RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LIG1P18858 919 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 ATP5JP18859 108 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 GUCY1B3Q02153 619 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 GLIPR1L2Q4G1C9 344 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 TMEM87AQ8NBN3 555 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 TPCN2Q8NHX9 752 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 C7orf43Q8WVR3 580 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 SREK1Q8WXA9 508 aaKnown RBP6.29□□□□□ -1.4
VAPA-203ENST00000577539 DACT1Q9NYF0 836 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 HMG20BQ9P0W2 317 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 RIPOR2Q9Y4F9 1068 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 LRRC37A3O60309 1634 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 CACNA1FO60840 1977 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 SKOR1P84550 965 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 MAP3K11Q16584 847 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 UVSSAQ2YD98 709 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 MCMDC2Q4G0Z9 681 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 CHST3Q7LGC8 479 aa6.29□□□□□ -1.4
VAPA-203ENST00000577539 CWC25Q9NXE8 425 aaPredicted RBP6.29□□□□□ -1.4
VAPA-203ENST00000577539 LTN1O94822 1766 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 UTYO14607 1347 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 A0A1W2PRU2 124 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 ZBTB39O15060 712 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 ZNF500O60304 480 aaPredicted RBP6.28□□□□□ -1.4
VAPA-203ENST00000577539 ZPR1O75312 459 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 IFIT1P09914 478 aaKnown RBP6.28□□□□□ -1.4
VAPA-203ENST00000577539 TOB2Q14106 344 aaPredicted RBP6.28□□□□□ -1.4
VAPA-203ENST00000577539 PLBD2Q8NHP8 589 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 QTRT2Q9H974 415 aaKnown RBP6.28□□□□□ -1.4
VAPA-203ENST00000577539 IQSEC3Q9UPP2 1182 aaPredicted RBP6.28□□□□□ -1.4
VAPA-203ENST00000577539 SUGT1Q9Y2Z0 365 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 HEG1Q9ULI3 1381 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 NR1I2O75469 434 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 MCM5P33992 734 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 EVA1CP58658 441 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 NBPF14Q5TI25 921 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 SLC4A9Q96Q91 983 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 SCAND2PQ9GZW5 306 aaPredicted RBP6.28□□□□□ -1.4
VAPA-203ENST00000577539 NOD1Q9Y239 953 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 TMEM94Q12767 1356 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 CYP21A2P08686 494 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 HAND2P61296 217 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 SASS6Q6UVJ0 657 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 ANKRD13AQ8IZ07 590 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 PSMD1Q99460 953 aa6.28□□□□□ -1.4
VAPA-203ENST00000577539 C1orf167Q5SNV9 1468 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 KDM6AO15550 1401 aaPredicted RBP6.27□□□□□ -1.41
VAPA-203ENST00000577539 RRP9O43818 475 aaKnown RBP6.27□□□□□ -1.41
VAPA-203ENST00000577539 GRM5P41594 1212 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 HSPA2P54652 639 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 APOBRQ0VD83 1088 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 LRRC24Q50LG9 513 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 RAB11FIP4Q86YS3 637 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 KBTBD3Q8NAB2 608 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 ZCRB1Q8TBF4 217 aaKnown RBP6.27□□□□□ -1.41
VAPA-203ENST00000577539 ZNF516Q92618 1163 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 PAG1Q9NWQ8 432 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 CTSHP09668 335 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 RFX5P48382 616 aaPredicted RBP6.27□□□□□ -1.41
VAPA-203ENST00000577539 CCDC57Q2TAC2 916 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 HSP90AB3PQ58FF7 597 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 LUZP1Q86V48 1076 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 KCNB2Q92953 911 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 NCOA5Q9HCD5 579 aaKnown RBP6.27□□□□□ -1.41
VAPA-203ENST00000577539 RGPD2P0DJD1 1756 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 TCHHQ07283 1943 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 LILRA1O75019 489 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 CTHP32929 405 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 ATP1A2P50993 1020 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 FANCCQ00597 558 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 TYRO3Q06418 890 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 NBPF10Q6P3W6 841 aaKnown RBP6.27□□□□□ -1.41
VAPA-203ENST00000577539 NBPF15Q8N660 670 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 LEO1Q8WVC0 666 aaPredicted RBP6.27□□□□□ -1.41
VAPA-203ENST00000577539 KLRG1Q96E93 195 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 HAUS7Q99871 368 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 PUS3Q9BZE2 481 aaKnown RBP6.27□□□□□ -1.41
VAPA-203ENST00000577539 TRIM5Q9C035 493 aa6.27□□□□□ -1.41
VAPA-203ENST00000577539 A0A1B0GUL7 405 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 GOLGA6L6A8MZA4 724 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 GPTP24298 496 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 ANO6Q4KMQ2 910 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 TTC39AQ5SRH9 613 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 TRIM50Q86XT4 487 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 ARMC2Q8NEN0 867 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 GTF3C6Q969F1 213 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 MED23Q9ULK4 1368 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 MEGF6O75095 1541 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 IL15P40933 162 aaPredicted RBP6.26□□□□□ -1.41
VAPA-203ENST00000577539 NOLC1Q14978 699 aaKnown RBP eCLIP6.26□□□□□ -1.41
VAPA-203ENST00000577539 CCDC158Q5M9N0 1113 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 TTLL5Q6EMB2 1281 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 MKNK1Q9BUB5 465 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 KIF3AQ9Y496 699 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 FAM205CA6NFA0 338 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 EYA2O00167 538 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 CLSTN1O94985 981 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 ADH1BP00325 375 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 COPS2P61201 443 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms