RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 ATG9AQ7Z3C6 839 aa15.17■□□□□ 0.02
PRPF8-208ENST00000573716 SLF2Q8IX21 1173 aa15.17■□□□□ 0.02
PRPF8-208ENST00000573716 ZGPATQ8N5A5 531 aaKnown RBP15.17■□□□□ 0.02
PRPF8-208ENST00000573716 PROCA1Q8NCQ7 364 aaPredicted RBP15.17■□□□□ 0.02
PRPF8-208ENST00000573716 COL25A1Q9BXS0 654 aaPredicted RBP15.17■□□□□ 0.02
PRPF8-208ENST00000573716 USP44Q9H0E7 712 aa15.17■□□□□ 0.02
PRPF8-208ENST00000573716 RFX7Q2KHR2 1363 aa15.16■□□□□ 0.02
PRPF8-208ENST00000573716 SEMA3EO15041 775 aa15.16■□□□□ 0.02
PRPF8-208ENST00000573716 MDM2Q00987 491 aaPredicted RBP15.16■□□□□ 0.02
PRPF8-208ENST00000573716 MRPL50Q8N5N7 158 aaKnown RBP15.16■□□□□ 0.02
PRPF8-208ENST00000573716 TRIB2Q92519 343 aa15.16■□□□□ 0.02
PRPF8-208ENST00000573716 ASCC2Q9H1I8 757 aaPredicted RBP15.16■□□□□ 0.02
PRPF8-208ENST00000573716 GAKO14976 1311 aa15.16■□□□□ 0.02
PRPF8-208ENST00000573716 PLXNB2O15031 1838 aa15.15■□□□□ 0.02
PRPF8-208ENST00000573716 PRKAR2AP13861 404 aaKnown RBP15.15■□□□□ 0.02
PRPF8-208ENST00000573716 ADORA1P30542 326 aa15.15■□□□□ 0.02
PRPF8-208ENST00000573716 MAP3K10Q02779 954 aa15.15■□□□□ 0.02
PRPF8-208ENST00000573716 ZNF280CQ8ND82 737 aa15.15■□□□□ 0.02
PRPF8-208ENST00000573716 FAM161BQ96MY7 647 aa15.15■□□□□ 0.02
PRPF8-208ENST00000573716 GJD2Q9UKL4 321 aa15.15■□□□□ 0.02
PRPF8-208ENST00000573716 IRX3P78415 501 aaPredicted RBP15.14■□□□□ 0.01
PRPF8-208ENST00000573716 SPTY2D1Q68D10 685 aaPredicted RBP15.14■□□□□ 0.01
PRPF8-208ENST00000573716 CCDC102BQ68D86 513 aa15.14■□□□□ 0.01
PRPF8-208ENST00000573716 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.14■□□□□ 0.01
PRPF8-208ENST00000573716 OGDHLQ9ULD0 1010 aa15.14■□□□□ 0.01
PRPF8-208ENST00000573716 MROH7-TTC4A0A0A0MT08 1334 aa15.14■□□□□ 0.01
PRPF8-208ENST00000573716 PFASO15067 1338 aa15.14■□□□□ 0.01
PRPF8-208ENST00000573716 PTPRCP08575 1304 aa15.14■□□□□ 0.01
PRPF8-208ENST00000573716 PEX10O60683 326 aa15.13■□□□□ 0.01
PRPF8-208ENST00000573716 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
PRPF8-208ENST00000573716 CCAR1Q8IX12 1150 aaKnown RBP15.13■□□□□ 0.01
PRPF8-208ENST00000573716 OSBPL5Q9H0X9 879 aaPredicted RBP15.13■□□□□ 0.01
PRPF8-208ENST00000573716 USP17L5A8MUK1 530 aa15.12■□□□□ 0.01
PRPF8-208ENST00000573716 CIAO1O76071 339 aa15.12■□□□□ 0.01
PRPF8-208ENST00000573716 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
PRPF8-208ENST00000573716 ZKSCAN1P17029 563 aaPredicted RBP15.12■□□□□ 0.01
PRPF8-208ENST00000573716 PDE3AQ14432 1141 aa15.12■□□□□ 0.01
PRPF8-208ENST00000573716 LRRC26Q2I0M4 334 aa15.12■□□□□ 0.01
PRPF8-208ENST00000573716 NUDT12Q9BQG2 462 aa15.12■□□□□ 0.01
PRPF8-208ENST00000573716 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
PRPF8-208ENST00000573716 TBC1D12O60347 775 aa15.11■□□□□ 0.01
PRPF8-208ENST00000573716 IL15P40933 162 aaPredicted RBP15.11■□□□□ 0.01
PRPF8-208ENST00000573716 MECOMQ03112 1051 aa15.11■□□□□ 0.01
PRPF8-208ENST00000573716 MTMR2Q13614 643 aa15.11■□□□□ 0.01
PRPF8-208ENST00000573716 ERICH6Q7L0X2 663 aa15.11■□□□□ 0.01
PRPF8-208ENST00000573716 LBHD1Q9BQE6 289 aaPredicted RBP15.11■□□□□ 0.01
PRPF8-208ENST00000573716 AS3MTQ9HBK9 375 aa15.11■□□□□ 0.01
PRPF8-208ENST00000573716 CWC22Q9HCG8 908 aaKnown RBP15.11■□□□□ 0.01
PRPF8-208ENST00000573716 TMOD4Q9NZQ9 345 aa15.11■□□□□ 0.01
PRPF8-208ENST00000573716 MORF4L1Q9UBU8 362 aa15.11■□□□□ 0.01
PRPF8-208ENST00000573716 CCND3P30281 292 aaPredicted RBP15.1■□□□□ 0.01
PRPF8-208ENST00000573716 CAP2P40123 477 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 RHBDL3P58872 404 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 TIMM10P62072 90 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 CACNB2Q08289 660 aaPredicted RBP15.1■□□□□ 0.01
PRPF8-208ENST00000573716 MAP3K21Q5TCX8 1036 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 GPRC5AQ8NFJ5 357 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 SSH1Q8WYL5 1049 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 FAM163AQ96GL9 167 aaPredicted RBP15.1■□□□□ 0.01
PRPF8-208ENST00000573716 GUCD1Q96NT3 240 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
PRPF8-208ENST00000573716 TBC1D2Q9BYX2 928 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 FBXO3Q9UK99 471 aa15.1■□□□□ 0.01
PRPF8-208ENST00000573716 GPR75-ASB3A0A0A6YYF3 556 aa15.09■□□□□ 0.01
PRPF8-208ENST00000573716 RRP1BQ14684 758 aaKnown RBP15.09■□□□□ 0.01
PRPF8-208ENST00000573716 CCL14Q16627 93 aa15.09■□□□□ 0.01
PRPF8-208ENST00000573716 TEX11Q8IYF3 940 aa15.09■□□□□ 0.01
PRPF8-208ENST00000573716 SOCS4Q8WXH5 440 aa15.09■□□□□ 0.01
PRPF8-208ENST00000573716 PAGR1Q9BTK6 254 aa15.09■□□□□ 0.01
PRPF8-208ENST00000573716 TXNRD2Q9NNW7 524 aa15.09■□□□□ 0.01
PRPF8-208ENST00000573716 UNC80Q8N2C7 3258 aa15.09■□□□□ 0.01
PRPF8-208ENST00000573716 LDHCP07864 332 aa15.08■□□□□ 0
PRPF8-208ENST00000573716 COL6A1P12109 1028 aa15.08■□□□□ 0
PRPF8-208ENST00000573716 XRCC5P13010 732 aaKnown RBP15.08■□□□□ 0
PRPF8-208ENST00000573716 HERVK_113P62684 666 aa15.08■□□□□ 0
PRPF8-208ENST00000573716 GSTO1P78417 241 aa15.08■□□□□ 0
PRPF8-208ENST00000573716 SH3D19Q5HYK7 790 aa15.08■□□□□ 0
PRPF8-208ENST00000573716 TRMT44Q8IYL2 757 aaKnown RBP15.08■□□□□ 0
PRPF8-208ENST00000573716 RAI14Q9P0K7 980 aa15.08■□□□□ 0
PRPF8-208ENST00000573716 FRMPD3Q5JV73 1810 aa15.08■□□□□ 0
PRPF8-208ENST00000573716 ZBTB22O15209 634 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 MAPK4P31152 587 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 RGS2P41220 211 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 ATN1P54259 1190 aaPredicted RBP15.07■□□□□ 0
PRPF8-208ENST00000573716 BACE1P56817 501 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 GORABQ5T7V8 394 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 ZNF697Q5TEC3 545 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 TBC1D9Q6ZT07 1266 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 ZNF384Q8TF68 577 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 XAGE2Q96GT9 111 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 NEUROD6Q96NK8 337 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 NOL10Q9BSC4 688 aaKnown RBP15.07■□□□□ 0
PRPF8-208ENST00000573716 TRIM34Q9BYJ4 488 aa15.07■□□□□ 0
PRPF8-208ENST00000573716 SENP6Q9GZR1 1112 aaPredicted RBP15.07■□□□□ 0
PRPF8-208ENST00000573716 PDS5AQ29RF7 1337 aaKnown RBP15.07■□□□□ 0
PRPF8-208ENST00000573716 A0A1B0GUL7 405 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 POTEB2H3BUK9 544 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 MVPQ14764 893 aaKnown RBP15.06■□□□□ 0
PRPF8-208ENST00000573716 WDR78Q5VTH9 848 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms