RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 RBSNQ9H1K0 784 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 SLKQ9H2G2 1235 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 C11orf16Q9NQ32 467 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 EGFL7Q9UHF1 273 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 POLG2Q9UHN1 485 aa5.41□□□□□ -1.54
HMGB3P26-201ENST00000560051 COL17A1Q9UMD9 1497 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 TMEM238LA0A1B0GVL6 79 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 FAM196BA6NMK8 535 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 IPO5O00410 1097 aaKnown RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 PES1O00541 588 aaKnown RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 RPN1P04843 607 aaKnown RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 YBX3P16989 372 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 EIF2AK2P19525 551 aaKnown RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 FSTP19883 344 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 ARID5AQ03989 594 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 PERM1Q5SV97 790 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 CCDC70Q6NSX1 233 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 LARP1Q6PKG0 1096 aaKnown RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 NFXL1Q6ZNB6 911 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 FAM43AQ8N2R8 423 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 MNS1Q8NEH6 495 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 TRPM4Q8TD43 1214 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 SLC39A13Q96H72 371 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 CDHR1Q96JP9 859 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 MEGF10Q96KG7 1140 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 IWS1Q96ST2 819 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 IER2Q9BTL4 223 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 SMG9Q9H0W8 520 aaKnown RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 METTL5Q9NRN9 209 aaKnown RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 FAM13BQ9NYF5 915 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 DDX41Q9UJV9 622 aaKnown RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 RABGAP1Q9Y3P9 1069 aa5.4□□□□□ -1.54
HMGB3P26-201ENST00000560051 FANCIQ9NVI1 1328 aa5.4□□□□□ -1.55
HMGB3P26-201ENST00000560051 RAD54L2Q9Y4B4 1467 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 CTAGE5O15320 804 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 IPO8O15397 1037 aaKnown RBP5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 C21orf2O43822 256 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 DKK1O94907 266 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 FAM163BP0C2L3 166 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 ZNF76P36508 570 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 IDH3AP50213 366 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 ARSDP51689 593 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 TERF1P54274 439 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 GPLD1P80108 840 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 MLLT1Q03111 559 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 FAM160A1Q05DH4 1040 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 TMEM95Q3KNT9 176 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 ILDR2Q71H61 639 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 MCF2L2Q86YR7 1114 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 GLYCTKQ8IVS8 523 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 FAM200AQ8TCP9 573 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 SMARCC1Q92922 1105 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 SYAP1Q96A49 352 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 MRFAP1L1Q96HT8 127 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 CDK5RAP3Q96JB5 506 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 MPHOSPH6Q99547 160 aaKnown RBP5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 MUC3BQ9H195 1237 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 SRA1Q9HD15 236 aaKnown RBP5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 RNF19AQ9NV58 838 aa5.39□□□□□ -1.55
HMGB3P26-201ENST00000560051 TBX3O15119 743 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 SASH3O75995 380 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 IPO7O95373 1038 aaKnown RBP5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 GHRHP01286 108 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 MYL1P05976 194 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 NBPF7P0C2Y1 421 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 SETSIPP0DME0 302 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 TARSP26639 723 aaKnown RBP5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 GNALP38405 381 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 USP5P45974 858 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 WASHC5Q12768 1159 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 PTK7Q13308 1070 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 TRIM29Q14134 588 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 TAF11Q15544 211 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 ALDH1L2Q3SY69 923 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 CCDC158Q5M9N0 1113 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 DNTTIP2Q5QJE6 756 aaKnown RBP5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 MAP4K3Q8IVH8 894 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 RAVER1Q8IY67 606 aaKnown RBP5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 RGL4Q8IZJ4 473 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 TMEM130Q8N3G9 435 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 RNPC3Q96LT9 517 aaKnown RBP5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 TSPYL1Q9H0U9 437 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 IKBKGQ9Y6K9 419 aa5.38□□□□□ -1.55
HMGB3P26-201ENST00000560051 A0A1W2PRQ8 180 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 DLL1O00548 723 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 TNFRSF10BO14763 440 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 RNASEH2AO75792 299 aaKnown RBP5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 PSAPP07602 524 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 CCDC175P0C221 793 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 GLB1P16278 677 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 PSMA3P25788 255 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 INPP5BP32019 993 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 PDE6BP35913 854 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 ZNF131P52739 623 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 NRLP54845 237 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 NAP1L1P55209 391 aaKnown RBP5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 ARHGAP4P98171 946 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 GRIK5Q16478 980 aa5.37□□□□□ -1.55
HMGB3P26-201ENST00000560051 PLEKHG4Q58EX7 1191 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms