RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 POLR3DP05423 398 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 NOL9Q5SY16 702 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SPRYD7Q5W111 196 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 FOXP4Q8IVH2 680 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SDR42E1Q8WUS8 393 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 WNK4Q96J92 1243 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 BEGAINQ9BUH8 593 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 EHD4Q9H223 541 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 ELP3Q9H9T3 547 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 DCP1AQ9NPI6 582 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 MCM9Q9NXL9 1143 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 TAOK2Q9UL54 1235 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 DOCK1Q14185 1865 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 HIP1O00291 1037 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 CTNND1O60716 968 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 INPP5BP32019 993 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SREBF2Q12772 1141 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 GIMAP6Q6P9H5 292 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 METTL16Q86W50 562 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 STRBPQ96SI9 672 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 PICK1Q9NRD5 415 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SERPINB13Q9UIV8 391 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SNCAIPQ9Y6H5 919 aa15.25■□□□□ 0.03
CDK5RAP3-203ENST00000577442 LAMB1P07942 1786 aa15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SPDYE5A6NIY4 337 aa15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 M0R2C6 588 aa15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 KIF23Q02241 960 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SCYL3Q8IZE3 742 aa15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 ZKSCAN4Q969J2 545 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 OPTNQ96CV9 577 aa15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
CDK5RAP3-203ENST00000577442 MYH8P13535 1937 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 ATAD5Q96QE3 1844 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 PHF20L1A8MW92 1017 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 CA12O43570 354 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 PRKAB2O43741 272 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 PPATQ06203 517 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 PPIL2Q13356 520 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 NACAP1Q9BZK3 213 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 DIAPH3Q9NSV4 1193 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 GINM1Q9NU53 330 aa15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 ARPP21Q9UBL0 812 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-203ENST00000577442 FAM196BA6NMK8 535 aa15.22■□□□□ 0.03
CDK5RAP3-203ENST00000577442 MFAP1P55081 439 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-203ENST00000577442 INHBEP58166 350 aa15.22■□□□□ 0.03
CDK5RAP3-203ENST00000577442 MKRN3Q13064 507 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SLC4A8Q2Y0W8 1093 aa15.22■□□□□ 0.03
CDK5RAP3-203ENST00000577442 OTUD5Q96G74 571 aa15.22■□□□□ 0.03
CDK5RAP3-203ENST00000577442 WBP1LQ9NX94 342 aa15.22■□□□□ 0.03
CDK5RAP3-203ENST00000577442 GSG1L2A8MUP6 293 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 APPP05067 770 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 HSPA1AP0DMV8 641 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 HSPA1BP0DMV9 641 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 GSPT1P15170 499 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SDSP20132 328 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 CAP2P40123 477 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 TDO2P48775 406 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 GTF2A2P52657 109 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 NMIQ13287 307 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 MCMDC2Q4G0Z9 681 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 ZIC5Q96T25 663 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SEC62Q99442 399 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 TBC1D2Q9BYX2 928 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 DNAJC18Q9H819 358 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
CDK5RAP3-203ENST00000577442 A0A0D9SFI3 127 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 PATL2C9JE40 543 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 USP17L12C9JPN9 530 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 USP17L21D6R901 530 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ASNSP08243 561 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 GJA5P36382 358 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 PLCD1P51178 756 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 SNAPC2Q13487 334 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 SBK1Q52WX2 424 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 C12orf60Q5U649 245 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 FAM227BQ96M60 508 aa15.2■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CCDC171Q6TFL3 1326 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 SLURP2P0DP57 97 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CETPP11597 493 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 PTPRAP18433 802 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 TM4SF4P48230 202 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 GABPAQ06546 454 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 OTUD7BQ6GQQ9 843 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 NAPBQ9H115 298 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 EPB41L4AQ9HCS5 686 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 SAGE1Q9NXZ1 904 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 KCNH4Q9UQ05 1017 aa15.19■□□□□ 0.02
CDK5RAP3-203ENST00000577442 RAD50Q92878 1312 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CCL15-CCL14A0A0B4J2E2 113 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CXCL11O14625 94 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 IRF6O14896 467 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ALDH1A1P00352 501 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CYP2D6P10635 497 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 SHMT1P34896 483 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms