RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 NPM3O75607 178 aaKnown RBP23.15■■□□□ 1.3
NME3-207ENST00000564628 DPF3Q92784 378 aa23.15■■□□□ 1.3
NME3-207ENST00000564628 EAF2Q96CJ1 260 aaPredicted RBP23.15■■□□□ 1.3
NME3-207ENST00000564628 CRBNQ96SW2 442 aa23.15■■□□□ 1.3
NME3-207ENST00000564628 HTATIP2Q9BUP3 242 aa23.15■■□□□ 1.3
NME3-207ENST00000564628 MROH7-TTC4A0A0A0MT08 1334 aa23.14■■□□□ 1.3
NME3-207ENST00000564628 CAPN2P17655 700 aa23.14■■□□□ 1.29
NME3-207ENST00000564628 BTDP43251 543 aa23.14■■□□□ 1.29
NME3-207ENST00000564628 GADL1Q6ZQY3 521 aa23.14■■□□□ 1.29
NME3-207ENST00000564628 RHPN1Q8TCX5 695 aa23.14■■□□□ 1.29
NME3-207ENST00000564628 DBNDD2Q9BQY9 259 aa23.14■■□□□ 1.29
NME3-207ENST00000564628 DDX4Q9NQI0 724 aaKnown RBP23.14■■□□□ 1.29
NME3-207ENST00000564628 DBNLQ9UJU6 430 aaKnown RBP23.14■■□□□ 1.29
NME3-207ENST00000564628 GABRQQ9UN88 632 aa23.14■■□□□ 1.29
NME3-207ENST00000564628 PTPRFP10586 1907 aa23.14■■□□□ 1.29
NME3-207ENST00000564628 PHIPQ8WWQ0 1821 aa23.13■■□□□ 1.29
NME3-207ENST00000564628 GPR75-ASB3A0A0A6YYF3 556 aa23.13■■□□□ 1.29
NME3-207ENST00000564628 TBC1D12O60347 775 aa23.13■■□□□ 1.29
NME3-207ENST00000564628 PXYLP1Q8TE99 480 aa23.13■■□□□ 1.29
NME3-207ENST00000564628 U2AF1L4Q8WU68 220 aaKnown RBP23.13■■□□□ 1.29
NME3-207ENST00000564628 MAP4K4O95819 1239 aaPredicted RBP23.12■■□□□ 1.29
NME3-207ENST00000564628 PICALMQ13492 652 aa23.12■■□□□ 1.29
NME3-207ENST00000564628 IRF5Q13568 498 aa23.12■■□□□ 1.29
NME3-207ENST00000564628 GORABQ5T7V8 394 aa23.12■■□□□ 1.29
NME3-207ENST00000564628 CHRDL2Q6WN34 429 aa23.12■■□□□ 1.29
NME3-207ENST00000564628 SMCR8Q8TEV9 937 aaPredicted RBP23.12■■□□□ 1.29
NME3-207ENST00000564628 KIF1BPQ96EK5 621 aa23.12■■□□□ 1.29
NME3-207ENST00000564628 ZNF512BQ96KM6 892 aaPredicted RBP23.12■■□□□ 1.29
NME3-207ENST00000564628 TLR7Q9NYK1 1049 aaKnown RBP23.12■■□□□ 1.29
NME3-207ENST00000564628 HMG20BQ9P0W2 317 aa23.12■■□□□ 1.29
NME3-207ENST00000564628 AGTPBP1Q9UPW5 1226 aa23.12■■□□□ 1.29
NME3-207ENST00000564628 TRIOBPQ9H2D6 2365 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 TRIM75PA6NK02 468 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 ADCY3O60266 1144 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 RAB11FIP3O75154 756 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 SGPL1O95470 568 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 UQCRFS1P1P0C7P4 283 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 FLT3LGP49771 235 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 RHBDL3P58872 404 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 MECOMQ03112 1051 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 ERICH6Q7L0X2 663 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 UNC93B1Q9H1C4 597 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 PCDHB15Q9Y5E8 787 aa23.11■■□□□ 1.29
NME3-207ENST00000564628 MYO5AQ9Y4I1 1855 aaKnown RBP23.11■■□□□ 1.29
NME3-207ENST00000564628 COL2A1P02458 1487 aaPredicted RBP23.11■■□□□ 1.29
NME3-207ENST00000564628 MAST2Q6P0Q8 1798 aa23.1■■□□□ 1.29
NME3-207ENST00000564628 TNPO2O14787 897 aaKnown RBP23.1■■□□□ 1.29
NME3-207ENST00000564628 MCAMP43121 646 aa23.1■■□□□ 1.29
NME3-207ENST00000564628 SPATA5Q8NB90 893 aa23.1■■□□□ 1.29
NME3-207ENST00000564628 CCDC8Q9H0W5 538 aaPredicted RBP23.1■■□□□ 1.29
NME3-207ENST00000564628 FARP2O94887 1054 aaPredicted RBP23.09■■□□□ 1.29
NME3-207ENST00000564628 SLURP2P0DP57 97 aa23.09■■□□□ 1.29
NME3-207ENST00000564628 GSTO1P78417 241 aa23.09■■□□□ 1.29
NME3-207ENST00000564628 PI16Q6UXB8 463 aa23.09■■□□□ 1.29
NME3-207ENST00000564628 PROCA1Q8NCQ7 364 aaPredicted RBP23.09■■□□□ 1.29
NME3-207ENST00000564628 ZNF384Q8TF68 577 aa23.09■■□□□ 1.29
NME3-207ENST00000564628 OSBPL5Q9H0X9 879 aaPredicted RBP23.09■■□□□ 1.29
NME3-207ENST00000564628 PNMA3Q9UL41 463 aa23.09■■□□□ 1.29
NME3-207ENST00000564628 NR2E3Q9Y5X4 410 aa23.09■■□□□ 1.29
NME3-207ENST00000564628 INHAP05111 366 aa23.08■■□□□ 1.29
NME3-207ENST00000564628 LDHCP07864 332 aa23.08■■□□□ 1.29
NME3-207ENST00000564628 CCDC158Q5M9N0 1113 aa23.08■■□□□ 1.29
NME3-207ENST00000564628 AACSQ86V21 672 aa23.08■■□□□ 1.29
NME3-207ENST00000564628 TBC1D2Q9BYX2 928 aa23.08■■□□□ 1.29
NME3-207ENST00000564628 DCTPP1Q9H773 170 aa23.08■■□□□ 1.29
NME3-207ENST00000564628 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.29
NME3-207ENST00000564628 RBM27Q9P2N5 1060 aaKnown RBP23.08■■□□□ 1.29
NME3-207ENST00000564628 ELNP15502 786 aa23.07■■□□□ 1.28
NME3-207ENST00000564628 FAM110CQ1W6H9 321 aa23.07■■□□□ 1.28
NME3-207ENST00000564628 TTC39AQ5SRH9 613 aa23.07■■□□□ 1.28
NME3-207ENST00000564628 COA7Q96BR5 231 aa23.07■■□□□ 1.28
NME3-207ENST00000564628 NSUN4Q96CB9 384 aaKnown RBP23.07■■□□□ 1.28
NME3-207ENST00000564628 PRO3102Q9H379 93 aa23.07■■□□□ 1.28
NME3-207ENST00000564628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.07■■□□□ 1.28
NME3-207ENST00000564628 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
NME3-207ENST00000564628 AAMPQ13685 434 aa23.06■■□□□ 1.28
NME3-207ENST00000564628 TREML2Q5T2D2 321 aa23.06■■□□□ 1.28
NME3-207ENST00000564628 CLASRPQ8N2M8 674 aaKnown RBP23.06■■□□□ 1.28
NME3-207ENST00000564628 ANKRD13CQ8N6S4 541 aa23.06■■□□□ 1.28
NME3-207ENST00000564628 PAK6Q9NQU5 681 aaPredicted RBP23.06■■□□□ 1.28
NME3-207ENST00000564628 SUPT16HQ9Y5B9 1047 aaKnown RBP23.06■■□□□ 1.28
NME3-207ENST00000564628 LOC285556D6RIA3 1793 aa23.05■■□□□ 1.28
NME3-207ENST00000564628 APBB1O00213 710 aa23.05■■□□□ 1.28
NME3-207ENST00000564628 CCDC84Q86UT8 332 aaPredicted RBP23.05■■□□□ 1.28
NME3-207ENST00000564628 ZNF280CQ8ND82 737 aa23.05■■□□□ 1.28
NME3-207ENST00000564628 RANBP2P49792 3224 aaKnown RBP23.04■■□□□ 1.28
NME3-207ENST00000564628 GCLCP48506 637 aaPredicted RBP23.04■■□□□ 1.28
NME3-207ENST00000564628 PABPC4Q13310 644 aaKnown RBP eCLIP23.04■■□□□ 1.283e-7■■■■□ 23
NME3-207ENST00000564628 CRISPLD2Q9H0B8 497 aa23.04■■□□□ 1.28
NME3-207ENST00000564628 FAM196BA6NMK8 535 aa23.03■■□□□ 1.28
NME3-207ENST00000564628 CAP2P40123 477 aa23.03■■□□□ 1.28
NME3-207ENST00000564628 SPP2Q13103 211 aa23.03■■□□□ 1.28
NME3-207ENST00000564628 DEFB118Q96PH6 123 aa23.03■■□□□ 1.28
NME3-207ENST00000564628 HERC5Q9UII4 1024 aaKnown RBP23.03■■□□□ 1.28
NME3-207ENST00000564628 TFRCP02786 760 aaKnown RBP23.02■■□□□ 1.28
NME3-207ENST00000564628 TBC1D9Q6ZT07 1266 aa23.02■■□□□ 1.28
NME3-207ENST00000564628 LRRCC1Q9C099 1032 aa23.02■■□□□ 1.28
NME3-207ENST00000564628 SNRKQ9NRH2 765 aa23.02■■□□□ 1.28
NME3-207ENST00000564628 RAI14Q9P0K7 980 aa23.02■■□□□ 1.28
NME3-207ENST00000564628 A0A1W2PPC1 479 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms