RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NOL10Q9BSC4 688 aaKnown RBP17.88■□□□□ 0.45
FANCA-220ENST00000566409 CHMP4BQ9H444 224 aaKnown RBP17.88■□□□□ 0.45
FANCA-220ENST00000566409 PICK1Q9NRD5 415 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 PTPN22Q9Y2R2 807 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 BRCA2P51587 3418 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 FLT1P17948 1338 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 MYH1P12882 1939 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 A0A0G2JLL6 359 aaPredicted RBP17.87■□□□□ 0.45
FANCA-220ENST00000566409 RAB11FIP3O75154 756 aa17.87■□□□□ 0.45
FANCA-220ENST00000566409 PLCG2P16885 1265 aa17.87■□□□□ 0.45
FANCA-220ENST00000566409 PRRT2Q7Z6L0 340 aaPredicted RBP17.87■□□□□ 0.45
FANCA-220ENST00000566409 MIGA1Q8NAN2 632 aa17.87■□□□□ 0.45
FANCA-220ENST00000566409 ARHGAP39Q9C0H5 1083 aa17.87■□□□□ 0.45
FANCA-220ENST00000566409 EFCC1Q9HA90 598 aa17.87■□□□□ 0.45
FANCA-220ENST00000566409 ADGRA2Q96PE1 1338 aa17.87■□□□□ 0.45
FANCA-220ENST00000566409 KIAA0100Q14667 2235 aaKnown RBP17.87■□□□□ 0.45
FANCA-220ENST00000566409 PDE4DIPQ5VU43 2346 aa17.86■□□□□ 0.45
FANCA-220ENST00000566409 C17orf99Q6UX52 265 aa17.86■□□□□ 0.45
FANCA-220ENST00000566409 METTL16Q86W50 562 aaKnown RBP17.86■□□□□ 0.45
FANCA-220ENST00000566409 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
FANCA-220ENST00000566409 DNAJC18Q9H819 358 aa17.86■□□□□ 0.45
FANCA-220ENST00000566409 PALD1Q9ULE6 856 aa17.86■□□□□ 0.45
FANCA-220ENST00000566409 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
FANCA-220ENST00000566409 JAG1P78504 1218 aa17.85■□□□□ 0.45
FANCA-220ENST00000566409 MLLT1Q03111 559 aaPredicted RBP17.85■□□□□ 0.45
FANCA-220ENST00000566409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
FANCA-220ENST00000566409 EDC3Q96F86 508 aaKnown RBP17.85■□□□□ 0.45
FANCA-220ENST00000566409 DHX36Q9H2U1 1008 aaKnown RBP17.85■□□□□ 0.45
FANCA-220ENST00000566409 PI4KBQ9UBF8 816 aa17.85■□□□□ 0.45
FANCA-220ENST00000566409 CPA4Q9UI42 421 aa17.85■□□□□ 0.45
FANCA-220ENST00000566409 HERC5Q9UII4 1024 aaKnown RBP17.85■□□□□ 0.45
FANCA-220ENST00000566409 CYP2C8P10632 490 aa17.84■□□□□ 0.45
FANCA-220ENST00000566409 CTGFP29279 349 aa17.84■□□□□ 0.45
FANCA-220ENST00000566409 CAP2P40123 477 aa17.84■□□□□ 0.45
FANCA-220ENST00000566409 MAP3K12Q12852 859 aa17.84■□□□□ 0.45
FANCA-220ENST00000566409 SAP30BPQ9UHR5 308 aaKnown RBP17.84■□□□□ 0.45
FANCA-220ENST00000566409 TRIM75PA6NK02 468 aa17.83■□□□□ 0.44
FANCA-220ENST00000566409 GOLIM4O00461 696 aa17.83■□□□□ 0.44
FANCA-220ENST00000566409 SMARCA5O60264 1052 aaPredicted RBP17.83■□□□□ 0.44
FANCA-220ENST00000566409 LACTBP83111 547 aaPredicted RBP17.83■□□□□ 0.44
FANCA-220ENST00000566409 SHROOM1Q2M3G4 852 aaPredicted RBP17.83■□□□□ 0.44
FANCA-220ENST00000566409 RIOK1Q9BRS2 568 aaKnown RBP17.83■□□□□ 0.44
FANCA-220ENST00000566409 PDE6AP16499 860 aa17.82■□□□□ 0.44
FANCA-220ENST00000566409 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
FANCA-220ENST00000566409 GADL1Q6ZQY3 521 aa17.82■□□□□ 0.44
FANCA-220ENST00000566409 FASTKD5Q7L8L6 764 aaKnown RBP17.82■□□□□ 0.44
FANCA-220ENST00000566409 FOXP4Q8IVH2 680 aaPredicted RBP17.82■□□□□ 0.44
FANCA-220ENST00000566409 DNAJC2Q99543 621 aaKnown RBP17.82■□□□□ 0.44
FANCA-220ENST00000566409 MGAMO43451 1857 aa17.82■□□□□ 0.44
FANCA-220ENST00000566409 LOC285556D6RIA3 1793 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 DDX60LQ5H9U9 1706 aaKnown RBP17.81■□□□□ 0.44
FANCA-220ENST00000566409 MKI67P46013 3256 aaKnown RBP17.81■□□□□ 0.44
FANCA-220ENST00000566409 TCRBV5S4A2TA0A5A2 114 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 BCRP11274 1271 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 ATP5JP18859 108 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 SPP2Q13103 211 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 TTF1Q15361 905 aaPredicted RBP17.81■□□□□ 0.44
FANCA-220ENST00000566409 SLFNL1Q499Z3 407 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 TREML2Q5T2D2 321 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 SLC9C2Q5TAH2 1124 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 TMED8Q6PL24 325 aaPredicted RBP17.81■□□□□ 0.44
FANCA-220ENST00000566409 LRRCC1Q9C099 1032 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 BOLA2Q9H3K6 86 aa17.81■□□□□ 0.44
FANCA-220ENST00000566409 ZNF532Q9HCE3 1301 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 ECM2O94769 699 aaPredicted RBP17.8■□□□□ 0.44
FANCA-220ENST00000566409 CERS3Q8IU89 383 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 ZNF280CQ8ND82 737 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 ARMC5Q96C12 935 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 TRIM47Q96LD4 638 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 PARK7Q99497 189 aaKnown RBP17.8■□□□□ 0.44
FANCA-220ENST00000566409 DCTPP1Q9H773 170 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 PCDHB15Q9Y5E8 787 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 PTCH2Q9Y6C5 1203 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 MYH7P12883 1935 aa17.8■□□□□ 0.44
FANCA-220ENST00000566409 DOCK3Q8IZD9 2030 aa17.79■□□□□ 0.44
FANCA-220ENST00000566409 USP17L5A8MUK1 530 aa17.79■□□□□ 0.44
FANCA-220ENST00000566409 CHGBP05060 677 aa17.79■□□□□ 0.44
FANCA-220ENST00000566409 USP5P45974 858 aa17.79■□□□□ 0.44
FANCA-220ENST00000566409 HAUS7Q99871 368 aa17.79■□□□□ 0.44
FANCA-220ENST00000566409 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
FANCA-220ENST00000566409 AGTPBP1Q9UPW5 1226 aa17.79■□□□□ 0.44
FANCA-220ENST00000566409 SLC45A1Q9Y2W3 748 aa17.79■□□□□ 0.44
FANCA-220ENST00000566409 RBBP6Q7Z6E9 1792 aaKnown RBP17.79■□□□□ 0.44
FANCA-220ENST00000566409 NAV1Q8NEY1 1877 aa17.78■□□□□ 0.44
FANCA-220ENST00000566409 MAGEB6P1A0A0J9YX57 407 aa17.78■□□□□ 0.44
FANCA-220ENST00000566409 GDF11O95390 407 aa17.78■□□□□ 0.44
FANCA-220ENST00000566409 HMGCS2P54868 508 aa17.78■□□□□ 0.44
FANCA-220ENST00000566409 RRP1P56182 461 aaKnown RBP17.78■□□□□ 0.44
FANCA-220ENST00000566409 EVX2Q03828 476 aa17.78■□□□□ 0.44
FANCA-220ENST00000566409 ARHGEF6Q15052 776 aa17.78■□□□□ 0.44
FANCA-220ENST00000566409 CRACR2BQ8N4Y2 399 aaPredicted RBP17.78■□□□□ 0.44
FANCA-220ENST00000566409 POTEFA5A3E0 1075 aa17.77■□□□□ 0.44
FANCA-220ENST00000566409 PSMC4P43686 418 aa17.77■□□□□ 0.44
FANCA-220ENST00000566409 KIF22Q14807 665 aa17.77■□□□□ 0.44
FANCA-220ENST00000566409 SH3D19Q5HYK7 790 aa17.77■□□□□ 0.44
FANCA-220ENST00000566409 TATDN1Q6P1N9 297 aa17.77■□□□□ 0.44
FANCA-220ENST00000566409 LCORLQ8N3X6 602 aa17.77■□□□□ 0.44
FANCA-220ENST00000566409 PROCA1Q8NCQ7 364 aaPredicted RBP17.77■□□□□ 0.44
FANCA-220ENST00000566409 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
FANCA-220ENST00000566409 WDR18Q9BV38 432 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms