RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 RPTORQ8N122 1335 aa13.26□□□□□ -0.29
CALCOCO2-228ENST00000576582 LRCH3Q96II8 777 aa13.26□□□□□ -0.29
CALCOCO2-228ENST00000576582 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
CALCOCO2-228ENST00000576582 HMX1Q9NP08 348 aaPredicted RBP13.26□□□□□ -0.29
CALCOCO2-228ENST00000576582 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
CALCOCO2-228ENST00000576582 ABCF2Q9UG63 623 aa13.26□□□□□ -0.29
CALCOCO2-228ENST00000576582 COL6A3P12111 3177 aa13.26□□□□□ -0.29
CALCOCO2-228ENST00000576582 LDHCP07864 332 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 BTDP43251 543 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 SPP2Q13103 211 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 PICALMQ13492 652 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 TREML2Q5T2D2 321 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 ZNF280CQ8ND82 737 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 COPRSQ9NQ92 184 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 GJD2Q9UKL4 321 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 AKAP2Q9Y2D5 859 aa13.25□□□□□ -0.29
CALCOCO2-228ENST00000576582 MROH7-TTC4A0A0A0MT08 1334 aa13.24□□□□□ -0.29
CALCOCO2-228ENST00000576582 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO2-228ENST00000576582 TIMM10P62072 90 aa13.24□□□□□ -0.29
CALCOCO2-228ENST00000576582 GSTO1P78417 241 aa13.24□□□□□ -0.29
CALCOCO2-228ENST00000576582 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO2-228ENST00000576582 TRMT2AQ8IZ69 625 aaKnown RBP13.24□□□□□ -0.29
CALCOCO2-228ENST00000576582 DIS3LQ8TF46 1054 aaKnown RBP13.24□□□□□ -0.29
CALCOCO2-228ENST00000576582 DOCK2Q92608 1830 aa13.24□□□□□ -0.29
CALCOCO2-228ENST00000576582 USP17L5A8MUK1 530 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 ADORA1P30542 326 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 CAP2P40123 477 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 RHBDL3P58872 404 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 MECOMQ03112 1051 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 MVPQ14764 893 aaKnown RBP13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 SH3D19Q5HYK7 790 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 C7orf61Q8IZ16 206 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 DEFB123Q8N688 67 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 ASCC2Q9H1I8 757 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 C11orf49Q9H6J7 331 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 AS3MTQ9HBK9 375 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 SMC4Q9NTJ3 1288 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 OGDHLQ9ULD0 1010 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 DOCK3Q8IZD9 2030 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 PTPRFP10586 1907 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 MYH2Q9UKX2 1941 aa13.23□□□□□ -0.29
CALCOCO2-228ENST00000576582 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 XRCC5P13010 732 aaKnown RBP13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 HMGCS2P54868 508 aa13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 CCDC84Q86UT8 332 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 TRMT44Q8IYL2 757 aaKnown RBP13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 MORF4L1Q9UBU8 362 aa13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 STXBP5LQ9Y2K9 1186 aa13.22□□□□□ -0.29
CALCOCO2-228ENST00000576582 TDHQ8IZJ6 230 aa13.21□□□□□ -0.29
CALCOCO2-228ENST00000576582 XAGE2Q96GT9 111 aa13.21□□□□□ -0.29
CALCOCO2-228ENST00000576582 WDR18Q9BV38 432 aa13.21□□□□□ -0.29
CALCOCO2-228ENST00000576582 ZMYND8Q9ULU4 1186 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO2-228ENST00000576582 PA2G4Q9UQ80 394 aaKnown RBP13.21□□□□□ -0.29
CALCOCO2-228ENST00000576582 COL2A1P02458 1487 aaPredicted RBP13.21□□□□□ -0.3
CALCOCO2-228ENST00000576582 DOCK1Q14185 1865 aa13.21□□□□□ -0.3
CALCOCO2-228ENST00000576582 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 A0A1B0GUL7 405 aa13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 MAGEA10P43363 369 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 IRX3P78415 501 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 NSUN4Q96CB9 384 aaKnown RBP13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 NUDT12Q9BQG2 462 aa13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 DHX36Q9H2U1 1008 aaKnown RBP13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 PI4KBQ9UBF8 816 aa13.2□□□□□ -0.3
CALCOCO2-228ENST00000576582 C19orf81C9J6K1 198 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 BACE1P56817 501 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 TRIM32Q13049 653 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 MTX1Q13505 466 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 ZNF384Q8TF68 577 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 SOCS4Q8WXH5 440 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 TRIB2Q92519 343 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 GINM1Q9NU53 330 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 MTMR10Q9NXD2 777 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 TMOD4Q9NZQ9 345 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
CALCOCO2-228ENST00000576582 FAM196BA6NMK8 535 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 ASNSP08243 561 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 SYN1P17600 705 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 CYP2B6P20813 491 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 MAPK4P31152 587 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 TFCP2Q12800 502 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 GORABQ5T7V8 394 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 FOXP4Q8IVH2 680 aaPredicted RBP13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 GTF3C2Q8WUA4 911 aaPredicted RBP13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 NEUROD6Q96NK8 337 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 P2RX7Q99572 595 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms