RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 DYNC1I1O14576 645 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NEMFO60524 1076 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MMP1P03956 469 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MARCKSP29966 332 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SYKP43405 635 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RPS8P62241 208 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 DYNLL1P63167 89 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TPM4P67936 248 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RESP18Q5W5W9 173 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TMED8Q6PL24 325 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NBPF11Q86T75 865 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CRACR2BQ8N4Y2 399 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SDR42E1Q8WUS8 393 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NLRP3Q96P20 1036 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 FOXP1Q9H334 677 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TNKSO95271 1327 aa10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 KIAA1551Q9HCM1 1747 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MYH13Q9UKX3 1938 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 A0A087WWV3 80 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SMTNL1A8MU46 457 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ZPR1O75312 459 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 FGRP09769 529 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SHC4Q6S5L8 630 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NBPF5PQ86XG9 351 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NOSTRINQ8IVI9 506 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 DIS3L2Q8IYB7 885 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 FANCBQ8NB91 859 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MYRIPQ8NFW9 859 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NUP133Q8WUM0 1156 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NGLY1Q96IV0 654 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ZSCAN10Q96SZ4 725 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SETDB2Q96T68 719 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RNF26Q9BY78 433 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NRBP1Q9UHY1 535 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TAF1P21675 1872 aa10.78□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TNRC6CQ9HCJ0 1690 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 UBE2Q2LH0YL09 131 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 GNPATO15228 680 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 RRP9O43818 475 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 IGSF3O75054 1194 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CALM1P0DP23 149 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CALM2P0DP24 149 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CALM3P0DP25 149 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 HIBADHP31937 336 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 GUCY1A2P33402 732 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KCNQ4P56696 695 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 DPCR1Q3MIW9 517 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CCDC144BQ3MJ40 725 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 RILPL1Q5EBL4 403 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ELOA2Q8IYF1 753 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KRI1Q8N9T8 703 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ERCC4Q92889 916 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 NSUN4Q96CB9 384 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 C8orf37Q96NL8 207 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CRNKL1Q9BZJ0 848 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 RBM28Q9NW13 759 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TUBE1Q9UJT0 475 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KCNJ14Q9UNX9 436 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 RTCBQ9Y3I0 505 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MORC2Q9Y6X9 1032 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 LY75O60449 1722 aa10.77□□□□□ -0.69
CDK5RAP3-208ENST00000578525 WTIPA6NIX2 430 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 BTBD18B2RXH4 712 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ORC4O43929 436 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 DDAH1O94760 285 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KLRK1P26718 216 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 AKAP17AQ02040 695 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MECOMQ03112 1051 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 LRMPQ12912 555 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CTR9Q6PD62 1173 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TPTE2Q6XPS3 522 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KRBA2Q6ZNG9 492 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SMIM5Q71RC9 77 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CATIPQ7Z7H3 387 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ZNF384Q8TF68 577 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CACTINQ8WUQ7 758 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 FBXW7Q969H0 707 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CCNL1Q9UK58 526 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CEP131Q9UPN4 1083 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TAF1LQ8IZX4 1826 aa10.76□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CYP2D7A0A087X1C5 515 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 BIN1O00499 593 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 IKBKBO14920 756 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PRPF3O43395 683 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 XBP1P17861 261 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PTPREP23469 700 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TOB1P50616 345 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 GSDMDP57764 484 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CHAF1AQ13111 956 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 DHX8Q14562 1220 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SBK1Q52WX2 424 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 IFIT1BQ5T764 474 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SPTY2D1Q68D10 685 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PTF1AQ7RTS3 328 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms