RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GADL1Q6ZQY3 521 aa19.86■□□□□ 0.77
SNX1-213ENST00000561026 SH3TC2Q8TF17 1288 aa19.86■□□□□ 0.77
SNX1-213ENST00000561026 CCDC8Q9H0W5 538 aaPredicted RBP19.86■□□□□ 0.77
SNX1-213ENST00000561026 TLR7Q9NYK1 1049 aaKnown RBP19.86■□□□□ 0.77
SNX1-213ENST00000561026 SRRDQ9UH36 339 aa19.86■□□□□ 0.77
SNX1-213ENST00000561026 ZSWIM8A7E2V4 1837 aa19.86■□□□□ 0.77
SNX1-213ENST00000561026 OSBPP22059 807 aa19.85■□□□□ 0.77
SNX1-213ENST00000561026 SLC4A8Q2Y0W8 1093 aa19.85■□□□□ 0.77
SNX1-213ENST00000561026 ADGRA1Q86SQ6 560 aa19.85■□□□□ 0.77
SNX1-213ENST00000561026 CCDC84Q86UT8 332 aaPredicted RBP19.85■□□□□ 0.77
SNX1-213ENST00000561026 DHX36Q9H2U1 1008 aaKnown RBP19.85■□□□□ 0.77
SNX1-213ENST00000561026 PIH1D3Q9NQM4 214 aaKnown RBP19.85■□□□□ 0.77
SNX1-213ENST00000561026 PI4KBQ9UBF8 816 aa19.85■□□□□ 0.77
SNX1-213ENST00000561026 HERC5Q9UII4 1024 aaKnown RBP19.85■□□□□ 0.77
SNX1-213ENST00000561026 RBBP6Q7Z6E9 1792 aaKnown RBP19.85■□□□□ 0.77
SNX1-213ENST00000561026 CAP2P40123 477 aa19.84■□□□□ 0.77
SNX1-213ENST00000561026 DOCK1Q14185 1865 aa19.84■□□□□ 0.77
SNX1-213ENST00000561026 MYCP01106 439 aaPredicted RBP19.83■□□□□ 0.77
SNX1-213ENST00000561026 SPP2Q13103 211 aa19.83■□□□□ 0.77
SNX1-213ENST00000561026 RRP1BQ14684 758 aaKnown RBP19.83■□□□□ 0.77
SNX1-213ENST00000561026 TGFBRAP1Q8WUH2 860 aa19.83■□□□□ 0.77
SNX1-213ENST00000561026 AGTPBP1Q9UPW5 1226 aa19.83■□□□□ 0.77
SNX1-213ENST00000561026 EXOC6BQ9Y2D4 811 aa19.83■□□□□ 0.77
SNX1-213ENST00000561026 FCGRTP55899 365 aa19.83■□□□□ 0.76
SNX1-213ENST00000561026 ERC1Q8IUD2 1116 aa19.83■□□□□ 0.76
SNX1-213ENST00000561026 ZNF280CQ8ND82 737 aa19.83■□□□□ 0.76
SNX1-213ENST00000561026 RAET1EQ8TD07 263 aa19.83■□□□□ 0.76
SNX1-213ENST00000561026 TBC1D2Q9BYX2 928 aa19.83■□□□□ 0.76
SNX1-213ENST00000561026 MYPNQ86TC9 1320 aa19.82■□□□□ 0.76
SNX1-213ENST00000561026 PHIPQ8WWQ0 1821 aa19.82■□□□□ 0.76
SNX1-213ENST00000561026 MS4A1P11836 297 aa19.82■□□□□ 0.76
SNX1-213ENST00000561026 MAPKAPK5Q8IW41 473 aa19.82■□□□□ 0.76
SNX1-213ENST00000561026 PROCA1Q8NCQ7 364 aaPredicted RBP19.82■□□□□ 0.76
SNX1-213ENST00000561026 SMCR8Q8TEV9 937 aaPredicted RBP19.82■□□□□ 0.76
SNX1-213ENST00000561026 FLT1P17948 1338 aa19.81■□□□□ 0.76
SNX1-213ENST00000561026 USP17L5A8MUK1 530 aa19.81■□□□□ 0.76
SNX1-213ENST00000561026 IDH1O75874 414 aaKnown RBP19.81■□□□□ 0.76
SNX1-213ENST00000561026 CYP7A1P22680 504 aa19.81■□□□□ 0.76
SNX1-213ENST00000561026 GRK4P32298 578 aa19.81■□□□□ 0.76
SNX1-213ENST00000561026 PRKCZQ05513 592 aa19.81■□□□□ 0.76
SNX1-213ENST00000561026 TREML2Q5T2D2 321 aa19.81■□□□□ 0.76
SNX1-213ENST00000561026 AACSQ86V21 672 aa19.81■□□□□ 0.76
SNX1-213ENST00000561026 METTL16Q86W50 562 aaKnown RBP19.81■□□□□ 0.76
SNX1-213ENST00000561026 FOXP4Q8IVH2 680 aaPredicted RBP19.81■□□□□ 0.76
SNX1-213ENST00000561026 PTPRFP10586 1907 aa19.8■□□□□ 0.76
SNX1-213ENST00000561026 HSP90AB4PQ58FF6 505 aa19.8■□□□□ 0.76
SNX1-213ENST00000561026 PALD1Q9ULE6 856 aa19.8■□□□□ 0.76
SNX1-213ENST00000561026 MAST2Q6P0Q8 1798 aa19.79■□□□□ 0.76
SNX1-213ENST00000561026 HMGCS2P54868 508 aa19.79■□□□□ 0.76
SNX1-213ENST00000561026 DYNLL1P63167 89 aaKnown RBP19.79■□□□□ 0.76
SNX1-213ENST00000561026 MTFR1Q15390 333 aa19.79■□□□□ 0.76
SNX1-213ENST00000561026 DNAJC18Q9H819 358 aa19.79■□□□□ 0.76
SNX1-213ENST00000561026 PNMA3Q9UL41 463 aa19.79■□□□□ 0.76
SNX1-213ENST00000561026 NDUFB9Q9Y6M9 179 aa19.79■□□□□ 0.76
SNX1-213ENST00000561026 ASNSP08243 561 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 SH3D19Q5HYK7 790 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 RPAP2Q8IXW5 612 aaPredicted RBP19.78■□□□□ 0.76
SNX1-213ENST00000561026 ANKRD13CQ8N6S4 541 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 MAGEB6Q8N7X4 407 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 RHPN1Q8TCX5 695 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 WDR18Q9BV38 432 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 ANTXR1Q9H6X2 564 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 AS3MTQ9HBK9 375 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 IL1RAPL2Q9NP60 686 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 GABRQQ9UN88 632 aa19.78■□□□□ 0.76
SNX1-213ENST00000561026 JAG1P78504 1218 aa19.77■□□□□ 0.76
SNX1-213ENST00000561026 MAP3K12Q12852 859 aa19.77■□□□□ 0.76
SNX1-213ENST00000561026 TMED8Q6PL24 325 aaPredicted RBP19.77■□□□□ 0.76
SNX1-213ENST00000561026 CERS3Q8IU89 383 aa19.77■□□□□ 0.76
SNX1-213ENST00000561026 CRACR2BQ8N4Y2 399 aaPredicted RBP19.77■□□□□ 0.76
SNX1-213ENST00000561026 MIGA1Q8NAN2 632 aa19.77■□□□□ 0.76
SNX1-213ENST00000561026 TRIM34Q9BYJ4 488 aa19.77■□□□□ 0.76
SNX1-213ENST00000561026 ZBTB40Q9NUA8 1239 aa19.77■□□□□ 0.76
SNX1-213ENST00000561026 SAP30BPQ9UHR5 308 aaKnown RBP19.77■□□□□ 0.76
SNX1-213ENST00000561026 MYO5AQ9Y4I1 1855 aaKnown RBP19.77■□□□□ 0.76
SNX1-213ENST00000561026 FLT3LGP49771 235 aa19.76■□□□□ 0.75
SNX1-213ENST00000561026 PABPC4Q13310 644 aaKnown RBP eCLIP19.76■□□□□ 0.75
SNX1-213ENST00000561026 BIN2Q9UBW5 565 aaPredicted RBP19.76■□□□□ 0.75
SNX1-213ENST00000561026 DDX19BQ9UMR2 479 aa19.76■□□□□ 0.75
SNX1-213ENST00000561026 COG6Q9Y2V7 657 aa19.76■□□□□ 0.75
SNX1-213ENST00000561026 TNPO2O14787 897 aaKnown RBP19.75■□□□□ 0.75
SNX1-213ENST00000561026 HLA-DOAP06340 250 aa19.75■□□□□ 0.75
SNX1-213ENST00000561026 GCLCP48506 637 aaPredicted RBP19.75■□□□□ 0.75
SNX1-213ENST00000561026 BACE1P56817 501 aa19.75■□□□□ 0.75
SNX1-213ENST00000561026 FAM110CQ1W6H9 321 aa19.75■□□□□ 0.75
SNX1-213ENST00000561026 SIRT2Q8IXJ6 389 aa19.75■□□□□ 0.75
SNX1-213ENST00000561026 SLAIN1Q8ND83 568 aa19.75■□□□□ 0.75
SNX1-213ENST00000561026 GINM1Q9NU53 330 aa19.75■□□□□ 0.75
SNX1-213ENST00000561026 SIPA1L1O43166 1804 aa19.75■□□□□ 0.75
SNX1-213ENST00000561026 HMMRO75330 724 aa19.74■□□□□ 0.75
SNX1-213ENST00000561026 CCL5P13501 91 aa19.74■□□□□ 0.75
SNX1-213ENST00000561026 UBXN2AP68543 259 aa19.74■□□□□ 0.75
SNX1-213ENST00000561026 MTMR2Q13614 643 aa19.74■□□□□ 0.75
SNX1-213ENST00000561026 CLASRPQ8N2M8 674 aaKnown RBP19.74■□□□□ 0.75
SNX1-213ENST00000561026 NKX2-3Q8TAU0 364 aa19.74■□□□□ 0.75
SNX1-213ENST00000561026 KIF1BPQ96EK5 621 aa19.74■□□□□ 0.75
SNX1-213ENST00000561026 ASCC2Q9H1I8 757 aaPredicted RBP19.74■□□□□ 0.75
SNX1-213ENST00000561026 ATAD5Q96QE3 1844 aa19.73■□□□□ 0.75
SNX1-213ENST00000561026 ADCY3O60266 1144 aa19.73■□□□□ 0.75
SNX1-213ENST00000561026 GJB1P08034 283 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms