RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 DNMT1P26358 1616 aaKnown RBP11.97□□□□□ -0.49
SEC22B-201ENST00000578049 POLR2DO15514 142 aaKnown RBP11.97□□□□□ -0.49
SEC22B-201ENST00000578049 ATP5JP18859 108 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 ASIC2Q16515 512 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 SND1Q7KZF4 910 aaKnown RBP eCLIP11.97□□□□□ -0.49
SEC22B-201ENST00000578049 RAB3IL1Q8TBN0 382 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 EYA1Q99502 592 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 DENND2AQ9ULE3 1009 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 SYCP2Q9BX26 1530 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 ABCC10Q5T3U5 1492 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 BUB1BO60566 1050 aaPredicted RBP11.97□□□□□ -0.49
SEC22B-201ENST00000578049 TNFAIP3P21580 790 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 TTC6Q86TZ1 520 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 PLBD2Q8NHP8 589 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 BCAP29Q9UHQ4 241 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 SSX2IPQ9Y2D8 614 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 HPDP32754 393 aaPredicted RBP11.97□□□□□ -0.49
SEC22B-201ENST00000578049 IL13P35225 146 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 RPS6KA1Q15418 735 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 VSIG1Q86XK7 387 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 SSH3Q8TE77 659 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 HOMER3Q9NSC5 361 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 CWF19L2Q2TBE0 894 aaKnown RBP11.97□□□□□ -0.49
SEC22B-201ENST00000578049 OTUD7AQ8TE49 926 aaPredicted RBP11.97□□□□□ -0.49
SEC22B-201ENST00000578049 RNF40O75150 1001 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 CDC37L1Q7L3B6 337 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 MTMR6Q9Y217 621 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 SPOPO43791 374 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.49
SEC22B-201ENST00000578049 CCDC25Q86WR0 208 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 LRRC8AQ8IWT6 810 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 CCDC63Q8NA47 563 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 OSBPL3Q9H4L5 887 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 SARNPP82979 210 aaKnown RBP11.96□□□□□ -0.49
SEC22B-201ENST00000578049 DMTNQ08495 405 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 SETSIPP0DME0 302 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 LGSNQ5TDP6 509 aa11.96□□□□□ -0.49
SEC22B-201ENST00000578049 HOXA7P31268 230 aaPredicted RBP11.96□□□□□ -0.5
SEC22B-201ENST00000578049 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.5
SEC22B-201ENST00000578049 ZSWIM6Q9HCJ5 1215 aa11.96□□□□□ -0.5
SEC22B-201ENST00000578049 MCM9Q9NXL9 1143 aa11.96□□□□□ -0.5
SEC22B-201ENST00000578049 HYOU1Q9Y4L1 999 aa11.96□□□□□ -0.5
SEC22B-201ENST00000578049 CPA1P15085 419 aa11.96□□□□□ -0.5
SEC22B-201ENST00000578049 DNM2P50570 870 aa11.96□□□□□ -0.5
SEC22B-201ENST00000578049 MAGEB6Q8N7X4 407 aa11.96□□□□□ -0.5
SEC22B-201ENST00000578049 PARP1P09874 1014 aaKnown RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 IRX4P78413 519 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 CFAP157Q5JU67 520 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 IP6K1Q92551 441 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 MTX1Q13505 466 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 LIN9Q5TKA1 542 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 PFKFB2O60825 505 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 CCDC62Q6P9F0 684 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 CHST3Q7LGC8 479 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 GABPB2Q8TAK5 448 aaPredicted RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 GAS8O95995 478 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 TRMT2AQ8IZ69 625 aaKnown RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 TRIM37O94972 964 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 MBD4O95243 580 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 ZNF174Q15697 407 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 MAP3K21Q5TCX8 1036 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 ARMC9Q7Z3E5 817 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 MCUR1Q96AQ8 359 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 CCDC97Q96F63 343 aaPredicted RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 MYCBPQ99417 103 aaPredicted RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 STAP2Q9UGK3 403 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 KCNG1Q9UIX4 513 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 PPP2R2CQ9Y2T4 447 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 YTHDC2Q9H6S0 1430 aaKnown RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 IKBKBO14920 756 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 PARP10Q53GL7 1025 aa11.95□□□□□ -0.5
SEC22B-201ENST00000578049 IFIH1Q9BYX4 1025 aaKnown RBP11.95□□□□□ -0.5
SEC22B-201ENST00000578049 DKC1O60832 514 aaKnown RBP eCLIP11.94□□□□□ -0.5
SEC22B-201ENST00000578049 FAM169AQ9Y6X4 670 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
SEC22B-201ENST00000578049 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
SEC22B-201ENST00000578049 MCTP2Q6DN12 878 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 C17orf53Q8N3J3 647 aaPredicted RBP11.94□□□□□ -0.5
SEC22B-201ENST00000578049 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.94□□□□□ -0.5
SEC22B-201ENST00000578049 IQSEC3Q9UPP2 1182 aaPredicted RBP11.94□□□□□ -0.5
SEC22B-201ENST00000578049 ST5P78524 1137 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 CUL4AQ13619 759 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 KRT71Q3SY84 523 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 CEP85LQ5SZL2 805 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 NBPF14Q5TI25 921 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 FAM173BQ6P4H8 233 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 PLXNC1O60486 1568 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 SPATA31E1Q6ZUB1 1445 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 H7C1D1 291 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 GPAA1O43292 621 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 EXOC7Q9UPT5 735 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 MAP3K19Q56UN5 1328 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 PTPRTO14522 1441 aa11.94□□□□□ -0.5
SEC22B-201ENST00000578049 CCDC151A5D8V7 595 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms