RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZNF333Q96JL9 665 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 AATFQ9NY61 560 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNX6-210ENST00000557341 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
SNX6-210ENST00000557341 ZAP70P43403 619 aa17.34■□□□□ 0.37
SNX6-210ENST00000557341 GPAT2Q6NUI2 795 aa17.34■□□□□ 0.37
SNX6-210ENST00000557341 ERC1Q8IUD2 1116 aa17.34■□□□□ 0.37
SNX6-210ENST00000557341 DOCK3Q8IZD9 2030 aa17.34■□□□□ 0.37
SNX6-210ENST00000557341 HERC5Q9UII4 1024 aaKnown RBP17.34■□□□□ 0.37
SNX6-210ENST00000557341 TRIM75PA6NK02 468 aa17.33■□□□□ 0.36
SNX6-210ENST00000557341 PSMC4P43686 418 aa17.33■□□□□ 0.36
SNX6-210ENST00000557341 EAF2Q96CJ1 260 aaPredicted RBP17.33■□□□□ 0.36
SNX6-210ENST00000557341 TMEM106CQ9BVX2 250 aa17.33■□□□□ 0.36
SNX6-210ENST00000557341 CCDC8Q9H0W5 538 aaPredicted RBP17.33■□□□□ 0.36
SNX6-210ENST00000557341 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.33■□□□□ 0.36
SNX6-210ENST00000557341 EXOC6BQ9Y2D4 811 aa17.33■□□□□ 0.36
SNX6-210ENST00000557341 SLC45A1Q9Y2W3 748 aa17.33■□□□□ 0.36
SNX6-210ENST00000557341 FLT1P17948 1338 aa17.32■□□□□ 0.36
SNX6-210ENST00000557341 ECM2O94769 699 aaPredicted RBP17.32■□□□□ 0.36
SNX6-210ENST00000557341 CYP2C8P10632 490 aa17.32■□□□□ 0.36
SNX6-210ENST00000557341 ADGRA1Q86SQ6 560 aa17.32■□□□□ 0.36
SNX6-210ENST00000557341 TRIM47Q96LD4 638 aa17.32■□□□□ 0.36
SNX6-210ENST00000557341 TBC1D2Q9BYX2 928 aa17.32■□□□□ 0.36
SNX6-210ENST00000557341 DHX36Q9H2U1 1008 aaKnown RBP17.32■□□□□ 0.36
SNX6-210ENST00000557341 PIH1D3Q9NQM4 214 aaKnown RBP17.32■□□□□ 0.36
SNX6-210ENST00000557341 FMNL1O95466 1100 aaPredicted RBP17.31■□□□□ 0.36
SNX6-210ENST00000557341 BCRP11274 1271 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 HOXD10P28358 340 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 CTGFP29279 349 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 PPP4CP60510 307 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 HSP90AB4PQ58FF6 505 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 CCDC84Q86UT8 332 aaPredicted RBP17.31■□□□□ 0.36
SNX6-210ENST00000557341 SH3TC2Q8TF17 1288 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 PI4KBQ9UBF8 816 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 SRRDQ9UH36 339 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 AGTPBP1Q9UPW5 1226 aa17.31■□□□□ 0.36
SNX6-210ENST00000557341 MYPNQ86TC9 1320 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 IDH1O75874 414 aaKnown RBP17.3■□□□□ 0.36
SNX6-210ENST00000557341 OSBPP22059 807 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 CAP2P40123 477 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 FCGRTP55899 365 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 AACSQ86V21 672 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 MAPKAPK5Q8IW41 473 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 PROCA1Q8NCQ7 364 aaPredicted RBP17.3■□□□□ 0.36
SNX6-210ENST00000557341 SMCR8Q8TEV9 937 aaPredicted RBP17.3■□□□□ 0.36
SNX6-210ENST00000557341 TGFBRAP1Q8WUH2 860 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 PNMA3Q9UL41 463 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
SNX6-210ENST00000557341 EN2P19622 333 aaPredicted RBP17.29■□□□□ 0.36
SNX6-210ENST00000557341 SLC4A8Q2Y0W8 1093 aa17.29■□□□□ 0.36
SNX6-210ENST00000557341 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
SNX6-210ENST00000557341 ZNF280CQ8ND82 737 aa17.29■□□□□ 0.36
SNX6-210ENST00000557341 RAET1EQ8TD07 263 aa17.29■□□□□ 0.36
SNX6-210ENST00000557341 PLXNB2O15031 1838 aa17.28■□□□□ 0.36
SNX6-210ENST00000557341 BAZ2AQ9UIF9 1905 aaKnown RBP17.28■□□□□ 0.36
SNX6-210ENST00000557341 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
SNX6-210ENST00000557341 HMMRO75330 724 aa17.28■□□□□ 0.36
SNX6-210ENST00000557341 CYP7A1P22680 504 aa17.28■□□□□ 0.36
SNX6-210ENST00000557341 CRACR2BQ8N4Y2 399 aaPredicted RBP17.28■□□□□ 0.36
SNX6-210ENST00000557341 TRIM34Q9BYJ4 488 aa17.28■□□□□ 0.36
SNX6-210ENST00000557341 AS3MTQ9HBK9 375 aa17.28■□□□□ 0.36
SNX6-210ENST00000557341 SLC34A2O95436 690 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 MYCP01106 439 aaPredicted RBP17.27■□□□□ 0.36
SNX6-210ENST00000557341 HLA-DOAP06340 250 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 ASNSP08243 561 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 SPP2Q13103 211 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 RRP1BQ14684 758 aaKnown RBP17.27■□□□□ 0.36
SNX6-210ENST00000557341 TREML2Q5T2D2 321 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 TMED8Q6PL24 325 aaPredicted RBP17.27■□□□□ 0.36
SNX6-210ENST00000557341 RPAP2Q8IXW5 612 aaPredicted RBP17.27■□□□□ 0.36
SNX6-210ENST00000557341 MAGEB6Q8N7X4 407 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 RHPN1Q8TCX5 695 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 IL1RAPL2Q9NP60 686 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 NDUFB9Q9Y6M9 179 aa17.27■□□□□ 0.36
SNX6-210ENST00000557341 GRK4P32298 578 aa17.26■□□□□ 0.35
SNX6-210ENST00000557341 HMGCS2P54868 508 aa17.26■□□□□ 0.35
SNX6-210ENST00000557341 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
SNX6-210ENST00000557341 PRKCZQ05513 592 aa17.26■□□□□ 0.35
SNX6-210ENST00000557341 MAP3K12Q12852 859 aa17.26■□□□□ 0.35
SNX6-210ENST00000557341 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX6-210ENST00000557341 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
SNX6-210ENST00000557341 CHMP4BQ9H444 224 aaKnown RBP17.26■□□□□ 0.35
SNX6-210ENST00000557341 DNAJC18Q9H819 358 aa17.26■□□□□ 0.35
SNX6-210ENST00000557341 RCAN3Q9UKA8 241 aa17.26■□□□□ 0.35
SNX6-210ENST00000557341 PALD1Q9ULE6 856 aa17.26■□□□□ 0.35
SNX6-210ENST00000557341 TTF1Q15361 905 aaPredicted RBP17.25■□□□□ 0.35
SNX6-210ENST00000557341 METTL16Q86W50 562 aaKnown RBP17.25■□□□□ 0.35
SNX6-210ENST00000557341 FOXP4Q8IVH2 680 aaPredicted RBP17.25■□□□□ 0.35
SNX6-210ENST00000557341 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
SNX6-210ENST00000557341 MIGA1Q8NAN2 632 aa17.25■□□□□ 0.35
SNX6-210ENST00000557341 ANTXR1Q9H6X2 564 aa17.25■□□□□ 0.35
SNX6-210ENST00000557341 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
SNX6-210ENST00000557341 SAP30BPQ9UHR5 308 aaKnown RBP17.25■□□□□ 0.35
SNX6-210ENST00000557341 APBB1O00213 710 aa17.24■□□□□ 0.35
SNX6-210ENST00000557341 TNPO2O14787 897 aaKnown RBP17.24■□□□□ 0.35
SNX6-210ENST00000557341 USP5P45974 858 aa17.24■□□□□ 0.35
SNX6-210ENST00000557341 FAM110CQ1W6H9 321 aa17.24■□□□□ 0.35
SNX6-210ENST00000557341 SH3D19Q5HYK7 790 aa17.24■□□□□ 0.35
SNX6-210ENST00000557341 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
SNX6-210ENST00000557341 SLAIN1Q8ND83 568 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms