 aa28.32■■■□□ 2.12
LSM7-204ENST00000587502 PARK7Q99497 189 aaKnown RBP28.32■■■□□ 2.12
LSM7-204ENST00000587502 DNAJC2Q99543 621 aaKnown RBP28.32■■■□□ 2.12
LSM7-204ENST00000587502 FAM196BA6NMK8 535 aa28.31■■■□□ 2.12
LSM7-204ENST00000587502 ATP5JP18859 108 aa28.31■■■□□ 2.12
LSM7-204ENST00000587502 SLC9C2Q5TAH2 1124 aa28.31■■■□□ 2.12
LSM7-204ENST00000587502 CRACR2BQ8N4Y2 399 aaPredicted RBP28.31■■■□□ 2.12
LSM7-204ENST00000587502 PTPN22Q9Y2R2 807 aa28.31■■■□□ 2.12
LSM7-204ENST00000587502 SLC45A1Q9Y2W3 748 aa28.31■■■□□ 2.12
LSM7-204ENST00000587502 FOCADQ5VW36 1801 aa28.3■■■□□ 2.12
LSM7-204ENST00000587502 GOLIM4O00461 696 aa28.3■■■□□ 2.12
LSM7-204ENST00000587502 MLLT1Q03111 559 aaPredicted RBP28.3■■■□□ 2.12
LSM7-204ENST00000587502 C17orf99Q6UX52 265 aa28.3■■■□□ 2.12
LSM7-204ENST00000587502 GINM1Q9NU53 330 aa28.3■■■□□ 2.12
LSM7-204ENST00000587502 PALD1Q9ULE6 856 aa28.3■■■□□ 2.12
LSM7-204ENST00000587502 GNRH1P01148 92 aa28.29■■■□□ 2.12
LSM7-204ENST00000587502 GPAT2Q6NUI2 795 aa28.29■■■□□ 2.12
LSM7-204ENST00000587502 DCTPP1Q9H773 170 aa28.29■■■□□ 2.12
LSM7-204ENST00000587502 CDK5RAP2Q96SN8 1893 aa28.28■■■□□ 2.12
LSM7-204ENST00000587502 MAGEB6P1A0A0J9YX57 407 aa28.28■■■□□ 2.12
LSM7-204ENST00000587502 TRIM75PA6NK02 468 aa28.28■■■□□ 2.12
LSM7-204ENST00000587502 USP17L5A8MUK1 530 aa28.28■■■□□ 2.12
LSM7-204ENST00000587502 PDE6AP16499 860 aa28.28■■■□□ 2.12
LSM7-204ENST00000587502 LACTBP83111 547 aaPredicted RBP28.28■■■□□ 2.12
LSM7-204ENST00000587502 GADL1Q6ZQY3 521 aa28.28■■■□□ 2.12
LSM7-204ENST00000587502 AS3MTQ9HBK9 375 aa28.28■■■□□ 2.12
LSM7-204ENST00000587502 PAG1Q9NWQ8 432 aa28.28■■■□□ 2.12
LSM7-204ENST00000587502 ASNSP08243 561 aa28.27■■■□□ 2.12
LSM7-204ENST00000587502 ZNF280CQ8ND82 737 aa28.27■■■□□ 2.12
LSM7-204ENST00000587502 HAUS7Q99871 368 aa28.27■■■□□ 2.12
LSM7-204ENST00000587502 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.27■■■□□ 2.123e-9■□□□□ 8.1
LSM7-204ENST00000587502 BOLA2Q9H3K6 86 aa28.27■■■□□ 2.12
LSM7-204ENST00000587502 SAP30BPQ9UHR5 308 aaKnown RBP28.27■■■□□ 2.12
LSM7-204ENST00000587502 TTC6Q86TZ1 520 aa28.26■■■□□ 2.11
LSM7-204ENST00000587502 RIOK1Q9BRS2 568 aaKnown RBP28.26■■■□□ 2.11
LSM7-204ENST00000587502 PHIPQ8WWQ0 1821 aa28.25■■■□□ 2.11
LSM7-204ENST00000587502 SOX10P56693 466 aa28.25■■■□□ 2.11
LSM7-204ENST00000587502 PROCA1Q8NCQ7 364 aaPredicted RBP28.25■■■□□ 2.11
LSM7-204ENST00000587502 CRNKL1Q9BZJ0 848 aaKnown RBP28.25■■■□□ 2.11
LSM7-204ENST00000587502 CPA4Q9UI42 421 aa28.25■■■□□ 2.11
LSM7-204ENST00000587502 AGTPBP1Q9UPW5 1226 aa28.25■■■□□ 2.11
LSM7-204ENST00000587502 ADGRA2Q96PE1 1338 aa28.24■■■□□ 2.11
LSM7-204ENST00000587502 ZNF532Q9HCE3 1301 aa28.24■■■□□ 2.11
LSM7-204ENST00000587502 PRMT2P55345 433 aa28.24■■■□□ 2.11
LSM7-204ENST00000587502 SPP2Q13103 211 aa28.24■■■□□ 2.11
LSM7-204ENST00000587502 GPATCH3Q96I76 525 aa28.24■■■□□ 2.11
LSM7-204ENST00000587502 EHD4Q9H223 541 aa28.24■■■□□ 2.11
LSM7-204ENST00000587502 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.24■■■□□ 2.11
LSM7-204ENST00000587502 SMARCA5O60264 1052 aaPredicted RBP28.23■■■□□ 2.11
LSM7-204ENST00000587502 RRP1BQ14684 758 aaKnown RBP28.23■■■□□ 2.11
LSM7-204ENST00000587502 WDR18Q9BV38 432 aa28.23■■■□□ 2.11
LSM7-204ENST00000587502 DNAJC18Q9H819 358 aa28.23■■■□□ 2.11
LSM7-204ENST00000587502 SERPINB13Q9UIV8 391 aa28.23■■■□□ 2.11
LSM7-204ENST00000587502 PNMA3Q9UL41 463 aa28.23■■■□□ 2.11
LSM7-204ENST00000587502 PTPRFP10586 1907 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 TCRBV5S4A2TA0A5A2 114 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 HOXD10P28358 340 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 CAP1Q01518 475 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 PABPC4Q13310 644 aaKnown RBP eCLIP28.22■■■□□ 2.118e-9■■■■□ 23
LSM7-204ENST00000587502 CCDC84Q86UT8 332 aaPredicted RBP28.22■■■□□ 2.11
LSM7-204ENST00000587502 ECHDC1Q9NTX5 307 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 SIPA1L1O43166 1804 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 ATAD5Q96QE3 1844 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 HTTP42858 3142 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 MYH1P12882 1939 aa28.22■■■□□ 2.11
LSM7-204ENST00000587502 CYP2C8P10632 490 aa28.21■■■□□ 2.11
LSM7-204ENST00000587502 ZSCAN25Q6NSZ9 544 aa28.21■■■□□ 2.11
LSM7-204ENST00000587502 NBPF11Q86T75 865 aa28.21■■■□□ 2.11
LSM7-204ENST00000587502 EDC3Q96F86 508 aaKnown RBP28.21■■■□□ 2.11
LSM7-204ENST00000587502 BCRP11274 1271 aa28.2■■■□□ 2.1
LSM7-204ENST00000587502 SH3D19Q5HYK7 790 aa28.2■■■□□ 2.1
LSM7-204ENST00000587502 SMCR8Q8TEV9 937 aaPredicted RBP28.2■■■□□ 2.1
LSM7-204ENST00000587502 ARMC5Q96C12 935 aa28.2■■■□□ 2.1
LSM7-204ENST00000587502 POLR3DP05423 398 aaPredicted RBP28.19■■■□□ 2.1
LSM7-204ENST00000587502 ADD2P35612 726 aa28.19■■■□□ 2.1
LSM7-204ENST00000587502 PSMC4P43686 418 aa28.19■■■□□ 2.1
LSM7-204ENST00000587502 ARHGAP39Q9C0H5 1083 aa28.19■■■□□ 2.1
LSM7-204ENST00000587502 PCDHB15Q9Y5E8 787 aa28.19■■■□□ 2.1
LSM7-204ENST00000587502 HMGCS2P54868 508 aa28.18■■■□□ 2.1
LSM7-204ENST00000587502 UBE3CQ15386 1083 aa28.18■■■□□ 2.1
LSM7-204ENST00000587502 SLC4A8Q2Y0W8 1093 aa28.18■■■□□ 2.1
LSM7-204ENST00000587502 TATDN1Q6P1N9 297 aa28.18■■■□□ 2.1
LSM7-204ENST00000587502 ZBTB21Q9ULJ3 1066 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms