RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ATP8A2Q9NTI2 1148 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 GINM1Q9NU53 330 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
SNORD55-201ENST00000581525 CXCL11O14625 94 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 IRF6O14896 467 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
SNORD55-201ENST00000581525 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 CAP2P40123 477 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 RRP1BQ14684 758 aaKnown RBP15.25■□□□□ 0.03
SNORD55-201ENST00000581525 SLFNL1Q499Z3 407 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 PLEKHM2Q8IWE5 1019 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 LCORLQ8N3X6 602 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 PUS7LQ9H0K6 701 aaKnown RBP15.25■□□□□ 0.03
SNORD55-201ENST00000581525 DNAJC18Q9H819 358 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNORD55-201ENST00000581525 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
SNORD55-201ENST00000581525 DCP1AQ9NPI6 582 aaPredicted RBP15.25■□□□□ 0.03
SNORD55-201ENST00000581525 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 CDK5RAP2Q96SN8 1893 aa15.25■□□□□ 0.03
SNORD55-201ENST00000581525 TRPA1O75762 1119 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 PTPRAP18433 802 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 USP5P45974 858 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 LBX1P52954 281 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 IRX6P78412 446 aaPredicted RBP15.24■□□□□ 0.03
SNORD55-201ENST00000581525 GABPAQ06546 454 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 MOGSQ13724 837 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 LRRFIP1Q32MZ4 808 aaKnown RBP15.24■□□□□ 0.03
SNORD55-201ENST00000581525 TATDN1Q6P1N9 297 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 TTC6Q86TZ1 520 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 BRI3BPQ8WY22 251 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 APPBP2Q92624 585 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 OSBP2Q969R2 916 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 STRBPQ96SI9 672 aaKnown RBP15.24■□□□□ 0.03
SNORD55-201ENST00000581525 TBC1D2Q9BYX2 928 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 LNPKQ9C0E8 428 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 AFG3L2Q9Y4W6 797 aa15.24■□□□□ 0.03
SNORD55-201ENST00000581525 IGF2BP3O00425 579 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNORD55-201ENST00000581525 MBD4O95243 580 aa15.23■□□□□ 0.03
SNORD55-201ENST00000581525 MKRN3Q13064 507 aaKnown RBP15.23■□□□□ 0.03
SNORD55-201ENST00000581525 GIMAP6Q6P9H5 292 aa15.23■□□□□ 0.03
SNORD55-201ENST00000581525 EVI5LQ96CN4 794 aa15.23■□□□□ 0.03
SNORD55-201ENST00000581525 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
SNORD55-201ENST00000581525 ARMT1Q9H993 441 aa15.23■□□□□ 0.03
SNORD55-201ENST00000581525 SIPA1L1O43166 1804 aa15.22■□□□□ 0.03
SNORD55-201ENST00000581525 HLA-DOAP06340 250 aa15.22■□□□□ 0.03
SNORD55-201ENST00000581525 CETPP11597 493 aa15.22■□□□□ 0.03
SNORD55-201ENST00000581525 PLCD1P51178 756 aa15.22■□□□□ 0.03
SNORD55-201ENST00000581525 SNAPC2Q13487 334 aa15.22■□□□□ 0.03
SNORD55-201ENST00000581525 ZMYM1Q5SVZ6 1142 aa15.22■□□□□ 0.03
SNORD55-201ENST00000581525 COL13A1Q5TAT6 717 aaPredicted RBP15.22■□□□□ 0.03
SNORD55-201ENST00000581525 B4GALNT3Q6L9W6 998 aa15.22■□□□□ 0.03
SNORD55-201ENST00000581525 SERPINB13Q9UIV8 391 aa15.22■□□□□ 0.03
SNORD55-201ENST00000581525 AK9Q5TCS8 1911 aa15.21■□□□□ 0.03
SNORD55-201ENST00000581525 PRKAB2O43741 272 aa15.21■□□□□ 0.03
SNORD55-201ENST00000581525 SBK1Q52WX2 424 aa15.21■□□□□ 0.03
SNORD55-201ENST00000581525 OTUD7BQ6GQQ9 843 aa15.21■□□□□ 0.03
SNORD55-201ENST00000581525 SDR42E1Q8WUS8 393 aa15.21■□□□□ 0.03
SNORD55-201ENST00000581525 SAP30BPQ9UHR5 308 aaKnown RBP15.21■□□□□ 0.03
SNORD55-201ENST00000581525 ZHX2Q9Y6X8 837 aa15.21■□□□□ 0.03
SNORD55-201ENST00000581525 DDX60LQ5H9U9 1706 aaKnown RBP15.2■□□□□ 0.02
SNORD55-201ENST00000581525 CCL15-CCL14A0A0B4J2E2 113 aa15.2■□□□□ 0.02
SNORD55-201ENST00000581525 A0A0G2JLL6 359 aaPredicted RBP15.2■□□□□ 0.02
SNORD55-201ENST00000581525 FAM196BA6NMK8 535 aa15.2■□□□□ 0.02
SNORD55-201ENST00000581525 GSG1L2A8MUP6 293 aa15.2■□□□□ 0.02
SNORD55-201ENST00000581525 JAG1P78504 1218 aa15.2■□□□□ 0.02
SNORD55-201ENST00000581525 CCL15Q16663 113 aa15.2■□□□□ 0.02
SNORD55-201ENST00000581525 C12orf60Q5U649 245 aa15.2■□□□□ 0.02
SNORD55-201ENST00000581525 PRRT2Q7Z6L0 340 aaPredicted RBP15.2■□□□□ 0.02
SNORD55-201ENST00000581525 WDR18Q9BV38 432 aa15.2■□□□□ 0.02
SNORD55-201ENST00000581525 PICK1Q9NRD5 415 aa15.2■□□□□ 0.02
SNORD55-201ENST00000581525 MYH7P12883 1935 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 ASNSP08243 561 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 GNAT2P19087 354 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 PDE4AP27815 886 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 SHMT1P34896 483 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 GPAT2Q6NUI2 795 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 ANKRD23Q86SG2 305 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 FAM43AQ8N2R8 423 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 R3HDMLQ9H3Y0 253 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 MCM9Q9NXL9 1143 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 TSKSQ9UJT2 592 aa15.19■□□□□ 0.02
SNORD55-201ENST00000581525 USP17L5A8MUK1 530 aa15.18■□□□□ 0.02
SNORD55-201ENST00000581525 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
SNORD55-201ENST00000581525 BTBD19C9JJ37 291 aa15.18■□□□□ 0.02
SNORD55-201ENST00000581525 GPAA1O43292 621 aa15.18■□□□□ 0.02
SNORD55-201ENST00000581525 POLR3DP05423 398 aaPredicted RBP15.18■□□□□ 0.02
SNORD55-201ENST00000581525 CTR9Q6PD62 1173 aa15.18■□□□□ 0.02
SNORD55-201ENST00000581525 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
SNORD55-201ENST00000581525 FSD1Q9BTV5 496 aa15.18■□□□□ 0.02
SNORD55-201ENST00000581525 SLC45A1Q9Y2W3 748 aa15.18■□□□□ 0.02
SNORD55-201ENST00000581525 SLC4A4Q9Y6R1 1079 aa15.18■□□□□ 0.02
SNORD55-201ENST00000581525 MYH1P12882 1939 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 USP17L12C9JPN9 530 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 USP17L21D6R901 530 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 M0R2C6 588 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 GPR25O00155 361 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 TBC1D8O95759 1140 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 FASTKD5Q7L8L6 764 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms