RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 ZNF213O14771 459 aa18.42■□□□□ 0.54
SNHG20-204ENST00000566583 POLR3DP05423 398 aaPredicted RBP18.42■□□□□ 0.54
SNHG20-204ENST00000566583 ANAPC15P60006 121 aa18.42■□□□□ 0.54
SNHG20-204ENST00000566583 EAPPQ56P03 285 aaPredicted RBP18.42■□□□□ 0.54
SNHG20-204ENST00000566583 ZNF526Q8TF50 670 aaPredicted RBP18.42■□□□□ 0.54
SNHG20-204ENST00000566583 STAG1Q8WVM7 1258 aa18.42■□□□□ 0.54
SNHG20-204ENST00000566583 DCPSQ96C86 337 aaKnown RBP18.42■□□□□ 0.54
SNHG20-204ENST00000566583 DNAJC18Q9H819 358 aa18.42■□□□□ 0.54
SNHG20-204ENST00000566583 PI4KBQ9UBF8 816 aa18.42■□□□□ 0.54
SNHG20-204ENST00000566583 TAOK2Q9UL54 1235 aa18.42■□□□□ 0.54
SNHG20-204ENST00000566583 SLURP2P0DP57 97 aa18.41■□□□□ 0.54
SNHG20-204ENST00000566583 C16orf86Q6ZW13 317 aa18.41■□□□□ 0.54
SNHG20-204ENST00000566583 LDHDQ86WU2 507 aa18.41■□□□□ 0.54
SNHG20-204ENST00000566583 NKX2-3Q8TAU0 364 aa18.41■□□□□ 0.54
SNHG20-204ENST00000566583 DYNLL2Q96FJ2 89 aa18.41■□□□□ 0.54
SNHG20-204ENST00000566583 E7EWF7 191 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 KIF3CO14782 793 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 TBC1D12O60347 775 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 COL9A3Q14050 684 aaPredicted RBP18.4■□□□□ 0.54
SNHG20-204ENST00000566583 SLC4A8Q2Y0W8 1093 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 ADCK5Q3MIX3 580 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 AKNAD1Q5T1N1 836 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 FOXP4Q8IVH2 680 aaPredicted RBP18.4■□□□□ 0.54
SNHG20-204ENST00000566583 INCENPQ9NQS7 918 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 SERPINB13Q9UIV8 391 aa18.4■□□□□ 0.54
SNHG20-204ENST00000566583 DOCK1Q14185 1865 aa18.39■□□□□ 0.54
SNHG20-204ENST00000566583 NEDD4P46934 1319 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 ADM5C9JUS6 153 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 ORC4O43929 436 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 HLA-DOAP06340 250 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 MCCP23508 829 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 NBPF12Q5TAG4 269 aaPredicted RBP18.39■□□□□ 0.53
SNHG20-204ENST00000566583 DLK2Q6UY11 383 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 KRT26Q7Z3Y9 468 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 AMOTL1Q8IY63 956 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 SLC44A5Q8NCS7 719 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 CSRNP1Q96S65 589 aa18.39■□□□□ 0.53
SNHG20-204ENST00000566583 UPF2Q9HAU5 1272 aaKnown RBP18.39■□□□□ 0.53
SNHG20-204ENST00000566583 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
SNHG20-204ENST00000566583 PCP11498 1178 aaKnown RBP18.38■□□□□ 0.53
SNHG20-204ENST00000566583 SHMT1P34896 483 aa18.38■□□□□ 0.53
SNHG20-204ENST00000566583 CDK8P49336 464 aa18.38■□□□□ 0.53
SNHG20-204ENST00000566583 CDC37L1Q7L3B6 337 aa18.38■□□□□ 0.53
SNHG20-204ENST00000566583 USP48Q86UV5 1035 aa18.38■□□□□ 0.53
SNHG20-204ENST00000566583 SULF1Q8IWU6 871 aa18.38■□□□□ 0.53
SNHG20-204ENST00000566583 ZSCAN29Q8IWY8 852 aaPredicted RBP18.38■□□□□ 0.53
SNHG20-204ENST00000566583 GLIS2Q9BZE0 524 aaPredicted RBP18.38■□□□□ 0.53
SNHG20-204ENST00000566583 GPBP1L1Q9HC44 474 aaPredicted RBP18.38■□□□□ 0.53
SNHG20-204ENST00000566583 HERC5Q9UII4 1024 aaKnown RBP18.38■□□□□ 0.53
SNHG20-204ENST00000566583 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
SNHG20-204ENST00000566583 PRAMEF18Q5VWM3 479 aa18.37■□□□□ 0.53
SNHG20-204ENST00000566583 MAP1SQ66K74 1059 aaPredicted RBP18.37■□□□□ 0.53
SNHG20-204ENST00000566583 TATDN1Q6P1N9 297 aa18.37■□□□□ 0.53
SNHG20-204ENST00000566583 MB21D2Q8IYB1 491 aaPredicted RBP18.37■□□□□ 0.53
SNHG20-204ENST00000566583 TM6SF1Q9BZW5 370 aa18.37■□□□□ 0.53
SNHG20-204ENST00000566583 SWAP70Q9UH65 585 aa18.37■□□□□ 0.53
SNHG20-204ENST00000566583 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
SNHG20-204ENST00000566583 FAM196BA6NMK8 535 aa18.36■□□□□ 0.53
SNHG20-204ENST00000566583 RASA1P20936 1047 aa18.36■□□□□ 0.53
SNHG20-204ENST00000566583 KRT32Q14532 448 aa18.36■□□□□ 0.53
SNHG20-204ENST00000566583 MFSD6Q6ZSS7 791 aa18.36■□□□□ 0.53
SNHG20-204ENST00000566583 CDCA5Q96FF9 252 aa18.36■□□□□ 0.53
SNHG20-204ENST00000566583 RNF41Q9H4P4 317 aaPredicted RBP18.36■□□□□ 0.53
SNHG20-204ENST00000566583 PHF20L1A8MW92 1017 aa18.35■□□□□ 0.53
SNHG20-204ENST00000566583 ITGBL1O95965 494 aaPredicted RBP18.35■□□□□ 0.53
SNHG20-204ENST00000566583 SLC3A2P08195 630 aaKnown RBP18.35■□□□□ 0.53
SNHG20-204ENST00000566583 YY1P25490 414 aa18.35■□□□□ 0.53
SNHG20-204ENST00000566583 RRP1BQ14684 758 aaKnown RBP18.35■□□□□ 0.53
SNHG20-204ENST00000566583 CHADLQ6NUI6 762 aa18.35■□□□□ 0.53
SNHG20-204ENST00000566583 ZNF112Q9UJU3 913 aa18.35■□□□□ 0.53
SNHG20-204ENST00000566583 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
SNHG20-204ENST00000566583 PLIN4Q96Q06 1357 aa18.35■□□□□ 0.53
SNHG20-204ENST00000566583 PRDM1O75626 825 aa18.34■□□□□ 0.53
SNHG20-204ENST00000566583 NT5C2P49902 561 aa18.34■□□□□ 0.53
SNHG20-204ENST00000566583 PDE4BQ07343 736 aa18.34■□□□□ 0.53
SNHG20-204ENST00000566583 STK11IPQ8N1F8 1099 aa18.34■□□□□ 0.53
SNHG20-204ENST00000566583 ZNF784Q8NCA9 323 aaPredicted RBP18.34■□□□□ 0.53
SNHG20-204ENST00000566583 NEK1Q96PY6 1258 aa18.34■□□□□ 0.53
SNHG20-204ENST00000566583 CNNM2Q9H8M5 875 aa18.34■□□□□ 0.53
SNHG20-204ENST00000566583 ZSWIM6Q9HCJ5 1215 aa18.34■□□□□ 0.53
SNHG20-204ENST00000566583 B4E1Z4 1266 aa18.33■□□□□ 0.53
SNHG20-204ENST00000566583 ANTXR2P58335 489 aa18.33■□□□□ 0.53
SNHG20-204ENST00000566583 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.53
SNHG20-204ENST00000566583 SUPT20HL1Q3ZLR7 823 aa18.33■□□□□ 0.53
SNHG20-204ENST00000566583 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.53
SNHG20-204ENST00000566583 MIGA2Q7L4E1 593 aa18.33■□□□□ 0.53
SNHG20-204ENST00000566583 NCOA7Q8NI08 942 aa18.33■□□□□ 0.53
SNHG20-204ENST00000566583 HOOK2Q96ED9 719 aa18.33■□□□□ 0.53
SNHG20-204ENST00000566583 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.53
SNHG20-204ENST00000566583 KRT23Q9C075 422 aa18.33■□□□□ 0.53
SNHG20-204ENST00000566583 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.33■□□□□ 0.535e-49■■■■■ 45
SNHG20-204ENST00000566583 TRAF5O00463 557 aa18.32■□□□□ 0.52
SNHG20-204ENST00000566583 JAG1P78504 1218 aa18.32■□□□□ 0.52
SNHG20-204ENST00000566583 FMR1Q06787 632 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNHG20-204ENST00000566583 CRACR2BQ8N4Y2 399 aaPredicted RBP18.32■□□□□ 0.52
SNHG20-204ENST00000566583 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNHG20-204ENST00000566583 ZNF287Q9HBT7 754 aa18.32■□□□□ 0.52
SNHG20-204ENST00000566583 ZSWIM5Q9P217 1185 aa18.32■□□□□ 0.52
SNHG20-204ENST00000566583 PTPRFP10586 1907 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms