RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-216ENST00000579853 HDAC5Q9UQL6 1122 aa15.18■□□□□ 0.02
CDK5RAP3-216ENST00000579853 RFX7Q2KHR2 1363 aa15.18■□□□□ 0.02
CDK5RAP3-216ENST00000579853 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-216ENST00000579853 PHIPQ8WWQ0 1821 aa15.17■□□□□ 0.02
CDK5RAP3-216ENST00000579853 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-216ENST00000579853 OSBPL5Q9H0X9 879 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-216ENST00000579853 C11orf49Q9H6J7 331 aa15.17■□□□□ 0.02
CDK5RAP3-216ENST00000579853 IL15P40933 162 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-216ENST00000579853 PHKA1P46020 1223 aa15.16■□□□□ 0.02
CDK5RAP3-216ENST00000579853 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
CDK5RAP3-216ENST00000579853 ZNF280CQ8ND82 737 aa15.16■□□□□ 0.02
CDK5RAP3-216ENST00000579853 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDK5RAP3-216ENST00000579853 OGDHLQ9ULD0 1010 aa15.16■□□□□ 0.02
CDK5RAP3-216ENST00000579853 ZMYND8Q9ULU4 1186 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-216ENST00000579853 PRUNE2Q8WUY3 3088 aa15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 BTDP43251 543 aa15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 MAGEA10P43363 369 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 SPP2Q13103 211 aa15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 PICALMQ13492 652 aa15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 CCDC102BQ68D86 513 aa15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 TRMT44Q8IYL2 757 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 UBE2OQ9C0C9 1292 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 SIL1Q9H173 461 aa15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 GJD2Q9UKL4 321 aa15.15■□□□□ 0.02
CDK5RAP3-216ENST00000579853 UBTFL1P0CB47 393 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ASCC2Q9H1I8 757 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-216ENST00000579853 AS3MTQ9HBK9 375 aa15.14■□□□□ 0.01
CDK5RAP3-216ENST00000579853 MTMR10Q9NXD2 777 aa15.14■□□□□ 0.01
CDK5RAP3-216ENST00000579853 MROH7-TTC4A0A0A0MT08 1334 aa15.14■□□□□ 0.01
CDK5RAP3-216ENST00000579853 EYSQ5T1H1 3165 aa15.14■□□□□ 0.01
CDK5RAP3-216ENST00000579853 SPTBN5Q9NRC6 3674 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 GPR75-ASB3A0A0A6YYF3 556 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 USP17L5A8MUK1 530 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 LDHCP07864 332 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 XRCC5P13010 732 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 HMGCS2P54868 508 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 SH3D19Q5HYK7 790 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 SOCS4Q8WXH5 440 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 MORF4L1Q9UBU8 362 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 LOC285556D6RIA3 1793 aa15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 COL2A1P02458 1487 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-216ENST00000579853 DDX60LQ5H9U9 1706 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ANP32CO43423 234 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 SYN1P17600 705 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 CAP2P40123 477 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 IRX3P78415 501 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 GSTO1P78417 241 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 RASGRF1Q13972 1273 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 MAP3K21Q5TCX8 1036 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 Q7L0L9 218 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 CCDC84Q86UT8 332 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 NUDT12Q9BQG2 462 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 HERC5Q9UII4 1024 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 AKAP2Q9Y2D5 859 aa15.12■□□□□ 0.01
CDK5RAP3-216ENST00000579853 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-216ENST00000579853 RHBDL3P58872 404 aa15.11■□□□□ 0.01
CDK5RAP3-216ENST00000579853 PDE3AQ14432 1141 aa15.11■□□□□ 0.01
CDK5RAP3-216ENST00000579853 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-216ENST00000579853 SSH1Q8WYL5 1049 aa15.11■□□□□ 0.01
CDK5RAP3-216ENST00000579853 TRIB2Q92519 343 aa15.11■□□□□ 0.01
CDK5RAP3-216ENST00000579853 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-216ENST00000579853 SLURP2P0DP57 97 aa15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 MAPK4P31152 587 aa15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 MECOMQ03112 1051 aa15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ALDH1L2Q3SY69 923 aa15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 FAM109BQ6ICB4 259 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 WDR18Q9BV38 432 aa15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 COPRSQ9NQ92 184 aa15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 TMOD4Q9NZQ9 345 aa15.1■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ATAD5Q96QE3 1844 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ASNSP08243 561 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 COL6A1P12109 1028 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 CYP2B6P20813 491 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ADORA1P30542 326 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 TRIM32Q13049 653 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 CCAR1Q8IX12 1150 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 GPRC5AQ8NFJ5 357 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 DHX36Q9H2U1 1008 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 GINM1Q9NU53 330 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 PFASO15067 1338 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 ZNF521Q96K83 1311 aa15.09■□□□□ 0.01
CDK5RAP3-216ENST00000579853 C19orf81C9J6K1 198 aa15.08■□□□□ 0
CDK5RAP3-216ENST00000579853 E9PSI1 815 aa15.08■□□□□ 0
CDK5RAP3-216ENST00000579853 BACE1P56817 501 aa15.08■□□□□ 0
CDK5RAP3-216ENST00000579853 TIMM10P62072 90 aa15.08■□□□□ 0
CDK5RAP3-216ENST00000579853 PI4KBQ9UBF8 816 aa15.08■□□□□ 0
CDK5RAP3-216ENST00000579853 CDH23Q9H251 3354 aa15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 A0A1B0GUL7 405 aa15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 FAM196BA6NMK8 535 aa15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 RGS2P41220 211 aa15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 HERVK_113P62684 666 aa15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms