RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
COMMD4-214ENST00000566230 SPTY2D1Q68D10 685 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-214ENST00000566230 SLF2Q8IX21 1173 aa16.59■□□□□ 0.25
COMMD4-214ENST00000566230 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.59■□□□□ 0.25
COMMD4-214ENST00000566230 SMC4Q9NTJ3 1288 aa16.59■□□□□ 0.25
COMMD4-214ENST00000566230 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
COMMD4-214ENST00000566230 SPP2Q13103 211 aa16.58■□□□□ 0.24
COMMD4-214ENST00000566230 RRP1BQ14684 758 aaKnown RBP16.58■□□□□ 0.24
COMMD4-214ENST00000566230 PROCA1Q8NCQ7 364 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-214ENST00000566230 XAGE2Q96GT9 111 aa16.58■□□□□ 0.24
COMMD4-214ENST00000566230 GJD2Q9UKL4 321 aa16.58■□□□□ 0.24
COMMD4-214ENST00000566230 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-214ENST00000566230 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
COMMD4-214ENST00000566230 ERICH6Q7L0X2 663 aa16.57■□□□□ 0.24
COMMD4-214ENST00000566230 NECAB2Q7Z6G3 386 aa16.57■□□□□ 0.24
COMMD4-214ENST00000566230 SLC17A8Q8NDX2 589 aa16.57■□□□□ 0.24
COMMD4-214ENST00000566230 GDF15Q99988 308 aa16.57■□□□□ 0.24
COMMD4-214ENST00000566230 OSBPL5Q9H0X9 879 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-214ENST00000566230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.57■□□□□ 0.24
COMMD4-214ENST00000566230 PNMA3Q9UL41 463 aa16.57■□□□□ 0.24
COMMD4-214ENST00000566230 NOB1Q9ULX3 412 aaKnown RBP16.57■□□□□ 0.24
COMMD4-214ENST00000566230 DLL1O00548 723 aa16.56■□□□□ 0.24
COMMD4-214ENST00000566230 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-214ENST00000566230 HMGCS2P54868 508 aa16.56■□□□□ 0.24
COMMD4-214ENST00000566230 TFCP2Q12800 502 aa16.56■□□□□ 0.24
COMMD4-214ENST00000566230 TRIM32Q13049 653 aa16.56■□□□□ 0.24
COMMD4-214ENST00000566230 ZNF280CQ8ND82 737 aa16.56■□□□□ 0.24
COMMD4-214ENST00000566230 MEIS3Q99687 375 aa16.56■□□□□ 0.24
COMMD4-214ENST00000566230 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
COMMD4-214ENST00000566230 SIPA1L1O43166 1804 aa16.55■□□□□ 0.24
COMMD4-214ENST00000566230 HMGCRP04035 888 aa16.55■□□□□ 0.24
COMMD4-214ENST00000566230 CAP2P40123 477 aa16.55■□□□□ 0.24
COMMD4-214ENST00000566230 GCLCP48506 637 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-214ENST00000566230 PI16Q6UXB8 463 aa16.55■□□□□ 0.24
COMMD4-214ENST00000566230 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
COMMD4-214ENST00000566230 ANKLE1Q8NAG6 615 aa16.55■□□□□ 0.24
COMMD4-214ENST00000566230 NSUN4Q96CB9 384 aaKnown RBP16.55■□□□□ 0.24
COMMD4-214ENST00000566230 ASCC2Q9H1I8 757 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-214ENST00000566230 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
COMMD4-214ENST00000566230 COL2A1P02458 1487 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-214ENST00000566230 BMP8BP34820 402 aa16.54■□□□□ 0.24
COMMD4-214ENST00000566230 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
COMMD4-214ENST00000566230 SH3D19Q5HYK7 790 aa16.54■□□□□ 0.24
COMMD4-214ENST00000566230 C7orf61Q8IZ16 206 aa16.54■□□□□ 0.24
COMMD4-214ENST00000566230 ZMYND8Q9ULU4 1186 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-214ENST00000566230 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
COMMD4-214ENST00000566230 AKAP2Q9Y2D5 859 aa16.54■□□□□ 0.24
COMMD4-214ENST00000566230 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
COMMD4-214ENST00000566230 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
COMMD4-214ENST00000566230 USP17L5A8MUK1 530 aa16.53■□□□□ 0.24
COMMD4-214ENST00000566230 MAP4K4O95819 1239 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-214ENST00000566230 LDHCP07864 332 aa16.53■□□□□ 0.24
COMMD4-214ENST00000566230 SPATA5Q8NB90 893 aa16.53■□□□□ 0.24
COMMD4-214ENST00000566230 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
COMMD4-214ENST00000566230 MORF4L1Q9UBU8 362 aa16.53■□□□□ 0.24
COMMD4-214ENST00000566230 ZBED9Q6R2W3 1325 aa16.52■□□□□ 0.24
COMMD4-214ENST00000566230 PEX10O60683 326 aa16.52■□□□□ 0.24
COMMD4-214ENST00000566230 JAG1P78504 1218 aa16.52■□□□□ 0.24
COMMD4-214ENST00000566230 PABPC4Q13310 644 aaKnown RBP eCLIP16.52■□□□□ 0.24
COMMD4-214ENST00000566230 TRIB2Q92519 343 aa16.52■□□□□ 0.24
COMMD4-214ENST00000566230 NEUROD6Q96NK8 337 aa16.52■□□□□ 0.24
COMMD4-214ENST00000566230 TBC1D2Q9BYX2 928 aa16.52■□□□□ 0.24
COMMD4-214ENST00000566230 NBPF3Q9H094 633 aa16.52■□□□□ 0.24
COMMD4-214ENST00000566230 HMX1Q9NP08 348 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-214ENST00000566230 MYO5AQ9Y4I1 1855 aaKnown RBP16.51■□□□□ 0.23
COMMD4-214ENST00000566230 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
COMMD4-214ENST00000566230 GSTO1P78417 241 aa16.51■□□□□ 0.23
COMMD4-214ENST00000566230 MTX1Q13505 466 aa16.51■□□□□ 0.23
COMMD4-214ENST00000566230 OGDHLQ9ULD0 1010 aa16.51■□□□□ 0.23
COMMD4-214ENST00000566230 SYN1P17600 705 aa16.5■□□□□ 0.23
COMMD4-214ENST00000566230 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-214ENST00000566230 MAP3K21Q5TCX8 1036 aa16.5■□□□□ 0.23
COMMD4-214ENST00000566230 TEX11Q8IYF3 940 aa16.5■□□□□ 0.23
COMMD4-214ENST00000566230 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-214ENST00000566230 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
COMMD4-214ENST00000566230 WDR18Q9BV38 432 aa16.5■□□□□ 0.23
COMMD4-214ENST00000566230 C11orf49Q9H6J7 331 aa16.5■□□□□ 0.23
COMMD4-214ENST00000566230 RAI14Q9P0K7 980 aa16.5■□□□□ 0.23
COMMD4-214ENST00000566230 HERC5Q9UII4 1024 aaKnown RBP16.5■□□□□ 0.23
COMMD4-214ENST00000566230 CYP2B6P20813 491 aa16.49■□□□□ 0.23
COMMD4-214ENST00000566230 HOXA7P31268 230 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-214ENST00000566230 MCAMP43121 646 aa16.49■□□□□ 0.23
COMMD4-214ENST00000566230 MAGEA10P43363 369 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-214ENST00000566230 MTMR2Q13614 643 aa16.49■□□□□ 0.23
COMMD4-214ENST00000566230 GPR153Q6NV75 609 aa16.49■□□□□ 0.23
COMMD4-214ENST00000566230 AS3MTQ9HBK9 375 aa16.49■□□□□ 0.23
COMMD4-214ENST00000566230 TXNRD2Q9NNW7 524 aa16.49■□□□□ 0.23
COMMD4-214ENST00000566230 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
COMMD4-214ENST00000566230 PFASO15067 1338 aa16.48■□□□□ 0.23
COMMD4-214ENST00000566230 BACE1P56817 501 aa16.48■□□□□ 0.23
COMMD4-214ENST00000566230 SHROOM1Q2M3G4 852 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-214ENST00000566230 GORABQ5T7V8 394 aa16.48■□□□□ 0.23
COMMD4-214ENST00000566230 Q7L0L9 218 aa16.48■□□□□ 0.23
COMMD4-214ENST00000566230 DEFB123Q8N688 67 aa16.48■□□□□ 0.23
COMMD4-214ENST00000566230 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
COMMD4-214ENST00000566230 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
COMMD4-214ENST00000566230 RBPJLQ9UBG7 517 aa16.48■□□□□ 0.23
COMMD4-214ENST00000566230 GNAI3P08754 354 aa16.47■□□□□ 0.23
COMMD4-214ENST00000566230 XRCC5P13010 732 aaKnown RBP16.47■□□□□ 0.23
COMMD4-214ENST00000566230 PRKAR2AP13861 404 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms