RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
SPG7-207ENST00000563218 DPF3Q92784 378 aa16.45■□□□□ 0.22
SPG7-207ENST00000563218 FAM163AQ96GL9 167 aaPredicted RBP16.45■□□□□ 0.22
SPG7-207ENST00000563218 HMG20BQ9P0W2 317 aa16.45■□□□□ 0.22
SPG7-207ENST00000563218 LAMA3Q16787 3333 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 GPR75-ASB3A0A0A6YYF3 556 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 INHAP05111 366 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 TRIM27P14373 513 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 FLT3LGP49771 235 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 FASTKD5Q7L8L6 764 aaKnown RBP16.44■□□□□ 0.22
SPG7-207ENST00000563218 SLAIN1Q8ND83 568 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 SLC17A8Q8NDX2 589 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 PANK1Q8TE04 598 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 U2AF1L4Q8WU68 220 aaKnown RBP16.44■□□□□ 0.22
SPG7-207ENST00000563218 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
SPG7-207ENST00000563218 RBM27Q9P2N5 1060 aaKnown RBP16.44■□□□□ 0.22
SPG7-207ENST00000563218 COL2A1P02458 1487 aaPredicted RBP16.43■□□□□ 0.22
SPG7-207ENST00000563218 PNMA6EA0A0J9YXQ4 647 aa16.43■□□□□ 0.22
SPG7-207ENST00000563218 ADCY3O60266 1144 aa16.43■□□□□ 0.22
SPG7-207ENST00000563218 CTNND1O60716 968 aaKnown RBP16.43■□□□□ 0.22
SPG7-207ENST00000563218 UBXN2AP68543 259 aa16.43■□□□□ 0.22
SPG7-207ENST00000563218 CLUAP1Q96AJ1 413 aa16.43■□□□□ 0.22
SPG7-207ENST00000563218 NSUN4Q96CB9 384 aaKnown RBP16.43■□□□□ 0.22
SPG7-207ENST00000563218 SLC45A1Q9Y2W3 748 aa16.43■□□□□ 0.22
SPG7-207ENST00000563218 FARP2O94887 1054 aaPredicted RBP16.42■□□□□ 0.22
SPG7-207ENST00000563218 MCAMP43121 646 aa16.42■□□□□ 0.22
SPG7-207ENST00000563218 MTX1Q13505 466 aa16.42■□□□□ 0.22
SPG7-207ENST00000563218 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
SPG7-207ENST00000563218 SPTY2D1Q68D10 685 aaPredicted RBP16.42■□□□□ 0.22
SPG7-207ENST00000563218 ANKRD13CQ8N6S4 541 aa16.42■□□□□ 0.22
SPG7-207ENST00000563218 SMCR8Q8TEV9 937 aaPredicted RBP16.42■□□□□ 0.22
SPG7-207ENST00000563218 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
SPG7-207ENST00000563218 AGTPBP1Q9UPW5 1226 aa16.42■□□□□ 0.22
SPG7-207ENST00000563218 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
SPG7-207ENST00000563218 TNPO2O14787 897 aaKnown RBP16.41■□□□□ 0.22
SPG7-207ENST00000563218 RLBP1P12271 317 aa16.41■□□□□ 0.22
SPG7-207ENST00000563218 ARID4AP29374 1257 aaPredicted RBP16.41■□□□□ 0.22
SPG7-207ENST00000563218 SHROOM1Q2M3G4 852 aaPredicted RBP16.41■□□□□ 0.22
SPG7-207ENST00000563218 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
SPG7-207ENST00000563218 SPATA5Q8NB90 893 aa16.41■□□□□ 0.22
SPG7-207ENST00000563218 NKX2-3Q8TAU0 364 aa16.41■□□□□ 0.22
SPG7-207ENST00000563218 OSBPL5Q9H0X9 879 aaPredicted RBP16.41■□□□□ 0.22
SPG7-207ENST00000563218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.41■□□□□ 0.227e-15■■■■□ 23
SPG7-207ENST00000563218 AKAP2Q9Y2D5 859 aa16.41■□□□□ 0.22
SPG7-207ENST00000563218 NAV1Q8NEY1 1877 aa16.41■□□□□ 0.22
SPG7-207ENST00000563218 TBC1D12O60347 775 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 PEX10O60683 326 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 SGPL1O95470 568 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 GNAI3P08754 354 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 HMGCS2P54868 508 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 SH3RF3Q8TEJ3 882 aaPredicted RBP16.4■□□□□ 0.22
SPG7-207ENST00000563218 DEFB118Q96PH6 123 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 PRO3102Q9H379 93 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 MYH8P13535 1937 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 COL6A3P12111 3177 aa16.4■□□□□ 0.22
SPG7-207ENST00000563218 JAG1P78504 1218 aa16.39■□□□□ 0.21
SPG7-207ENST00000563218 SPP2Q13103 211 aa16.39■□□□□ 0.21
SPG7-207ENST00000563218 TEX11Q8IYF3 940 aa16.39■□□□□ 0.21
SPG7-207ENST00000563218 DIS3LQ8TF46 1054 aaKnown RBP16.39■□□□□ 0.21
SPG7-207ENST00000563218 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.21
SPG7-207ENST00000563218 SNRKQ9NRH2 765 aa16.39■□□□□ 0.21
SPG7-207ENST00000563218 HDAC5Q9UQL6 1122 aa16.39■□□□□ 0.21
SPG7-207ENST00000563218 ZBTB7BO15156 539 aaPredicted RBP16.38■□□□□ 0.21
SPG7-207ENST00000563218 TRIM32Q13049 653 aa16.38■□□□□ 0.21
SPG7-207ENST00000563218 IRF5Q13568 498 aa16.38■□□□□ 0.21
SPG7-207ENST00000563218 AAMPQ13685 434 aa16.38■□□□□ 0.21
SPG7-207ENST00000563218 FAM110CQ1W6H9 321 aa16.38■□□□□ 0.21
SPG7-207ENST00000563218 ADGRA1Q86SQ6 560 aa16.38■□□□□ 0.21
SPG7-207ENST00000563218 ITPRIPQ8IWB1 547 aa16.38■□□□□ 0.21
SPG7-207ENST00000563218 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
SPG7-207ENST00000563218 PXYLP1Q8TE99 480 aa16.38■□□□□ 0.21
SPG7-207ENST00000563218 DNAJC18Q9H819 358 aa16.38■□□□□ 0.21
SPG7-207ENST00000563218 PAK6Q9NQU5 681 aaPredicted RBP16.38■□□□□ 0.21
SPG7-207ENST00000563218 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
SPG7-207ENST00000563218 CAP2P40123 477 aa16.37■□□□□ 0.21
SPG7-207ENST00000563218 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
SPG7-207ENST00000563218 B4GALNT3Q6L9W6 998 aa16.37■□□□□ 0.21
SPG7-207ENST00000563218 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
SPG7-207ENST00000563218 ZNF280CQ8ND82 737 aa16.37■□□□□ 0.21
SPG7-207ENST00000563218 HTATIP2Q9BUP3 242 aa16.37■□□□□ 0.21
SPG7-207ENST00000563218 AATFQ9NY61 560 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPG7-207ENST00000563218 DDX19BQ9UMR2 479 aa16.37■□□□□ 0.21
SPG7-207ENST00000563218 GNAI2P04899 355 aa16.36■□□□□ 0.21
SPG7-207ENST00000563218 GSTO1P78417 241 aa16.36■□□□□ 0.21
SPG7-207ENST00000563218 COA7Q96BR5 231 aa16.36■□□□□ 0.21
SPG7-207ENST00000563218 DBNDD2Q9BQY9 259 aa16.36■□□□□ 0.21
SPG7-207ENST00000563218 CRISPLD2Q9H0B8 497 aa16.36■□□□□ 0.21
SPG7-207ENST00000563218 ASCC2Q9H1I8 757 aaPredicted RBP16.36■□□□□ 0.21
SPG7-207ENST00000563218 SOX1O00570 391 aaPredicted RBP16.35■□□□□ 0.21
SPG7-207ENST00000563218 TFRCP02786 760 aaKnown RBP16.35■□□□□ 0.21
SPG7-207ENST00000563218 LDHCP07864 332 aa16.35■□□□□ 0.21
SPG7-207ENST00000563218 MTMR2Q13614 643 aa16.35■□□□□ 0.21
SPG7-207ENST00000563218 MAPKAPK5Q8IW41 473 aa16.35■□□□□ 0.21
SPG7-207ENST00000563218 PAWRQ96IZ0 340 aaKnown RBP16.35■□□□□ 0.21
SPG7-207ENST00000563218 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPG7-207ENST00000563218 CHMP4BQ9H444 224 aaKnown RBP16.35■□□□□ 0.21
SPG7-207ENST00000563218 C1orf115Q9H7X2 142 aa16.35■□□□□ 0.21
SPG7-207ENST00000563218 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms