RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 MGAMO43451 1857 aa16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 PTPRFP10586 1907 aa16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 CAPN2P17655 700 aa16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 GJA8P48165 433 aa16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 PRKCZQ05513 592 aa16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
ATP2A3-215ENST00000576957 TRIM75PA6NK02 468 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 IGSF3O75054 1194 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 BCAR3O75815 825 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 CCL5P13501 91 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 MCAMP43121 646 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 PI16Q6UXB8 463 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 TBC1D9Q6ZT07 1266 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 PROCA1Q8NCQ7 364 aaPredicted RBP16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 SMCR8Q8TEV9 937 aaPredicted RBP16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 SHISA4Q96DD7 197 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 GPR108Q9NPR9 543 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 RAI14Q9P0K7 980 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 BIN2Q9UBW5 565 aaPredicted RBP16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 PNMA3Q9UL41 463 aa16.21■□□□□ 0.19
ATP2A3-215ENST00000576957 SLURP2P0DP57 97 aa16.2■□□□□ 0.18
ATP2A3-215ENST00000576957 PXYLP1Q8TE99 480 aa16.2■□□□□ 0.18
ATP2A3-215ENST00000576957 NOL10Q9BSC4 688 aaKnown RBP16.2■□□□□ 0.18
ATP2A3-215ENST00000576957 RNF208Q9H0X6 261 aa16.2■□□□□ 0.18
ATP2A3-215ENST00000576957 LRP2BPQ9P2M1 347 aa16.2■□□□□ 0.18
ATP2A3-215ENST00000576957 HERC5Q9UII4 1024 aaKnown RBP16.2■□□□□ 0.18
ATP2A3-215ENST00000576957 GABRQQ9UN88 632 aa16.2■□□□□ 0.18
ATP2A3-215ENST00000576957 TNPO2O14787 897 aaKnown RBP16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 FLT3LGP49771 235 aa16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 IRF5Q13568 498 aa16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 NBR1Q14596 966 aa16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 UBE2Q1Q7Z7E8 422 aa16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 TEX11Q8IYF3 940 aa16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 ZNF280CQ8ND82 737 aa16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 CLUAP1Q96AJ1 413 aa16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 DHX36Q9H2U1 1008 aaKnown RBP16.19■□□□□ 0.18
ATP2A3-215ENST00000576957 ADCY3O60266 1144 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 BAG3O95817 575 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 PLCG2P16885 1265 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 CAP2P40123 477 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 PABPC4Q13310 644 aaKnown RBP eCLIP16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 POLA2Q14181 598 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 FAM110CQ1W6H9 321 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 CCDC158Q5M9N0 1113 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 HTATIP2Q9BUP3 242 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 PI4KBQ9UBF8 816 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 TNNQ9UQP3 1299 aa16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 COLQQ9Y215 455 aaPredicted RBP16.18■□□□□ 0.18
ATP2A3-215ENST00000576957 FAM196BA6NMK8 535 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 USP17L5A8MUK1 530 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 H0YGN5 161 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 FXR1P51114 621 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 PPP4CP60510 307 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 SPP2Q13103 211 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 TNNI3KQ59H18 835 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 SH3D19Q5HYK7 790 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 TTC39AQ5SRH9 613 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 TREML2Q5T2D2 321 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 CCDC84Q86UT8 332 aaPredicted RBP16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 TMEM57Q8N5G2 664 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 U2AF1L4Q8WU68 220 aaKnown RBP16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 COA7Q96BR5 231 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 ZNF512BQ96KM6 892 aaPredicted RBP16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 AS3MTQ9HBK9 375 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 FPGT-TNNI3KV9GXZ4 949 aa16.17■□□□□ 0.18
ATP2A3-215ENST00000576957 SGPL1O95470 568 aa16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 ATP8B2P98198 1209 aa16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 PDE3AQ14432 1141 aa16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 NAA16Q6N069 864 aaPredicted RBP16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 ANKRD13CQ8N6S4 541 aa16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 DPF3Q92784 378 aa16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 UNC93B1Q9H1C4 597 aa16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 DAXXQ9UER7 740 aaPredicted RBP16.16■□□□□ 0.18
ATP2A3-215ENST00000576957 LOC285556D6RIA3 1793 aa16.15■□□□□ 0.18
ATP2A3-215ENST00000576957 OS9Q13438 667 aaPredicted RBP16.15■□□□□ 0.18
ATP2A3-215ENST00000576957 METTL16Q86W50 562 aaKnown RBP16.15■□□□□ 0.18
ATP2A3-215ENST00000576957 FOXP4Q8IVH2 680 aaPredicted RBP16.15■□□□□ 0.18
ATP2A3-215ENST00000576957 WDR18Q9BV38 432 aa16.15■□□□□ 0.18
ATP2A3-215ENST00000576957 GINM1Q9NU53 330 aa16.15■□□□□ 0.18
ATP2A3-215ENST00000576957 AATFQ9NY61 560 aaKnown RBP eCLIP16.15■□□□□ 0.183e-6■■■■■ 29.5
ATP2A3-215ENST00000576957 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
ATP2A3-215ENST00000576957 SURF6O75683 361 aaKnown RBP16.14■□□□□ 0.17
ATP2A3-215ENST00000576957 INHAP05111 366 aa16.14■□□□□ 0.17
ATP2A3-215ENST00000576957 ASNSP08243 561 aa16.14■□□□□ 0.17
ATP2A3-215ENST00000576957 ELNP15502 786 aa16.14■□□□□ 0.17
ATP2A3-215ENST00000576957 HMGCS2P54868 508 aa16.14■□□□□ 0.17
ATP2A3-215ENST00000576957 RRP1BQ14684 758 aaKnown RBP16.14■□□□□ 0.17
ATP2A3-215ENST00000576957 DBNDD2Q9BQY9 259 aa16.14■□□□□ 0.17
ATP2A3-215ENST00000576957 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
ATP2A3-215ENST00000576957 MAST2Q6P0Q8 1798 aa16.13■□□□□ 0.17
ATP2A3-215ENST00000576957 FARP2O94887 1054 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms