RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 KLRK1P26718 216 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 CCT2P78371 535 aaKnown RBP10.88□□□□□ -0.67
SS18-220ENST00000582092 HTRA3P83110 453 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 CTDSPL2Q05D32 466 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 KIF4BQ2VIQ3 1234 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 TMEM67Q5HYA8 995 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
SS18-220ENST00000582092 GIMAP6Q6P9H5 292 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 TMTC2Q8N394 836 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 GZF1Q9H116 711 aaPredicted RBP10.88□□□□□ -0.67
SS18-220ENST00000582092 CD209Q9NNX6 404 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 PGAP2Q9UHJ9 254 aa10.88□□□□□ -0.67
SS18-220ENST00000582092 ABT1Q9ULW3 272 aaKnown RBP10.88□□□□□ -0.67
SS18-220ENST00000582092 GOLGA8BA8MQT2 603 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 B4E1Z4 1266 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 ZBTB22O15209 634 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 PCP11498 1178 aaKnown RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 PLCG2P16885 1265 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 DYNLL1P63167 89 aaKnown RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 PPARAQ07869 468 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 PKP1Q13835 747 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 FOXD4L6Q3SYB3 417 aaPredicted RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 TBC1D10BQ4KMP7 808 aaPredicted RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 FOXD4L3Q6VB84 417 aaPredicted RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 MB21D2Q8IYB1 491 aaPredicted RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 ESR2Q92731 530 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 SYAP1Q96A49 352 aaPredicted RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 NSUN4Q96CB9 384 aaKnown RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 UBAC1Q9BSL1 405 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 KCNQ5Q9NR82 932 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 ATP8A2Q9NTI2 1148 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 AATFQ9NY61 560 aaKnown RBP eCLIP10.87□□□□□ -0.67
SS18-220ENST00000582092 ANGEL1Q9UNK9 670 aaKnown RBP10.87□□□□□ -0.67
SS18-220ENST00000582092 JAG2Q9Y219 1238 aa10.87□□□□□ -0.67
SS18-220ENST00000582092 SALL1Q9NSC2 1324 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 KDM4AO75164 1064 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 MBD3O95983 291 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 F13A1P00488 732 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 PDIA3P30101 505 aaKnown RBP10.86□□□□□ -0.67
SS18-220ENST00000582092 ECE1P42892 770 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 PDE4BQ07343 736 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 DEFB115Q30KQ5 88 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 TXNRD3Q86VQ6 643 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 SULF1Q8IWU6 871 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 STK11IPQ8N1F8 1099 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 FBXL16Q8N461 479 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 JMYQ8N9B5 988 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 SDR42E1Q8WUS8 393 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 STAG1Q8WVM7 1258 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 ZDHHC9Q9Y397 364 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 SLC12A7Q9Y666 1083 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 MYH13Q9UKX3 1938 aa10.86□□□□□ -0.67
SS18-220ENST00000582092 GOLGA6L4A6NEF3 574 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 FOXP2O15409 715 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 POLR3DP05423 398 aaPredicted RBP10.85□□□□□ -0.67
SS18-220ENST00000582092 IL1R1P14778 569 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 PRDX5P30044 214 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 METAP2P50579 478 aaKnown RBP eCLIP10.85□□□□□ -0.67
SS18-220ENST00000582092 ZNF280AP59817 542 aaPredicted RBP10.85□□□□□ -0.67
SS18-220ENST00000582092 GTF2IP78347 998 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 SCRN1Q12765 414 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 WTAPQ15007 396 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 MFSD14BQ5SR56 506 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 L1TD1Q5T7N2 865 aaKnown RBP10.85□□□□□ -0.67
SS18-220ENST00000582092 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
SS18-220ENST00000582092 KRT26Q7Z3Y9 468 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 IQCA1Q86XH1 822 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 TBC1D10CQ8IV04 446 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 TRPM4Q8TD43 1214 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 AGXT2Q9BYV1 514 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 ZSCAN16Q9H4T2 348 aaPredicted RBP10.85□□□□□ -0.67
SS18-220ENST00000582092 ZNF287Q9HBT7 754 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 MYOZ2Q9NPC6 264 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 MKRN1Q9UHC7 482 aaKnown RBP10.85□□□□□ -0.67
SS18-220ENST00000582092 DOCK2Q92608 1830 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 CNTNAP1P78357 1384 aa10.85□□□□□ -0.67
SS18-220ENST00000582092 MYO5AQ9Y4I1 1855 aaKnown RBP10.85□□□□□ -0.67
SS18-220ENST00000582092 CCDC196A0A1B0GTZ2 297 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 GOLGA8AA7E2F4 631 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 ZBTB43O43298 467 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
SS18-220ENST00000582092 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
SS18-220ENST00000582092 HIRAP54198 1017 aaPredicted RBP10.84□□□□□ -0.67
SS18-220ENST00000582092 FKBP1AP62942 108 aaKnown RBP10.84□□□□□ -0.67
SS18-220ENST00000582092 KRT85P78386 507 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 TRIM29Q14134 588 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 DACT2Q5SW24 774 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 GMLQ99445 158 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 RIOK1Q9BRS2 568 aaKnown RBP10.84□□□□□ -0.67
SS18-220ENST00000582092 MTA3Q9BTC8 594 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 GLIS2Q9BZE0 524 aaPredicted RBP10.84□□□□□ -0.67
SS18-220ENST00000582092 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 EPB41L4AQ9HCS5 686 aaPredicted RBP10.84□□□□□ -0.67
SS18-220ENST00000582092 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
SS18-220ENST00000582092 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 ECM29Q5VYK3 1845 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
SS18-220ENST00000582092 SHTN1A0MZ66 631 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms