RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 IRF5Q13568 498 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 PXYLP1Q8TE99 480 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 TRIM75PA6NK02 468 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 PICALMQ13492 652 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 ZNF384Q8TF68 577 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 DEFB118Q96PH6 123 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 MEIS3Q99687 375 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 ABCF2Q9UG63 623 aa13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 BTDP43251 543 aa13.73□□□□□ -0.21
RABGGTA-204ENST00000558376 RHBDL3P58872 404 aa13.73□□□□□ -0.21
RABGGTA-204ENST00000558376 TREML2Q5T2D2 321 aa13.73□□□□□ -0.21
RABGGTA-204ENST00000558376 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-204ENST00000558376 DZIP1Q86YF9 867 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-204ENST00000558376 COPRSQ9NQ92 184 aa13.73□□□□□ -0.21
RABGGTA-204ENST00000558376 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 SOX1O00570 391 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 AAMPQ13685 434 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 ZGPATQ8N5A5 531 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 ANKRD13CQ8N6S4 541 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 SMCR8Q8TEV9 937 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 CRISPLD2Q9H0B8 497 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 PAK6Q9NQU5 681 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 AGTPBP1Q9UPW5 1226 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 GPR75-ASB3A0A0A6YYF3 556 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 SIRT2Q8IXJ6 389 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 RWDD1Q9H446 243 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 STAP2Q9UGK3 403 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 MROH7-TTC4A0A0A0MT08 1334 aa13.72□□□□□ -0.21
RABGGTA-204ENST00000558376 TBC1D12O60347 775 aa13.71□□□□□ -0.21
RABGGTA-204ENST00000558376 EVI5O60447 810 aa13.71□□□□□ -0.21
RABGGTA-204ENST00000558376 MECOMQ03112 1051 aa13.71□□□□□ -0.21
RABGGTA-204ENST00000558376 RRP1BQ14684 758 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-204ENST00000558376 DIS3LQ8TF46 1054 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-204ENST00000558376 XAGE2Q96GT9 111 aa13.71□□□□□ -0.21
RABGGTA-204ENST00000558376 PAWRQ96IZ0 340 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-204ENST00000558376 PDS5AQ29RF7 1337 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-204ENST00000558376 ATAD5Q96QE3 1844 aa13.71□□□□□ -0.22
RABGGTA-204ENST00000558376 SPP2Q13103 211 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 COA7Q96BR5 231 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 PLXNB2O15031 1838 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 LOC285556D6RIA3 1793 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 A0A1B0GUL7 405 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 TFCP2Q12800 502 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 ERICH6Q7L0X2 663 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 LRCH3Q96II8 777 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 GJD2Q9UKL4 321 aa13.7□□□□□ -0.22
RABGGTA-204ENST00000558376 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-204ENST00000558376 CAPN2P17655 700 aa13.69□□□□□ -0.22
RABGGTA-204ENST00000558376 TRIM32Q13049 653 aa13.69□□□□□ -0.22
RABGGTA-204ENST00000558376 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
RABGGTA-204ENST00000558376 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
RABGGTA-204ENST00000558376 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.69□□□□□ -0.22
RABGGTA-204ENST00000558376 HMG20BQ9P0W2 317 aa13.69□□□□□ -0.22
RABGGTA-204ENST00000558376 LAMA3Q16787 3333 aa13.68□□□□□ -0.22
RABGGTA-204ENST00000558376 A0A1W2PPC1 479 aa13.68□□□□□ -0.22
RABGGTA-204ENST00000558376 PI16Q6UXB8 463 aa13.68□□□□□ -0.22
RABGGTA-204ENST00000558376 PROCA1Q8NCQ7 364 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-204ENST00000558376 OSBPL5Q9H0X9 879 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-204ENST00000558376 COL6A3P12111 3177 aa13.68□□□□□ -0.22
RABGGTA-204ENST00000558376 MNX1P50219 401 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 HMGCS2P54868 508 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 HDAC1Q13547 482 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 ZNF280CQ8ND82 737 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 NSUN4Q96CB9 384 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 PNMA3Q9UL41 463 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 CUL9Q8IWT3 2517 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 CAP2P40123 477 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 GCLCP48506 637 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 SLC17A8Q8NDX2 589 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 ASCC2Q9H1I8 757 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 CHMP4BQ9H444 224 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 HDAC5Q9UQL6 1122 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 AKAP2Q9Y2D5 859 aa13.67□□□□□ -0.22
RABGGTA-204ENST00000558376 SIPA1L1O43166 1804 aa13.66□□□□□ -0.22
RABGGTA-204ENST00000558376 PEX10O60683 326 aa13.66□□□□□ -0.22
RABGGTA-204ENST00000558376 NEUROD6Q96NK8 337 aa13.66□□□□□ -0.22
RABGGTA-204ENST00000558376 GDF15Q99988 308 aa13.66□□□□□ -0.22
RABGGTA-204ENST00000558376 A0A0C4DFX4 3053 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 USP17L5A8MUK1 530 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 SRGAP3O43295 1099 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 HMGCRP04035 888 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 LDHCP07864 332 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 JAG1P78504 1218 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 C7orf61Q8IZ16 206 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 SPATA5Q8NB90 893 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 BCL11AQ9H165 835 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 ZMYND8Q9ULU4 1186 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 DDX60LQ5H9U9 1706 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 COL2A1P02458 1487 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 DLL1O00548 723 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms