RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 DHX36Q9H2U1 1008 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 BSDC1Q9NW68 430 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 LMCD1Q9NZU5 365 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SLC8A2Q9UPR5 921 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 EDC4Q6P2E9 1401 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ATP7AQ04656 1500 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CHMP2AO43633 222 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 RPL13P26373 211 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 HOXD11P31277 338 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 COPB2P35606 906 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CTSWP56202 376 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 GUCY1B3Q02153 619 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 TFCP2Q12800 502 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 EZH2Q15910 746 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CCDC14Q49A88 953 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 C9orf131Q5VYM1 1079 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 PODNQ7Z5L7 613 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ARHGEF25Q86VW2 580 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SMC1BQ8NDV3 1235 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CNNM3Q8NE01 707 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 DEPTORQ8TB45 409 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 TTC12Q9H892 705 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 LGR6Q9HBX8 967 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 RMND1Q9NWS8 449 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 STIM2Q9P246 746 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 NARFQ9UHQ1 456 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CCPG1Q9ULG6 757 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ZBTB1Q9Y2K1 713 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SBNO2Q9Y2G9 1366 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 A0A0G2JLW4 131 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 GOLGA6L10A6NI86 522 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 GCOM1H8Y6P7 765 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 DDX39AO00148 427 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ASNSP08243 561 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 POLR2MP0CAP2 368 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 STAT6P42226 847 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 BTDP43251 543 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ATP8B2P98198 1209 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 GRAPQ13588 217 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 TFDP1Q14186 410 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SKIDA1Q1XH10 827 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 METTL23Q86XA0 190 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 YAF2Q8IY57 180 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 GRAPLQ8TC17 118 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 GANCQ8TET4 914 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ARHGAP45Q92619 1136 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CCDC102AQ96A19 550 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CDHR1Q96JP9 859 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 PARK7Q99497 189 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 BRIP1Q9BX63 1249 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SUGCTQ9HAC7 445 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ZNF277Q9NRM2 450 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 HOXC10Q9NYD6 342 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SRP68Q9UHB9 627 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 POLIQ9UNA4 740 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ZFYVE9O95405 1425 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 EFCAB6Q5THR3 1501 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 STAMBPO95630 424 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 PCCAP05165 728 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 MYL3P08590 195 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CCDC192P0DO97 292 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 PRKCSHP14314 528 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 FERP16591 822 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 IGBP1P78318 339 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SLFN5Q08AF3 891 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 RC3H1Q5TC82 1133 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 IQCEQ6IPM2 695 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CCDC91Q7Z6B0 441 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CCDC83Q8IWF9 413 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ZBTB38Q8NAP3 1195 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SPATA5Q8NB90 893 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 PROCA1Q8NCQ7 364 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 OTUD5Q96G74 571 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 XAGE2Q96GT9 111 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 NACC1Q96RE7 527 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 UPF3BQ9BZI7 483 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ARGLU1Q9NWB6 273 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ARPP21Q9UBL0 812 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 H0YCG3 227 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 PRPF6O94906 941 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 OATP04181 439 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 SLFN13Q68D06 897 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 TTC30AQ86WT1 665 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 FOXP4Q8IVH2 680 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 GABPB2Q8TAK5 448 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 KIAA1524Q8TCG1 905 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 PRPF31Q8WWY3 499 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 WRNIP1Q96S55 665 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 HTATIP2Q9BUP3 242 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 SCAND2PQ9GZW5 306 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 SWAP70Q9UH65 585 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 ZNRF3Q9ULT6 936 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 DAPK3O43293 454 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 SH3BP5O60239 455 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 USO1O60763 962 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 KRT19P08727 400 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 ADCY7P51828 1080 aa3.3□□□□□ -1.88
SMCHD1-203ENST00000577880 TIMM10P62072 90 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms