RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 RPS6KA2Q15349 733 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 NUDCD1Q96RS6 583 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 EXOC1Q9NV70 894 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 CFAP157Q5JU67 520 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 FAM47EQ6ZV65 393 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 CFAP61Q8NHU2 1237 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 PMS1P54277 932 aaKnown RBP4.1□□□□□ -1.75
ATXN3-248ENST00000558190 HDGFL1Q5TGJ6 251 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 FOXR1Q6PIV2 292 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 ARHGAP18Q8N392 663 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 SPZ1Q9BXG8 430 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC105Q8IYK2 499 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 INTS9Q9NV88 658 aaKnown RBP4.1□□□□□ -1.75
ATXN3-248ENST00000558190 PSMA7O14818 248 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 SLC27A2O14975 620 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 ATP5HO75947 161 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 PDE6AP16499 860 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 NCBP1Q09161 790 aaKnown RBP4.1□□□□□ -1.75
ATXN3-248ENST00000558190 MAGOHBQ96A72 148 aaKnown RBP4.1□□□□□ -1.75
ATXN3-248ENST00000558190 ZBTB10Q96DT7 871 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 ARHGEF9O43307 516 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 STX10O60499 249 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 ASIC1P78348 528 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 TADA2BQ86TJ2 420 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 SERPINB6P35237 376 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 CYP27A1Q02318 531 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 CCT6BQ92526 530 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 KRT13P13646 458 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 HIC2Q96JB3 615 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 ECT2Q9H8V3 914 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 VPS37BQ9H9H4 285 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 BATF3Q9NR55 127 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 HMG20BQ9P0W2 317 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 LCMT1Q9UIC8 334 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC169A6NNP5 214 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 LONP1P36776 959 aaKnown RBP4.1□□□□□ -1.75
ATXN3-248ENST00000558190 IWS1Q96ST2 819 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 HELLSQ9NRZ9 838 aa4.1□□□□□ -1.75
ATXN3-248ENST00000558190 ZWINTO95229 277 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 DTHD1Q6ZMT9 781 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 ADAT2Q7Z6V5 191 aaKnown RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 IFIT1P09914 478 aaKnown RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 FAM200BP0CF97 657 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 MAP3K12Q12852 859 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 NFU1Q9UMS0 254 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 SMTNP53814 917 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 TDRD12Q587J7 1177 aaKnown RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 ABTB2Q8N961 1025 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC51Q96ER9 411 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 ZFXP17010 805 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 TRIM6Q9C030 488 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 TRAF3IP3Q9Y228 551 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 RASGRF2O14827 1237 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 SIX5Q8N196 739 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 MYO1FO00160 1098 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 P3H4Q92791 437 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 Q9H521 79 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 HAUS2Q9NVX0 235 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 KRT15P19012 456 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 IL9RQ01113 521 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 UAP1Q16222 522 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 CLIC6Q96NY7 704 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 FTOQ9C0B1 505 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 HOMER3Q9NSC5 361 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 AATFQ9NY61 560 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 EXOC5O00471 708 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 CUL5Q93034 780 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 SLC4A4Q9Y6R1 1079 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 GOLGA8AA7E2F4 631 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 GOLGA8BA8MQT2 603 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 RNPEPQ9H4A4 650 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 ABCF2Q9UG63 623 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 TRIM35Q9UPQ4 493 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 MAP3K2Q9Y2U5 619 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 SNX1Q13596 522 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 SREK1Q8WXA9 508 aaKnown RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 EPN3Q9H201 632 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 ZSWIM6Q9HCJ5 1215 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 CHMP2BQ9UQN3 213 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 N4BP1O75113 896 aaKnown RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 PTH1RQ03431 593 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 AP1M1Q9BXS5 423 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 TBC1D7Q9P0N9 293 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 KCNK3O14649 394 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 BMP15O95972 392 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 CTNNA1P35221 906 aaKnown RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 PNOCQ13519 176 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 RRS1Q15050 365 aaKnown RBP4.09□□□□□ -1.75
ATXN3-248ENST00000558190 GRAMD4Q6IC98 578 aa4.09□□□□□ -1.75
ATXN3-248ENST00000558190 DENND2CQ68D51 928 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 ANKRD13DQ6ZTN6 518 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 CNGA4Q8IV77 575 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 SMARCC2Q8TAQ2 1214 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 ACTR5Q9H9F9 607 aaPredicted RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 RPL13P26373 211 aaKnown RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 NAA16Q6N069 864 aaPredicted RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 MAP7D3Q8IWC1 876 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 FNBP4Q8N3X1 1017 aaPredicted RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 CXorf38Q8TB03 319 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 NSL1Q96IY1 281 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms