RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 JRKLQ9Y4A0 524 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 COL11A2P13942 1736 aaPredicted RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 CDHR2Q9BYE9 1310 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 GOLGA6L9A6NEM1 432 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 KINO60870 393 aaKnown RBP6.26□□□□□ -1.41
LINC01541-202ENST00000568095 STARD3NLO95772 234 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 NLRP12P59046 1061 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 APOBRQ0VD83 1088 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 HLFQ16534 295 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 DPCR1Q3MIW9 517 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 NOM1Q5C9Z4 860 aaKnown RBP6.26□□□□□ -1.41
LINC01541-202ENST00000568095 GIGYF2Q6Y7W6 1299 aaKnown RBP6.26□□□□□ -1.41
LINC01541-202ENST00000568095 GOLGA6L1Q8N7Z2 621 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 SYTL4Q96C24 671 aaPredicted RBP6.26□□□□□ -1.41
LINC01541-202ENST00000568095 FAM227BQ96M60 508 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 MYCBPQ99417 103 aaPredicted RBP6.26□□□□□ -1.41
LINC01541-202ENST00000568095 AGXT2Q9BYV1 514 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 RTEL1Q9NZ71 1219 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 KIF13BQ9NQT8 1826 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 MYO5AQ9Y4I1 1855 aaKnown RBP6.26□□□□□ -1.41
LINC01541-202ENST00000568095 HAX1O00165 279 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 ZSCAN12O43309 604 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 CTDNEP1O95476 244 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 TCIRG1Q13488 830 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 KRT32Q14532 448 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 CCDC73Q6ZRK6 1079 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 VSTM4Q8IW00 320 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 USP28Q96RU2 1077 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 CCDC87Q9NVE4 849 aa6.26□□□□□ -1.41
LINC01541-202ENST00000568095 A0A087WWV3 80 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 EIF3CLB5ME19 914 aaKnown RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 ARHGAP6O43182 974 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 NRDCO43847 1150 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 TAF5LO75529 589 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 SMC2O95347 1197 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 TUBB4BP68371 445 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 FANCCQ00597 558 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 SCRN1Q12765 414 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 AIMP1Q12904 312 aaKnown RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 TTC31Q49AM3 519 aaPredicted RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 RIC3Q7Z5B4 369 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 NSUN7Q8NE18 718 aaKnown RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 MRPS27Q92552 414 aaKnown RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 CCDC102AQ96A19 550 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 ZNF396Q96N95 335 aaPredicted RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 EIF3CQ99613 913 aaKnown RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 EPC1Q9H2F5 836 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 ANKZF1Q9H8Y5 726 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 L1RE1Q9UN81 338 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 PPP2R2CQ9Y2T4 447 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 A0A0D9SFI3 127 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 URI1O94763 535 aaPredicted RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 MEX3CQ5U5Q3 659 aaKnown RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 ERC1Q8IUD2 1116 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 FSIP1Q8NA03 581 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 PPM1EQ8WY54 764 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 GOLGA1Q92805 767 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 SECISBP2LQ93073 1101 aaKnown RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 CCDC34Q96HJ3 373 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 WDR24Q96S15 920 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 LRRC4BQ9NT99 713 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 TUBE1Q9UJT0 475 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 PCDHA7Q9UN72 937 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 RTL9Q8NET4 1388 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 ZNF609O15014 1411 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 CSF1RP07333 972 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 LMAN1P49257 510 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 MFSD10Q14728 455 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 ZNF772Q68DY9 489 aaPredicted RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 LRRC31Q6UY01 552 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 NLRP10Q86W26 655 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 HOMER1Q86YM7 354 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 CLASRPQ8N2M8 674 aaKnown RBP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 FBXL16Q8N461 479 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 DDX11Q96FC9 970 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 GPATCH3Q96I76 525 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 CEP89Q96ST8 783 aa6.25□□□□□ -1.41
LINC01541-202ENST00000568095 FTOQ9C0B1 505 aaKnown RBP eCLIP6.25□□□□□ -1.41
LINC01541-202ENST00000568095 FAM237AA0A1B0GTK4 181 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 PCCAP05165 728 aaPredicted RBP6.24□□□□□ -1.41
LINC01541-202ENST00000568095 ATP6V1AP38606 617 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 PTPN12Q05209 780 aaKnown RBP6.24□□□□□ -1.41
LINC01541-202ENST00000568095 FOXR1Q6PIV2 292 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 LEKR1Q6ZMV7 388 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 HDXQ7Z353 690 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 ZBTB9Q96C00 473 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 COPRSQ9NQ92 184 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 ZNF330Q9Y3S2 320 aaPredicted RBP6.24□□□□□ -1.41
LINC01541-202ENST00000568095 MYH13Q9UKX3 1938 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 LOC102724159A0A0B4J2E5 919 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 POTEB2H3BUK9 544 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 CBFA2T2O43439 604 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 STX10O60499 249 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 NDUFA8P51970 172 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 EVX2Q03828 476 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 TUBB2AQ13885 445 aa6.24□□□□□ -1.41
LINC01541-202ENST00000568095 PWP2Q15269 919 aaKnown RBP6.24□□□□□ -1.41
LINC01541-202ENST00000568095 GORABQ5T7V8 394 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms