RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 DHX36Q9H2U1 1008 aaKnown RBP22.01■■□□□ 1.11
MKS1-209ENST00000580127 RFX7Q2KHR2 1363 aa22■■□□□ 1.11
MKS1-209ENST00000580127 USP17L5A8MUK1 530 aa22■■□□□ 1.11
MKS1-209ENST00000580127 CCER2I3L3R5 266 aa22■■□□□ 1.11
MKS1-209ENST00000580127 FARP2O94887 1054 aaPredicted RBP22■■□□□ 1.11
MKS1-209ENST00000580127 ARID4AP29374 1257 aaPredicted RBP22■■□□□ 1.11
MKS1-209ENST00000580127 CCDC158Q5M9N0 1113 aa22■■□□□ 1.11
MKS1-209ENST00000580127 ATF7IPQ6VMQ6 1270 aa22■■□□□ 1.11
MKS1-209ENST00000580127 TBC1D9Q6ZT07 1266 aa22■■□□□ 1.11
MKS1-209ENST00000580127 TEX11Q8IYF3 940 aa22■■□□□ 1.11
MKS1-209ENST00000580127 ANKRD13CQ8N6S4 541 aa22■■□□□ 1.11
MKS1-209ENST00000580127 TRIM34Q9BYJ4 488 aa22■■□□□ 1.11
MKS1-209ENST00000580127 UNC93B1Q9H1C4 597 aa22■■□□□ 1.11
MKS1-209ENST00000580127 PI4KBQ9UBF8 816 aa22■■□□□ 1.11
MKS1-209ENST00000580127 TAOK2Q9UL54 1235 aa22■■□□□ 1.11
MKS1-209ENST00000580127 DOCK1Q14185 1865 aa22■■□□□ 1.11
MKS1-209ENST00000580127 IGSF3O75054 1194 aa21.99■■□□□ 1.11
MKS1-209ENST00000580127 CAP2P40123 477 aa21.99■■□□□ 1.11
MKS1-209ENST00000580127 FAM110CQ1W6H9 321 aa21.99■■□□□ 1.11
MKS1-209ENST00000580127 CHRDL2Q6WN34 429 aa21.99■■□□□ 1.11
MKS1-209ENST00000580127 INHAP05111 366 aa21.98■■□□□ 1.11
MKS1-209ENST00000580127 ELNP15502 786 aa21.98■■□□□ 1.11
MKS1-209ENST00000580127 OS9Q13438 667 aaPredicted RBP21.98■■□□□ 1.11
MKS1-209ENST00000580127 NAA16Q6N069 864 aaPredicted RBP21.97■■□□□ 1.11
MKS1-209ENST00000580127 UBE2Q1Q7Z7E8 422 aa21.97■■□□□ 1.11
MKS1-209ENST00000580127 FOXP4Q8IVH2 680 aaPredicted RBP21.97■■□□□ 1.11
MKS1-209ENST00000580127 COL2A1P02458 1487 aaPredicted RBP21.96■■□□□ 1.11
MKS1-209ENST00000580127 PTPRFP10586 1907 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 TRIOBPQ9H2D6 2365 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 EVI5O60447 810 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 TRIM27P14373 513 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 HMGCS2P54868 508 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 TTC39AQ5SRH9 613 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 TREML2Q5T2D2 321 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 DEFB118Q96PH6 123 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 GPR108Q9NPR9 543 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 GINM1Q9NU53 330 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 TMOD4Q9NZQ9 345 aa21.96■■□□□ 1.11
MKS1-209ENST00000580127 ASNSP08243 561 aa21.95■■□□□ 1.1
MKS1-209ENST00000580127 PI16Q6UXB8 463 aa21.95■■□□□ 1.1
MKS1-209ENST00000580127 ZNF384Q8TF68 577 aa21.95■■□□□ 1.1
MKS1-209ENST00000580127 PHIPQ8WWQ0 1821 aa21.94■■□□□ 1.1
MKS1-209ENST00000580127 BRCA2P51587 3418 aa21.94■■□□□ 1.1
MKS1-209ENST00000580127 FAM196BA6NMK8 535 aa21.94■■□□□ 1.1
MKS1-209ENST00000580127 SLURP2P0DP57 97 aa21.94■■□□□ 1.1
MKS1-209ENST00000580127 MCAMP43121 646 aa21.94■■□□□ 1.1
MKS1-209ENST00000580127 IRX3P78415 501 aaPredicted RBP21.94■■□□□ 1.1
MKS1-209ENST00000580127 CCDC84Q86UT8 332 aaPredicted RBP21.94■■□□□ 1.1
MKS1-209ENST00000580127 CRACR2BQ8N4Y2 399 aaPredicted RBP21.94■■□□□ 1.1
MKS1-209ENST00000580127 CLUAP1Q96AJ1 413 aa21.94■■□□□ 1.1
MKS1-209ENST00000580127 WDR18Q9BV38 432 aa21.94■■□□□ 1.1
MKS1-209ENST00000580127 PNMA6EA0A0J9YXQ4 647 aa21.93■■□□□ 1.1
MKS1-209ENST00000580127 C19orf81C9J6K1 198 aa21.93■■□□□ 1.1
MKS1-209ENST00000580127 PPP4CP60510 307 aa21.93■■□□□ 1.1
MKS1-209ENST00000580127 SH3D19Q5HYK7 790 aa21.93■■□□□ 1.1
MKS1-209ENST00000580127 ZKSCAN2Q63HK3 967 aa21.93■■□□□ 1.1
MKS1-209ENST00000580127 CCAR1Q8IX12 1150 aaKnown RBP21.93■■□□□ 1.1
MKS1-209ENST00000580127 DOCK3Q8IZD9 2030 aa21.93■■□□□ 1.1
MKS1-209ENST00000580127 SH3RF3Q8TEJ3 882 aaPredicted RBP21.93■■□□□ 1.1
MKS1-209ENST00000580127 ASCC2Q9H1I8 757 aaPredicted RBP21.93■■□□□ 1.1
MKS1-209ENST00000580127 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.93■■□□□ 1.1
MKS1-209ENST00000580127 ZBTB7BO15156 539 aaPredicted RBP21.92■■□□□ 1.1
MKS1-209ENST00000580127 HMGCRP04035 888 aa21.92■■□□□ 1.1
MKS1-209ENST00000580127 NECAB2Q7Z6G3 386 aa21.92■■□□□ 1.1
MKS1-209ENST00000580127 PAK6Q9NQU5 681 aaPredicted RBP21.92■■□□□ 1.1
MKS1-209ENST00000580127 AATFQ9NY61 560 aaKnown RBP eCLIP21.92■■□□□ 1.1
MKS1-209ENST00000580127 RBM27Q9P2N5 1060 aaKnown RBP21.92■■□□□ 1.1
MKS1-209ENST00000580127 SURF6O75683 361 aaKnown RBP21.91■■□□□ 1.1
MKS1-209ENST00000580127 BCAR3O75815 825 aa21.91■■□□□ 1.1
MKS1-209ENST00000580127 HLA-DOAP06340 250 aa21.91■■□□□ 1.1
MKS1-209ENST00000580127 BACE1P56817 501 aa21.91■■□□□ 1.1
MKS1-209ENST00000580127 CERS3Q8IU89 383 aa21.91■■□□□ 1.1
MKS1-209ENST00000580127 ANKLE1Q8NAG6 615 aa21.91■■□□□ 1.1
MKS1-209ENST00000580127 HMX1Q9NP08 348 aaPredicted RBP21.91■■□□□ 1.1
MKS1-209ENST00000580127 SNRKQ9NRH2 765 aa21.91■■□□□ 1.1
MKS1-209ENST00000580127 A0A1W2PPC1 479 aa21.9■■□□□ 1.1
MKS1-209ENST00000580127 USP17L10C9JJH3 530 aa21.9■■□□□ 1.1
MKS1-209ENST00000580127 ATP8B2P98198 1209 aa21.9■■□□□ 1.1
MKS1-209ENST00000580127 TNNI3KQ59H18 835 aa21.9■■□□□ 1.1
MKS1-209ENST00000580127 TGFBRAP1Q8WUH2 860 aa21.9■■□□□ 1.1
MKS1-209ENST00000580127 ZNF512BQ96KM6 892 aaPredicted RBP21.9■■□□□ 1.1
MKS1-209ENST00000580127 CRISPLD2Q9H0B8 497 aa21.9■■□□□ 1.1
MKS1-209ENST00000580127 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.9■■□□□ 1.1
MKS1-209ENST00000580127 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.9■■□□□ 1.1
MKS1-209ENST00000580127 FPGT-TNNI3KV9GXZ4 949 aa21.9■■□□□ 1.1
MKS1-209ENST00000580127 RPTORQ8N122 1335 aa21.89■■□□□ 1.1
MKS1-209ENST00000580127 HOXA7P31268 230 aaPredicted RBP21.89■■□□□ 1.09
MKS1-209ENST00000580127 TRMT44Q8IYL2 757 aaKnown RBP21.89■■□□□ 1.09
MKS1-209ENST00000580127 GPRC5AQ8NFJ5 357 aa21.89■■□□□ 1.09
MKS1-209ENST00000580127 GTF3C2Q8WUA4 911 aaPredicted RBP21.89■■□□□ 1.09
MKS1-209ENST00000580127 MTMR2Q13614 643 aa21.88■■□□□ 1.09
MKS1-209ENST00000580127 MAPKAPK5Q8IW41 473 aa21.88■■□□□ 1.09
MKS1-209ENST00000580127 SSH3Q8TE77 659 aa21.88■■□□□ 1.09
MKS1-209ENST00000580127 PAWRQ96IZ0 340 aaKnown RBP21.88■■□□□ 1.09
MKS1-209ENST00000580127 MORF4L1Q9UBU8 362 aa21.88■■□□□ 1.09
MKS1-209ENST00000580127 ATAD5Q96QE3 1844 aa21.87■■□□□ 1.09
MKS1-209ENST00000580127 POLA2Q14181 598 aa21.87■■□□□ 1.09
MKS1-209ENST00000580127 PDE3AQ14432 1141 aa21.87■■□□□ 1.09
MKS1-209ENST00000580127 TMED8Q6PL24 325 aaPredicted RBP21.87■■□□□ 1.09
MKS1-209ENST00000580127 FTSJ3Q8IY81 847 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms