RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 VAMP1P23763 118 aa7.22□□□□□ -1.25
CHD9-210ENST00000564582 GBP2P32456 591 aaPredicted RBP7.22□□□□□ -1.25
CHD9-210ENST00000564582 TTLL4Q14679 1199 aa7.22□□□□□ -1.25
CHD9-210ENST00000564582 SMYD4Q8IYR2 804 aaPredicted RBP7.22□□□□□ -1.25
CHD9-210ENST00000564582 GAL3ST3Q96A11 431 aa7.22□□□□□ -1.25
CHD9-210ENST00000564582 TMEM74Q96NL1 305 aa7.22□□□□□ -1.25
CHD9-210ENST00000564582 SNCAIPQ9Y6H5 919 aa7.22□□□□□ -1.25
CHD9-210ENST00000564582 DCDC2CA8MYV0 355 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 HCLS1P14317 486 aaPredicted RBP7.21□□□□□ -1.26
CHD9-210ENST00000564582 SEPT6Q14141 434 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 TSNAXIP1Q2TAA8 658 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 CDC37L1Q7L3B6 337 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 CCDC84Q86UT8 332 aaPredicted RBP7.21□□□□□ -1.26
CHD9-210ENST00000564582 KCT2Q8NC54 265 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 PHC3Q8NDX5 983 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 GGT7Q9UJ14 662 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 PCOLCE2Q9UKZ9 415 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 PCDHB5Q9Y5E4 795 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 NCAPD3P42695 1498 aa7.21□□□□□ -1.26
CHD9-210ENST00000564582 SYNJ1O43426 1573 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 FANCGO15287 622 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 BPNT1O95861 308 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 TFE3P19532 575 aaPredicted RBP7.2□□□□□ -1.26
CHD9-210ENST00000564582 ZNF76P36508 570 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 LMNB2Q03252 620 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 C12orf40Q86WS4 652 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 MRRFQ96E11 262 aaKnown RBP7.2□□□□□ -1.26
CHD9-210ENST00000564582 MFSD14AQ96MC6 490 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 TBC1D32Q96NH3 1257 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 BACH2Q9BYV9 841 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 METTL5Q9NRN9 209 aaKnown RBP7.2□□□□□ -1.26
CHD9-210ENST00000564582 ATG3Q9NT62 314 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 PRKAG2Q9UGJ0 569 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 TLR6Q9Y2C9 796 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 CSADQ9Y600 493 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 MAPKBP1O60336 1514 aa7.2□□□□□ -1.26
CHD9-210ENST00000564582 KTN1Q86UP2 1357 aaKnown RBP7.2□□□□□ -1.26
CHD9-210ENST00000564582 PRAMEF27A3QJZ7 478 aa7.19□□□□□ -1.26
CHD9-210ENST00000564582 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
CHD9-210ENST00000564582 CYP27A1Q02318 531 aa7.19□□□□□ -1.26
CHD9-210ENST00000564582 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
CHD9-210ENST00000564582 CPSF6Q16630 551 aaKnown RBP eCLIP7.19□□□□□ -1.26
CHD9-210ENST00000564582 PPM1JQ5JR12 505 aa7.19□□□□□ -1.26
CHD9-210ENST00000564582 WIPI1Q5MNZ9 446 aaPredicted RBP7.19□□□□□ -1.26
CHD9-210ENST00000564582 LRFN4Q6PJG9 635 aa7.19□□□□□ -1.26
CHD9-210ENST00000564582 ERMP1Q7Z2K6 904 aa7.19□□□□□ -1.26
CHD9-210ENST00000564582 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.19□□□□□ -1.26
CHD9-210ENST00000564582 JARID2Q92833 1246 aaPredicted RBP7.19□□□□□ -1.26
CHD9-210ENST00000564582 PLPPR2Q96GM1 343 aa7.19□□□□□ -1.26
CHD9-210ENST00000564582 METTL22Q9BUU2 404 aaPredicted RBP7.19□□□□□ -1.26
CHD9-210ENST00000564582 ISY1Q9ULR0 285 aaKnown RBP7.19□□□□□ -1.26
CHD9-210ENST00000564582 PRXQ9BXM0 1461 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 RPL6Q02878 288 aaKnown RBP7.18□□□□□ -1.26
CHD9-210ENST00000564582 PTPN11Q06124 597 aaPredicted RBP7.18□□□□□ -1.26
CHD9-210ENST00000564582 INPP5AQ14642 412 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 SNAP47Q5SQN1 464 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 ZBTB37Q5TC79 503 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 ZAR1Q86SH2 424 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 FBXL6Q8N531 539 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 SHKBP1Q8TBC3 707 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 ZNF507Q8TCN5 953 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 ISL2Q96A47 359 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 RHOVQ96L33 236 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 OSBPL1AQ9BXW6 950 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 NUDCQ9Y266 331 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 TACC3Q9Y6A5 838 aa7.18□□□□□ -1.26
CHD9-210ENST00000564582 WDR97A6NE52 1622 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 MINDY4BA8MYZ0 360 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 WDR64B1ANS9 1081 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 F6X3S4 739 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 SCAMP3O14828 347 aaKnown RBP7.17□□□□□ -1.26
CHD9-210ENST00000564582 PF4P02776 101 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 ITGB7P26010 798 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 GRIK1P39086 918 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 ETF1P62495 437 aaKnown RBP7.17□□□□□ -1.26
CHD9-210ENST00000564582 RING1Q06587 406 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 PDE4BQ07343 736 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 DUSP27Q5VZP5 1158 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.17□□□□□ -1.26
CHD9-210ENST00000564582 CYFIP1Q7L576 1253 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 LGR6Q9HBX8 967 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 RNF112Q9ULX5 631 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 CCDC18Q5T9S5 1454 aa7.17□□□□□ -1.26
CHD9-210ENST00000564582 SMARCA4P51532 1647 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 RECKO95980 971 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 SEZ6L2Q6UXD5 910 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 ZDHHC13Q8IUH4 622 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 GATAD2BQ8WXI9 593 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 RNF34Q969K3 372 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 WNT10AQ9GZT5 417 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 LEMD3Q9Y2U8 911 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 PEG3Q9GZU2 1588 aa7.16□□□□□ -1.26
CHD9-210ENST00000564582 F13BP05160 661 aa7.15□□□□□ -1.26
CHD9-210ENST00000564582 EIF4A3P38919 411 aaKnown RBP7.15□□□□□ -1.26
CHD9-210ENST00000564582 FANCCQ00597 558 aa7.15□□□□□ -1.26
CHD9-210ENST00000564582 FAM160A1Q05DH4 1040 aa7.15□□□□□ -1.26
CHD9-210ENST00000564582 CYP27C1Q4G0S4 372 aa7.15□□□□□ -1.26
CHD9-210ENST00000564582 GOLM1Q8NBJ4 401 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms