RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 PI4KBQ9UBF8 816 aa17.89■□□□□ 0.45
CDC42EP4-208ENST00000582303 COLQQ9Y215 455 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP4-208ENST00000582303 USP17L5A8MUK1 530 aa17.88■□□□□ 0.45
CDC42EP4-208ENST00000582303 OS9Q13438 667 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP4-208ENST00000582303 TTC39AQ5SRH9 613 aa17.88■□□□□ 0.45
CDC42EP4-208ENST00000582303 U2AF1L4Q8WU68 220 aaKnown RBP17.88■□□□□ 0.45
CDC42EP4-208ENST00000582303 SHISA4Q96DD7 197 aa17.88■□□□□ 0.45
CDC42EP4-208ENST00000582303 TRIM34Q9BYJ4 488 aa17.88■□□□□ 0.45
CDC42EP4-208ENST00000582303 DOCK2Q92608 1830 aa17.88■□□□□ 0.45
CDC42EP4-208ENST00000582303 CAP2P40123 477 aa17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 FXR1P51114 621 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 SPP2Q13103 211 aa17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 ZKSCAN2Q63HK3 967 aa17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 NAA16Q6N069 864 aaPredicted RBP17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 TBC1D9Q6ZT07 1266 aa17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 ANKRD13CQ8N6S4 541 aa17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 MYH2Q9UKX2 1941 aa17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 CEP290O15078 2479 aa17.87■□□□□ 0.45
CDC42EP4-208ENST00000582303 FARP2O94887 1054 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 SGPL1O95470 568 aa17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 ASNSP08243 561 aa17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 MCAMP43121 646 aa17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 PI16Q6UXB8 463 aa17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 CERS3Q8IU89 383 aa17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 ZNF384Q8TF68 577 aa17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 GINM1Q9NU53 330 aa17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 GABRQQ9UN88 632 aa17.86■□□□□ 0.45
CDC42EP4-208ENST00000582303 PNMA6EA0A0J9YXQ4 647 aa17.85■□□□□ 0.45
CDC42EP4-208ENST00000582303 INHAP05111 366 aa17.85■□□□□ 0.45
CDC42EP4-208ENST00000582303 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
CDC42EP4-208ENST00000582303 TAOK2Q9UL54 1235 aa17.85■□□□□ 0.45
CDC42EP4-208ENST00000582303 TFRCP02786 760 aaKnown RBP17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 HMGCS2P54868 508 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 PPP4CP60510 307 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 TNNI3KQ59H18 835 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 SH3D19Q5HYK7 790 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 TREML2Q5T2D2 321 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 UBE2Q1Q7Z7E8 422 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 FOXP4Q8IVH2 680 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 CRACR2BQ8N4Y2 399 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 ZNF512BQ96KM6 892 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 UNC93B1Q9H1C4 597 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 TMOD4Q9NZQ9 345 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 FPGT-TNNI3KV9GXZ4 949 aa17.84■□□□□ 0.45
CDC42EP4-208ENST00000582303 FAM196BA6NMK8 535 aa17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 BCAR3O75815 825 aa17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 ELNP15502 786 aa17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 IRX3P78415 501 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 TMED8Q6PL24 325 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 CHRDL2Q6WN34 429 aa17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 SH3RF3Q8TEJ3 882 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 WDR18Q9BV38 432 aa17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 ZSWIM8A7E2V4 1837 aa17.83■□□□□ 0.44
CDC42EP4-208ENST00000582303 DOCK1Q14185 1865 aa17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 C19orf81C9J6K1 198 aa17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 SURF6O75683 361 aaKnown RBP17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 HLA-DOAP06340 250 aa17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 POLA2Q14181 598 aa17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 CCDC84Q86UT8 332 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 SSH3Q8TE77 659 aa17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 DEFB118Q96PH6 123 aa17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 ASCC2Q9H1I8 757 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 PAK6Q9NQU5 681 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-208ENST00000582303 EVI5O60447 810 aa17.81■□□□□ 0.44
CDC42EP4-208ENST00000582303 HMGCRP04035 888 aa17.81■□□□□ 0.44
CDC42EP4-208ENST00000582303 SLURP2P0DP57 97 aa17.81■□□□□ 0.44
CDC42EP4-208ENST00000582303 BACE1P56817 501 aa17.81■□□□□ 0.44
CDC42EP4-208ENST00000582303 ATP8B2P98198 1209 aa17.81■□□□□ 0.44
CDC42EP4-208ENST00000582303 GTF3C2Q8WUA4 911 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP4-208ENST00000582303 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
CDC42EP4-208ENST00000582303 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP4-208ENST00000582303 HOXA7P31268 230 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP4-208ENST00000582303 ANKLE1Q8NAG6 615 aa17.8■□□□□ 0.44
CDC42EP4-208ENST00000582303 SNRKQ9NRH2 765 aa17.8■□□□□ 0.44
CDC42EP4-208ENST00000582303 MORF4L1Q9UBU8 362 aa17.8■□□□□ 0.44
CDC42EP4-208ENST00000582303 RANBP2P49792 3224 aaKnown RBP17.8■□□□□ 0.44
CDC42EP4-208ENST00000582303 FLT1P17948 1338 aa17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 A0A1W2PPC1 479 aa17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 USP17L10C9JJH3 530 aa17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 MTMR2Q13614 643 aa17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 NECAB2Q7Z6G3 386 aa17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 METTL16Q86W50 562 aaKnown RBP17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 CCAR1Q8IX12 1150 aaKnown RBP17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 TRMT44Q8IYL2 757 aaKnown RBP17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 SOCS4Q8WXH5 440 aa17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 DBNDD2Q9BQY9 259 aa17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 HMX1Q9NP08 348 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP4-208ENST00000582303 TRIOBPQ9H2D6 2365 aa17.78■□□□□ 0.44
CDC42EP4-208ENST00000582303 CYP2E1P05181 493 aaPredicted RBP17.78■□□□□ 0.44
CDC42EP4-208ENST00000582303 PDE3AQ14432 1141 aa17.78■□□□□ 0.44
CDC42EP4-208ENST00000582303 ERC1Q8IUD2 1116 aa17.78■□□□□ 0.44
CDC42EP4-208ENST00000582303 GPRC5AQ8NFJ5 357 aa17.78■□□□□ 0.44
CDC42EP4-208ENST00000582303 CRISPLD2Q9H0B8 497 aa17.78■□□□□ 0.44
CDC42EP4-208ENST00000582303 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDC42EP4-208ENST00000582303 NOP58Q9Y2X3 529 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms